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Date:      Tue, 18 Mar 2008 03:00:08 +0900
From:      KATO Tsuguru <tkato432@yahoo.com>
To:        FreeBSD-gnats-submit@FreeBSD.org
Subject:   ports/121794: Update port: biology/clustalw to 2.0.4
Message-ID:  <20080318030008.2a0ed919.tkato432@yahoo.com>
Resent-Message-ID: <200803171810.m2HIA0Xi091912@freefall.freebsd.org>

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>Number:         121794
>Category:       ports
>Synopsis:       Update port: biology/clustalw to 2.0.4
>Confidential:   no
>Severity:       non-critical
>Priority:       low
>Responsible:    freebsd-ports-bugs
>State:          open
>Quarter:        
>Keywords:       
>Date-Required:
>Class:          change-request
>Submitter-Id:   current-users
>Arrival-Date:   Mon Mar 17 18:10:00 UTC 2008
>Closed-Date:
>Last-Modified:
>Originator:     KATO Tsuguru
>Release:        FreeBSD 6.3-RELEASE-p1 i386
>Organization:
>Environment:
>Description:
- Update to version 2.0.4 

>How-To-Repeat:
>Fix:

diff -urN /usr/ports/biology/clustalw/Makefile biology/clustalw/Makefile
--- /usr/ports/biology/clustalw/Makefile	2008-02-27 15:19:00.000000000 +0900
+++ biology/clustalw/Makefile	2008-03-14 01:03:59.000000000 +0900
@@ -6,18 +6,19 @@
 #
 
 PORTNAME=	clustalw
-PORTVERSION=	2.0.3
-PORTREVISION=	1
+PORTVERSION=	2.0.4
 CATEGORIES=	biology
 MASTER_SITES=	ftp://ftp.ebi.ac.uk/pub/software/clustalw2/
 DISTNAME=	${PORTNAME}-${PORTVERSION}-src
 
 MAINTAINER=	ports@FreeBSD.org
-COMMENT=	CLUSTAL W Multiple Sequence Alignment Program
+COMMENT=	A multiple alignment program for DNA or proteins
 
-GNU_CONFIGURE=	yes
 WRKSRC=		${WRKDIR}/${PORTNAME}-${PORTVERSION}
 
+USE_GNOME=	gnometarget
+GNU_CONFIGURE=	yes
+
 PLIST_FILES=	bin/clustalw bin/clustalw2
 
 post-install:
diff -urN /usr/ports/biology/clustalw/distinfo biology/clustalw/distinfo
--- /usr/ports/biology/clustalw/distinfo	2008-02-26 13:36:32.000000000 +0900
+++ biology/clustalw/distinfo	2008-03-13 23:43:54.000000000 +0900
@@ -1,3 +1,3 @@
-MD5 (clustalw-2.0.3-src.tar.gz) = 77e7cf7fcea6084da22d2b19c52356c2
-SHA256 (clustalw-2.0.3-src.tar.gz) = 01a0dc2a3dc8d342367f5f7117749195a1c0d217c105d0a43e02565979cc459a
-SIZE (clustalw-2.0.3-src.tar.gz) = 287805
+MD5 (clustalw-2.0.4-src.tar.gz) = 0ee83a0e3cf8e1d2ccf406ae99621b31
+SHA256 (clustalw-2.0.4-src.tar.gz) = 2139c1edddb97b2fccf0356b3deb2d865a96db63b52aebec1a812dcd0429ad16
+SIZE (clustalw-2.0.4-src.tar.gz) = 288998
>Release-Note:
>Audit-Trail:
>Unformatted:



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