Date: Sun, 24 Mar 2013 16:27:23 +0000 (UTC) From: Martin Wilke <miwi@FreeBSD.org> To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r315145 - head/science/gromacs Message-ID: <201303241627.r2OGRN3a038883@svn.freebsd.org>
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Author: miwi Date: Sun Mar 24 16:27:23 2013 New Revision: 315145 URL: http://svnweb.freebsd.org/changeset/ports/315145 Log: - Update to 4.6.1 PR: 177243 Submitted by: ports fury Modified: head/science/gromacs/Makefile head/science/gromacs/distinfo head/science/gromacs/pkg-plist Modified: head/science/gromacs/Makefile ============================================================================== --- head/science/gromacs/Makefile Sun Mar 24 16:24:56 2013 (r315144) +++ head/science/gromacs/Makefile Sun Mar 24 16:27:23 2013 (r315145) @@ -2,7 +2,7 @@ # $FreeBSD$ PORTNAME= gromacs -PORTVERSION= 4.6 +PORTVERSION= 4.6.1 CATEGORIES= science MASTER_SITES= ftp://ftp.gromacs.org/pub/gromacs/ @@ -22,10 +22,10 @@ GSL_DESC= Extra analysis using math/gsl MPICH_DESC= MPI support using net/mpich2 OMPI_DESC= MPI support using net/openmpi +USES= cmake USE_FORTRAN= yes USE_PERL5= yes USE_PKGCONFIG= build -USES= cmake CMAKE_ARGS= -DBLAS_LIBRARIES:FILEPATH="${BLAS_LIBS}" \ -DLAPACK_LIBRARIES:FILEPATH="${LAPACK_LIBS}" USE_LDCONFIG= yes @@ -127,7 +127,7 @@ post-patch: @${FIND} ${WRKSRC} -name "CMakeLists.txt" | ${XARGS} \ ${REINPLACE_CMD} -e \ 's|share/man|man| ; \ - s|-lpthread|${PTHREAD_LIBS}| ; \ + s|-lpthread|-pthread| ; \ /pkgconfig/s|LIB_INSTALL_DIR}|CMAKE_INSTALL_PREFIX}/libdata|' @${FIND} ${WRKSRC} -name "GMXRC.*" | ${XARGS} ${REINPLACE_CMD} -e \ 's|LDLIB/pkgconfig|LDLIB/../libdata/pkgconfig| ; \ Modified: head/science/gromacs/distinfo ============================================================================== --- head/science/gromacs/distinfo Sun Mar 24 16:24:56 2013 (r315144) +++ head/science/gromacs/distinfo Sun Mar 24 16:27:23 2013 (r315145) @@ -1,2 +1,2 @@ -SHA256 (gromacs-4.6.tar.gz) = f695ea814b10cb9afa8d69241fed703c6e20156bab96ed4b25f817ad85a8dbde -SIZE (gromacs-4.6.tar.gz) = 10098687 +SHA256 (gromacs-4.6.1.tar.gz) = a0514b2a04ecac7461a67fc8edefa2b8eeaf22a25cd61c3348042dd077b077e6 +SIZE (gromacs-4.6.1.tar.gz) = 9975315 Modified: head/science/gromacs/pkg-plist ============================================================================== --- head/science/gromacs/pkg-plist Sun Mar 24 16:24:56 2013 (r315144) +++ head/science/gromacs/pkg-plist Sun Mar 24 16:27:23 2013 (r315145) @@ -343,13 +343,13 @@ include/gromacs/xdrf.h include/gromacs/xtcio.h include/gromacs/xvgr.h lib/libgmx%%SUFFIX_MPI%%%%SUFFIX_D%%.so -lib/libgmx%%SUFFIX_MPI%%%%SUFFIX_D%%.so.6 +lib/libgmx%%SUFFIX_MPI%%%%SUFFIX_D%%.so.8 lib/libgmxana%%SUFFIX_MPI%%%%SUFFIX_D%%.so -lib/libgmxana%%SUFFIX_MPI%%%%SUFFIX_D%%.so.6 +lib/libgmxana%%SUFFIX_MPI%%%%SUFFIX_D%%.so.8 lib/libgmxpreprocess%%SUFFIX_MPI%%%%SUFFIX_D%%.so -lib/libgmxpreprocess%%SUFFIX_MPI%%%%SUFFIX_D%%.so.6 +lib/libgmxpreprocess%%SUFFIX_MPI%%%%SUFFIX_D%%.so.8 lib/libmd%%SUFFIX_MPI%%%%SUFFIX_D%%.so -lib/libmd%%SUFFIX_MPI%%%%SUFFIX_D%%.so.6 +lib/libmd%%SUFFIX_MPI%%%%SUFFIX_D%%.so.8 libdata/pkgconfig/libgmx%%SUFFIX_MPI%%%%SUFFIX_D%%.pc libdata/pkgconfig/libgmxana%%SUFFIX_MPI%%%%SUFFIX_D%%.pc libdata/pkgconfig/libgmxpreprocess%%SUFFIX_MPI%%%%SUFFIX_D%%.pc @@ -431,6 +431,8 @@ libdata/pkgconfig/libmd%%SUFFIX_MPI%%%%S %%DATADIR%%/html/online/g_dipoles.html %%DATADIR%%/html/online/g_disre.html %%DATADIR%%/html/online/g_dist.html +%%DATADIR%%/html/online/g_dos.html +%%DATADIR%%/html/online/g_dyecoupl.html %%DATADIR%%/html/online/g_dyndom.html %%DATADIR%%/html/online/g_enemat.html %%DATADIR%%/html/online/g_energy.html @@ -440,6 +442,8 @@ libdata/pkgconfig/libmd%%SUFFIX_MPI%%%%S %%DATADIR%%/html/online/g_hbond.html %%DATADIR%%/html/online/g_helix.html %%DATADIR%%/html/online/g_helixorient.html +%%DATADIR%%/html/online/g_hydorder.html +%%DATADIR%%/html/online/g_kinetics.html %%DATADIR%%/html/online/g_lie.html %%DATADIR%%/html/online/g_mdmat.html %%DATADIR%%/html/online/g_membed.html @@ -449,7 +453,9 @@ libdata/pkgconfig/libmd%%SUFFIX_MPI%%%%S %%DATADIR%%/html/online/g_nmeig.html %%DATADIR%%/html/online/g_nmens.html %%DATADIR%%/html/online/g_nmtraj.html +%%DATADIR%%/html/online/g_options.html %%DATADIR%%/html/online/g_order.html +%%DATADIR%%/html/online/g_pme_error.html %%DATADIR%%/html/online/g_polystat.html %%DATADIR%%/html/online/g_potential.html %%DATADIR%%/html/online/g_principal.html @@ -462,6 +468,7 @@ libdata/pkgconfig/libmd%%SUFFIX_MPI%%%%S %%DATADIR%%/html/online/g_rotacf.html %%DATADIR%%/html/online/g_rotmat.html %%DATADIR%%/html/online/g_saltbr.html +%%DATADIR%%/html/online/g_sans.html %%DATADIR%%/html/online/g_sas.html %%DATADIR%%/html/online/g_select.html %%DATADIR%%/html/online/g_sgangle.html
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