Date: Sat, 3 Nov 2018 23:16:49 +0000 (UTC) From: "Jason W. Bacon" <jwb@FreeBSD.org> To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r483953 - in head/biology/bowtie: . files Message-ID: <201811032316.wA3NGn8F073630@repo.freebsd.org>
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Author: jwb Date: Sat Nov 3 23:16:49 2018 New Revision: 483953 URL: https://svnweb.freebsd.org/changeset/ports/483953 Log: biology/bowtie: Revert previous commit with missing log message Deleted: head/biology/bowtie/files/patch-ebwt.h Modified: head/biology/bowtie/Makefile Modified: head/biology/bowtie/Makefile ============================================================================== --- head/biology/bowtie/Makefile Sat Nov 3 22:54:39 2018 (r483952) +++ head/biology/bowtie/Makefile Sat Nov 3 23:16:49 2018 (r483953) @@ -1,9 +1,9 @@ # $FreeBSD$ PORTNAME= bowtie +PORTVERSION= 1.1.2 +PORTREVISION= 6 DISTVERSIONPREFIX= v -DISTVERSION= 1.1.2 -PORTREVISION= 7 CATEGORIES= biology MAINTAINER= jwb@FreeBSD.org @@ -13,14 +13,13 @@ LICENSE= ART10 # May also work on other 64-bit platforms, but untested ONLY_FOR_ARCHS= amd64 - -USES= gmake perl5 python:run shebangfix # FIXME: bowtie-align intermittently dumps core when compiled with clang # GCC 4.2 does not provide good performance USE_GCC= yes +USES= gmake perl5 python:run shebangfix USE_PERL5= run - -SHEBANG_FILES= scripts/*.pl bowtie bowtie-build bowtie-inspect +SHEBANG_FILES= scripts/*.pl bowtie bowtie-build \ + bowtie-inspect USE_GITHUB= yes GH_ACCOUNT= BenLangmead
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