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Date: Sat, 28 Oct 2023 11:52:56 GMT
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To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org,
dev-commits-ports-main@FreeBSD.org
From: "Jason W. Bacon" <jwb@FreeBSD.org>
Subject: git: f20fa89b2c52 - main - biology/fasda: Update to 0.1.5
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X-Git-Committer: jwb
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X-Git-Commit: f20fa89b2c5271fcd7ff4c73e8944fb57267bd1e
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The branch main has been updated by jwb:
URL: https://cgit.FreeBSD.org/ports/commit/?id=f20fa89b2c5271fcd7ff4c73e8944fb57267bd1e
commit f20fa89b2c5271fcd7ff4c73e8944fb57267bd1e
Author: Jason W. Bacon <jwb@FreeBSD.org>
AuthorDate: 2023-10-28 11:32:20 +0000
Commit: Jason W. Bacon <jwb@FreeBSD.org>
CommitDate: 2023-10-28 11:32:20 +0000
biology/fasda: Update to 0.1.5
abundance:
Update stringtie command to also produce gene-level abundances
Output 0 for effective length for now to clearly indicate that it's invalid
normalize: Add --debug option
Updates for latest libxtend API
Test -> Yeast-test
Add Mouse-test suite with multiple mouse data options
Streamline test scripts
Changes: https://github.com/auerlab/fasda/releases
---
biology/fasda/Makefile | 2 +-
biology/fasda/distinfo | 6 +++---
2 files changed, 4 insertions(+), 4 deletions(-)
diff --git a/biology/fasda/Makefile b/biology/fasda/Makefile
index 3c9823658748..de98149dbb09 100644
--- a/biology/fasda/Makefile
+++ b/biology/fasda/Makefile
@@ -1,5 +1,5 @@
PORTNAME= fasda
-DISTVERSION= 0.1.4
+DISTVERSION= 0.1.5
CATEGORIES= biology
MAINTAINER= jwb@FreeBSD.org
diff --git a/biology/fasda/distinfo b/biology/fasda/distinfo
index 88743d780fa6..9ada38fe828f 100644
--- a/biology/fasda/distinfo
+++ b/biology/fasda/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1691756858
-SHA256 (auerlab-fasda-0.1.4_GH0.tar.gz) = 8e1b1536ff3c551c16b6ddca543378343e055a9b067ef5038e2b2f1fb2e874b9
-SIZE (auerlab-fasda-0.1.4_GH0.tar.gz) = 65254
+TIMESTAMP = 1698151465
+SHA256 (auerlab-fasda-0.1.5_GH0.tar.gz) = 38ff2231259c67e814937f1032808b99fca24763d80dc7a6ad40cc65a518c085
+SIZE (auerlab-fasda-0.1.5_GH0.tar.gz) = 77908