Date: Tue, 30 Jul 2019 02:34:59 GMT From: pkg-fallout@FreeBSD.org To: yuri@FreeBSD.org Cc: pkg-fallout@FreeBSD.org Subject: [exp - 112amd64-default-build-as-user][misc/adios2] Failed for adios2-2.4.0 in build Message-ID: <201907300234.x6U2YxgT095319@package19.nyi.freebsd.org>
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Maintainer: yuri@FreeBSD.org Last committer: yuri@FreeBSD.org Ident: $FreeBSD: head/misc/adios2/Makefile 507507 2019-07-28 10:26:50Z yuri $ Log URL: http://package19.nyi.freebsd.org/data/112amd64-default-build-as-user/507544/logs/adios2-2.4.0.log Build URL: http://package19.nyi.freebsd.org/build.html?mastername=112amd64-default-build-as-user&build=507544 Log: =>> Building misc/adios2 build started at Tue Jul 30 02:23:59 UTC 2019 port directory: /usr/ports/misc/adios2 package name: adios2-2.4.0 building for: FreeBSD 112amd64-default-build-as-user-job-11 11.2-RELEASE-p12 FreeBSD 11.2-RELEASE-p12 amd64 maintained by: yuri@FreeBSD.org Makefile ident: $FreeBSD: head/misc/adios2/Makefile 507507 2019-07-28 10:26:50Z yuri $ Poudriere version: 3.2.8-5-gc81843e5 Host OSVERSION: 1300031 Jail OSVERSION: 1102000 Job Id: 11 ---Begin Environment--- SHELL=/bin/csh OSVERSION=1102000 UNAME_v=FreeBSD 11.2-RELEASE-p12 UNAME_r=11.2-RELEASE-p12 BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-5-gc81843e5 MASTERMNT=/poudriere/data/.m/112amd64-default-build-as-user/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= GID=0 UID=0 PWD=/poudriere/data/.m/112amd64-default-build-as-user/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=112amd64-default-build-as-user SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/poudriere/data/.m/112amd64-default-build-as-user/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- PKG_CONFIG=pkgconf ac_cv_path_PERL=/usr/local/bin/perl ac_cv_path_PERL_PATH=/usr/local/bin/perl PERL_USE_UNSAFE_INC=1 PYTHON="/usr/local/bin/python3.6" XDG_DATA_HOME=/wrkdirs/usr/ports/misc/adios2/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/misc/adios2/work HOME=/wrkdirs/usr/ports/misc/adios2/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/misc/adios2/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/misc/adios2/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/misc/adios2/work HOME=/wrkdirs/usr/ports/misc/adios2/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/misc/adios2/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES DESTDIR=/wrkdirs/usr/ports/misc/adios2/work/stage PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- CMAKE_BUILD_TYPE="release" PYTHON_INCLUDEDIR=include/python3.6m PYTHON_LIBDIR=lib/python3.6 PYTHON_PLATFORM=freebsd11 PYTHON_SITELIBDIR=lib/python3.6/site-packages PYTHON_SUFFIX=36 PYTHON_VER=3.6 PYTHON_VERSION=python3.6 PYTHON2="@comment " PYTHON3="" OSREL=11.2 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib PERL_VERSION=5.28.2 PERL_VER=5.28 PERL5_MAN1=lib/perl5/site_perl/man/man1 PERL5_MAN3=lib/perl5/site_perl/man/man3 SITE_PERL=lib/perl5/site_perl SITE_ARCH=lib/perl5/site_perl/mach/5.28 DOCSDIR="share/doc/adios2" EXAMPLESDIR="share/examples/adios2" DATADIR="share/adios2" WWWDIR="www/adios2" ETCDIR="etc/adios2" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/adios2 DOCSDIR=/usr/local/share/doc/adios2 EXAMPLESDIR=/usr/local/share/examples/adios2 WWWDIR=/usr/local/www/adios2 ETCDIR=/usr/local/etc/adios2 --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles FORCE_PACKAGE=yes PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### /usr/local/etc/poudriere.d/make.conf #### # 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[112amd64-default-build-as-user-job-11] Extracting pkg-1.11.1: .......... done ===> adios2-2.4.0 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of adios2-2.4.0 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> License APACHE20 accepted by the user => ornladios-ADIOS2-v2.4.0_GH0.tar.gz doesn't seem to exist in /portdistfiles/. => Attempting to fetch https://codeload.github.com/ornladios/ADIOS2/tar.gz/v2.4.0?dummy=/ornladios-ADIOS2-v2.4.0_GH0.tar.gz fetch: https://codeload.github.com/ornladios/ADIOS2/tar.gz/v2.4.0?dummy=/ornladios-ADIOS2-v2.4.0_GH0.tar.gz: size unknown fetch: https://codeload.github.com/ornladios/ADIOS2/tar.gz/v2.4.0?dummy=/ornladios-ADIOS2-v2.4.0_GH0.tar.gz: size of remote file is not known ornladios-ADIOS2-v2.4.0_GH0.tar.gz 0 B 0 Bps ===> Fetching all distfiles required by adios2-2.4.0 for building =========================================================================== =======================<phase: checksum >============================ ===> License APACHE20 accepted by the user ===> Fetching all distfiles required by adios2-2.4.0 for building => SHA256 Checksum OK for ornladios-ADIOS2-v2.4.0_GH0.tar.gz. =========================================================================== =======================<phase: extract-depends>============================ =========================================================================== =======================<phase: extract >============================ ===> License APACHE20 accepted by the user ===> Fetching all distfiles required by adios2-2.4.0 for building ===> Extracting for adios2-2.4.0 => SHA256 Checksum OK for ornladios-ADIOS2-v2.4.0_GH0.tar.gz. =========================================================================== =======================<phase: patch-depends >============================ =========================================================================== =======================<phase: patch >============================ ===> Patching for adios2-2.4.0 ===> Applying FreeBSD patches for adios2-2.4.0 =========================================================================== =======================<phase: build-depends >============================ ===> adios2-2.4.0 depends on executable: bash - not found ===> Installing existing package /packages/All/bash-5.0.7.txz [112amd64-default-build-as-user-job-11] Installing bash-5.0.7... [112amd64-default-build-as-user-job-11] `-- Installing gettext-runtime-0.20.1... [112amd64-default-build-as-user-job-11] | `-- Installing indexinfo-0.3.1... [112amd64-default-build-as-user-job-11] | `-- Extracting indexinfo-0.3.1: .... done [112amd64-default-build-as-user-job-11] `-- Extracting gettext-runtime-0.20.1: .......... done [112amd64-default-build-as-user-job-11] Extracting bash-5.0.7: .......... done ===> adios2-2.4.0 depends on executable: bash - found ===> Returning to build of adios2-2.4.0 ===> adios2-2.4.0 depends on executable: bison - not found ===> Installing existing package /packages/All/bison-3.4.1,1.txz <snip> /wrkdirs/usr/ports/misc/adios2/work/ADIOS2-2.4.0/thirdparty/ffs/ffs/fm/fm_formats.c:3855:32: warning: implicit declaration of function 'ntohs' is invalid in C99 [-Wimplicit-function-declaration] id1.version, id1.salt, ntohs(id1.port), ^ /wrkdirs/usr/ports/misc/adios2/work/ADIOS2-2.4.0/thirdparty/ffs/ffs/fm/fm_formats.c:3856:9: warning: implicit declaration of function 'ntohl' is invalid in C99 [-Wimplicit-function-declaration] ntohl(id1.IP_addr), ntohs(id1.format_identifier)); ^ /wrkdirs/usr/ports/misc/adios2/work/ADIOS2-2.4.0/thirdparty/ffs/ffs/fm/fm_formats.c:3863:36: warning: implicit declaration of function 'ntohs' is invalid in C99 [-Wimplicit-function-declaration] id2->version, id2->unused, ntohs(id2->rep_len) << 2, ^ /wrkdirs/usr/ports/misc/adios2/work/ADIOS2-2.4.0/thirdparty/ffs/ffs/fm/fm_formats.c:3864:9: warning: implicit declaration of function 'ntohl' is invalid in C99 [-Wimplicit-function-declaration] ntohl(id2->hash1), ntohl(id2->hash2)); ^ /wrkdirs/usr/ports/misc/adios2/work/ADIOS2-2.4.0/thirdparty/ffs/ffs/fm/fm_formats.c:3934:9: warning: implicit declaration of function 'ntohs' is invalid in C99 [-Wimplicit-function-declaration] tmp = ntohs(tmp); ^ /wrkdirs/usr/ports/misc/adios2/work/ADIOS2-2.4.0/thirdparty/ffs/ffs/fm/fm_formats.c:4043:19: warning: implicit declaration of function 'ntohs' is invalid in C99 [-Wimplicit-function-declaration] *rep_length = ntohs(format->server_format_rep->format_rep_length); ^ 16 warnings generated. [51/284] /usr/bin/cc -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX -Dffs_EXPORTS -I/wrkdirs/usr/ports/misc/adios2/work/ADIOS2-2.4.0/thirdparty/ffs/ffs -I/wrkdirs/usr/ports/misc/adios2/work/ADIOS2-2.4.0/thirdparty/ffs/ffs/fm -I/wrkdirs/usr/ports/misc/adios2/work/ADIOS2-2.4.0/thirdparty/ffs/ffs/cod -I/wrkdirs/usr/ports/misc/adios2/work/ADIOS2-2.4.0/thirdparty/ffs/ffs/ffs -Ithirdparty/ffs/ffs -Ithirdparty/ffs/ffs/ffs -I/wrkdirs/usr/ports/misc/adios2/work/ADIOS2-2.4.0/thirdparty/dill/dill -Ithirdparty/dill/dill -I/wrkdirs/usr/ports/misc/adios2/work/ADIOS2-2.4.0/thirdparty/atl/atl -Ithirdparty/atl/atl -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=gnu99 -MD -MT thirdparty/ffs/ffs/CMakeFiles/ffs.dir/fm/fm_dump.c.o -MF thirdparty/ffs/ffs/CMakeFiles/ffs.dir/fm/fm_dump.c.o.d -o thirdparty/ffs/ffs/CMakeFiles/ffs.dir/fm/fm_dump.c.o -c /wrkdirs/usr/ports/misc/adios2/work/ADIOS2-2.4.0/thirdparty/ffs/ffs/fm/fm_dump.c [52/284] 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-fno-strict-aliasing -fstack-protector-strong examples/basics/globalArray/CMakeFiles/globalArray_write.dir/globalArray_write.cpp.o -o bin/globalArray_write -Wl,-rpath,/wrkdirs/usr/ports/misc/adios2/work/.build/lib:/usr/local/mpi/openmpi/lib lib/libadios2.so.2.4.0 -pthread -Wl,-rpath=-Wl,-rpath=/usr/local/lib/gcc9 -Wl,-rpath -Wl,/usr/local/mpi/openmpi/lib -Wl,--enable-new-dtags -pthread /usr/local/mpi/openmpi/lib/libmpi.so -Wl,-rpath-link,/wrkdirs/usr/ports/misc/adios2/work/.build/lib && : //usr/local/lib/libfabric.so.1: undefined reference to `epoll_ctl' //usr/local/lib/libfabric.so.1: undefined reference to `epoll_wait' //usr/local/lib/libfabric.so.1: undefined reference to `epoll_create' c++: error: linker command failed with exit code 1 (use -v to see invocation) ninja: build stopped: subcommand failed. *** Error code 1 Stop. make: stopped in /usr/ports/misc/adios2
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