Date: Sat, 5 Jan 2008 22:30:49 +0800 From: "Rong-en Fan" <grafan@gmail.com> To: dikshie <dikshie@gmail.com> Cc: freebsd-ports@freebsd.org Subject: Re: update R from 2.2.0 to 2.6.0 always fail Message-ID: <6eb82e0801050630p4b6ba167vf544ed8597affbe8@mail.gmail.com> In-Reply-To: <910e60e80801041500x5295cde3sfa48e87f977baf48@mail.gmail.com> References: <910e60e80801041500x5295cde3sfa48e87f977baf48@mail.gmail.com>
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On Jan 5, 2008 7:00 AM, dikshie <dikshie@gmail.com> wrote: > i try several times to update math/R from 2.2.0 to 2.6.0 > but always fail in this step: > > gfortran42 -fpic -g -O2 -c xxxpr.f -o xxxpr.o > cc -std=gnu99 -shared -L/usr/local/lib -o libR.so CConverters.o CommandLineArgs > .o Rdynload.o Renviron.o RNG.o apply.o arithmetic.o apse.o array.o attrib.o base > .o bind.o builtin.o character.o coerce.o colors.o complex.o connections.o contex > t.o cov.o cum.o dcf.o datetime.o debug.o deparse.o deriv.o dotcode.o dounzip.o d > struct.o duplicate.o engine.o envir.o errors.o eval.o format.o fourier.o gevents > .o gram.o gram-ex.o graphics.o identical.o inlined.o internet.o iosupport.o lapa > ck.o list.o localecharset.o logic.o main.o mapply.o match.o memory.o model.o nam > es.o objects.o optim.o optimize.o options.o par.o paste.o pcre.o platform.o plot > .o plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o qsort.o r > andom.o regex.o registration.o relop.o rlocale.o saveload.o scan.o seq.o seriali > ze.o size.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o > subset.o summary.o sysutils.o unique.o util.o version.o vfonts.o xxxpr.o `ls ../ > appl/*.o ../nmath/*.o ../unix/*.o 2>/dev/null|grep -v /ext-` -lblas -L/usr/loca > l/lib/gcc-4.2.3/gcc/i386-portbld-freebsd7.0/4.2.3 -L/usr/local/lib/gcc-4.2.3 -lg > fortran -lm -lgcc_s /usr/local/lib/libintl.so /usr/local/lib/libiconv.so - > Wl,-rpath -Wl,/usr/local/lib -lreadline -lpcre -lbz2 -lz -lm -liconv > mkdir /usr/ports/math/R/work/R-2.6.0/bin/exec > mkdir /usr/ports/math/R/work/R-2.6.0/lib > cc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/incl > ude -DHAVE_CONFIG_H -fpic -O2 -fno-strict-aliasing -pipe -c Rmain.c -o Rmain.o > cc -std=gnu99 -export-dynamic -L/usr/local/lib -o R.bin Rmain.o -L../../lib -lR > Rmain.o(.text+0x5b): In function `main': > : undefined reference to `R_running_as_main_program' [...] This is a known issue of R. Please remove R 2.2 before upgrading. Regards, Rong-En Fan > > any hints ? > > > regards, > > -- > -dikshie- > _______________________________________________ > freebsd-ports@freebsd.org mailing list > http://lists.freebsd.org/mailman/listinfo/freebsd-ports > To unsubscribe, send any mail to "freebsd-ports-unsubscribe@freebsd.org" >
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