From owner-svn-ports-all@freebsd.org Mon Aug 8 11:21:05 2016 Return-Path: Delivered-To: svn-ports-all@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id 586D4BB2A32; Mon, 8 Aug 2016 11:21:05 +0000 (UTC) (envelope-from wen@FreeBSD.org) Received: from repo.freebsd.org (repo.freebsd.org [IPv6:2610:1c1:1:6068::e6a:0]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mx1.freebsd.org (Postfix) with ESMTPS id 118C11D8D; Mon, 8 Aug 2016 11:21:05 +0000 (UTC) (envelope-from wen@FreeBSD.org) Received: from repo.freebsd.org ([127.0.1.37]) by repo.freebsd.org (8.15.2/8.15.2) with ESMTP id u78BL43D035784; Mon, 8 Aug 2016 11:21:04 GMT (envelope-from wen@FreeBSD.org) Received: (from wen@localhost) by repo.freebsd.org (8.15.2/8.15.2/Submit) id u78BL4m5035782; Mon, 8 Aug 2016 11:21:04 GMT (envelope-from wen@FreeBSD.org) Message-Id: <201608081121.u78BL4m5035782@repo.freebsd.org> X-Authentication-Warning: repo.freebsd.org: wen set sender to wen@FreeBSD.org using -f From: Wen Heping Date: Mon, 8 Aug 2016 11:21:04 +0000 (UTC) To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r419818 - head/biology/pycogent X-SVN-Group: ports-head MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit X-BeenThere: svn-ports-all@freebsd.org X-Mailman-Version: 2.1.22 Precedence: list List-Id: SVN commit messages for the ports tree List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 08 Aug 2016 11:21:05 -0000 Author: wen Date: Mon Aug 8 11:21:04 2016 New Revision: 419818 URL: https://svnweb.freebsd.org/changeset/ports/419818 Log: - Update to 1.9 [1] - Moved to github [1] - Depend on newer sqlalchemy10 [1] - Update pkg-descr and WWW [1] - Limit python to -2.7 [2] - Reset maintainer to python@ for better maintain PR: 211621 Submitted by: pi@ [1], koobs@ [2] Modified: head/biology/pycogent/Makefile head/biology/pycogent/distinfo Modified: head/biology/pycogent/Makefile ============================================================================== --- head/biology/pycogent/Makefile Mon Aug 8 11:18:50 2016 (r419817) +++ head/biology/pycogent/Makefile Mon Aug 8 11:21:04 2016 (r419818) @@ -2,14 +2,10 @@ # $FreeBSD$ PORTNAME= pycogent -PORTVERSION= 1.5.3 -PORTREVISION= 3 +PORTVERSION= 1.9 CATEGORIES= biology python -MASTER_SITES= SF/${PORTNAME}/PyCogent/${PORTVERSION} -DISTNAME= PyCogent-${PORTVERSION} -EXTRACT_SUFX= .tgz -MAINTAINER= wen@FreeBSD.org +MAINTAINER= python@FreeBSD.org COMMENT= Toolkit for statistical analysis of biological sequences LICENSE= GPLv2 @@ -17,10 +13,11 @@ LICENSE= GPLv2 BUILD_DEPENDS= ${PYNUMPY} \ ${LOCALBASE}/bin/cython:lang/cython \ ${LOCALBASE}/bin/sphinx-build:textproc/py-sphinx \ - ${PYTHON_PKGNAMEPREFIX}sqlalchemy06>=0.5:databases/py-sqlalchemy06 + ${PYTHON_PKGNAMEPREFIX}sqlalchemy10>=1.0.13:databases/py-sqlalchemy10 RUN_DEPENDS:= ${BUILD_DEPENDS} -USES= python +USES= python:-2.7 +USE_GITHUB= yes USE_PYTHON= distutils autoplist .include Modified: head/biology/pycogent/distinfo ============================================================================== --- head/biology/pycogent/distinfo Mon Aug 8 11:18:50 2016 (r419817) +++ head/biology/pycogent/distinfo Mon Aug 8 11:21:04 2016 (r419818) @@ -1,2 +1,3 @@ -SHA256 (PyCogent-1.5.3.tgz) = ad883cf4f8bbedd797b934a6ba75a20df2313736e84bff3d5a0e54ac41ea425c -SIZE (PyCogent-1.5.3.tgz) = 3360039 +TIMESTAMP = 1470681973 +SHA256 (pycogent-pycogent-1.9_GH0.tar.gz) = c9f56d21d764aa62e3e8a9df5a300eb7fb59e502572bec41894d21df19aeceb5 +SIZE (pycogent-pycogent-1.9_GH0.tar.gz) = 3744597