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Fri, 17 Jan 2025 18:19:05 GMT (envelope-from git) Date: Fri, 17 Jan 2025 18:19:05 GMT Message-Id: <202501171819.50HIJ5M5011669@gitrepo.freebsd.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org From: Thierry Thomas Subject: git: c7a29b1301cb - main - devel/R-cran-msm: upgrade to 1.8.2 List-Id: Commits to the main branch of the FreeBSD ports repository List-Archive: https://lists.freebsd.org/archives/dev-commits-ports-main List-Help: List-Post: List-Subscribe: List-Unsubscribe: X-BeenThere: dev-commits-ports-main@freebsd.org Sender: owner-dev-commits-ports-main@FreeBSD.org MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 8bit X-Git-Committer: thierry X-Git-Repository: ports X-Git-Refname: refs/heads/main X-Git-Reftype: branch X-Git-Commit: c7a29b1301cbd320bc8ceb954a379d4c6f08666c Auto-Submitted: auto-generated The branch main has been updated by thierry: URL: https://cgit.FreeBSD.org/ports/commit/?id=c7a29b1301cbd320bc8ceb954a379d4c6f08666c commit c7a29b1301cbd320bc8ceb954a379d4c6f08666c Author: Thierry Thomas AuthorDate: 2025-01-17 15:38:02 +0000 Commit: Thierry Thomas CommitDate: 2025-01-17 18:18:05 +0000 devel/R-cran-msm: upgrade to 1.8.2 Releases notes at https://cran.r-project.org/web/packages/msm/news/news.html --- devel/R-cran-msm/Makefile | 7 +++++-- devel/R-cran-msm/distinfo | 6 +++--- devel/R-cran-msm/pkg-plist | 12 ++++++++++++ 3 files changed, 20 insertions(+), 5 deletions(-) diff --git a/devel/R-cran-msm/Makefile b/devel/R-cran-msm/Makefile index c22ffac0b7a5..96db3b5c7cfb 100644 --- a/devel/R-cran-msm/Makefile +++ b/devel/R-cran-msm/Makefile @@ -1,5 +1,5 @@ PORTNAME= msm -PORTVERSION= 1.7.1 +PORTVERSION= 1.8.2 CATEGORIES= devel DISTNAME= ${PORTNAME}_${DISTVERSION} @@ -10,7 +10,10 @@ WWW= https://cran.r-project.org/package=msm LICENSE= GPLv2+ RUN_DEPENDS= R-cran-expm>0:math/R-cran-expm \ - R-cran-mvtnorm>0:math/R-cran-mvtnorm + R-cran-tibble>0:devel/R-cran-tibble \ + R-cran-mvtnorm>0:math/R-cran-mvtnorm \ + R-cran-generics>0:devel/R-cran-generics +TEST_DEPENDS= R-cran-testthat>0:devel/R-cran-testthat USES= cran:compiles diff --git a/devel/R-cran-msm/distinfo b/devel/R-cran-msm/distinfo index 9e466a5b8ea9..665a11880829 100644 --- a/devel/R-cran-msm/distinfo +++ b/devel/R-cran-msm/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1700851031 -SHA256 (msm_1.7.1.tar.gz) = d134782b966eed33742819595119ab1a61bec4416cc3fa7630a0f34c4e7f785b -SIZE (msm_1.7.1.tar.gz) = 939804 +TIMESTAMP = 1737060930 +SHA256 (msm_1.8.2.tar.gz) = 5b97353978b54d7315bc9690dbfdea0062cc2823d001dbcc035c3420df1ebe26 +SIZE (msm_1.8.2.tar.gz) = 995563 diff --git a/devel/R-cran-msm/pkg-plist b/devel/R-cran-msm/pkg-plist index e691d555c45a..bd1c7319442b 100644 --- a/devel/R-cran-msm/pkg-plist +++ b/devel/R-cran-msm/pkg-plist @@ -11,6 +11,7 @@ %%R_MOD_DIR%%/Meta/vignette.rds %%R_MOD_DIR%%/NAMESPACE %%R_MOD_DIR%%/NEWS +%%R_MOD_DIR%%/NEWS.md %%R_MOD_DIR%%/R/msm %%R_MOD_DIR%%/R/msm.rdb %%R_MOD_DIR%%/R/msm.rdx @@ -19,6 +20,7 @@ %%R_MOD_DIR%%/data/Rdata.rdx %%R_MOD_DIR%%/doc/index.html %%R_MOD_DIR%%/doc/msm-manual.R +%%R_MOD_DIR%%/doc/msm-manual.Rnw %%R_MOD_DIR%%/doc/msm-manual.pdf %%R_MOD_DIR%%/help/AnIndex %%R_MOD_DIR%%/help/aliases.rds @@ -31,11 +33,21 @@ %%R_MOD_DIR%%/tests/test_base.R %%R_MOD_DIR%%/tests/testthat/helper.r %%R_MOD_DIR%%/tests/testthat/test_analyticp.r +%%R_MOD_DIR%%/tests/testthat/test_boot.R %%R_MOD_DIR%%/tests/testthat/test_datasumm.r %%R_MOD_DIR%%/tests/testthat/test_deriv.r +%%R_MOD_DIR%%/tests/testthat/test_draic.r +%%R_MOD_DIR%%/tests/testthat/test_hmodel2list.R %%R_MOD_DIR%%/tests/testthat/test_models.r %%R_MOD_DIR%%/tests/testthat/test_models_hmm.r %%R_MOD_DIR%%/tests/testthat/test_models_hmmmulti.r %%R_MOD_DIR%%/tests/testthat/test_models_misc.r +%%R_MOD_DIR%%/tests/testthat/test_msm2Surv.R +%%R_MOD_DIR%%/tests/testthat/test_pearson.R +%%R_MOD_DIR%%/tests/testthat/test_phase.R +%%R_MOD_DIR%%/tests/testthat/test_ppass.R +%%R_MOD_DIR%%/tests/testthat/test_simul.R +%%R_MOD_DIR%%/tests/testthat/test_tidy.R %%R_MOD_DIR%%/tests/testthat/test_utils.r %%R_MOD_DIR%%/tests/testthat/test_viterbi.R +%%R_MOD_DIR%%/tests/testthat/test_weights.R