From owner-freebsd-ports-bugs@FreeBSD.ORG Tue Jun 2 10:05:39 2015 Return-Path: Delivered-To: freebsd-ports-bugs@FreeBSD.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) (using TLSv1.2 with cipher AECDH-AES256-SHA (256/256 bits)) (No client certificate requested) by hub.freebsd.org (Postfix) with ESMTPS id C7CF0CD for ; Tue, 2 Jun 2015 10:05:39 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: from kenobi.freebsd.org (kenobi.freebsd.org [IPv6:2001:1900:2254:206a::16:76]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mx1.freebsd.org (Postfix) with ESMTPS id B05B61464 for ; Tue, 2 Jun 2015 10:05:39 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: from bugs.freebsd.org ([127.0.1.118]) by kenobi.freebsd.org (8.14.9/8.14.9) with ESMTP id t52A5dF5025602 for ; Tue, 2 Jun 2015 10:05:39 GMT (envelope-from bugzilla-noreply@freebsd.org) From: bugzilla-noreply@freebsd.org To: freebsd-ports-bugs@FreeBSD.org Subject: [Bug 200590] science/hdf5: with FORTRAN option failed to build Date: Tue, 02 Jun 2015 10:05:39 +0000 X-Bugzilla-Reason: AssignedTo X-Bugzilla-Type: new X-Bugzilla-Watch-Reason: None X-Bugzilla-Product: Ports & Packages X-Bugzilla-Component: Individual Port(s) X-Bugzilla-Version: Latest X-Bugzilla-Keywords: X-Bugzilla-Severity: Affects Some People X-Bugzilla-Who: fmysh@iijmio-mail.jp X-Bugzilla-Status: New X-Bugzilla-Priority: --- X-Bugzilla-Assigned-To: sunpoet@FreeBSD.org X-Bugzilla-Target-Milestone: --- X-Bugzilla-Flags: maintainer-feedback? X-Bugzilla-Changed-Fields: bug_id short_desc product version rep_platform op_sys bug_status bug_severity priority component assigned_to reporter flagtypes.name attachments.created Message-ID: Content-Type: text/plain; charset="UTF-8" Content-Transfer-Encoding: 7bit X-Bugzilla-URL: https://bugs.freebsd.org/bugzilla/ Auto-Submitted: auto-generated MIME-Version: 1.0 X-BeenThere: freebsd-ports-bugs@freebsd.org X-Mailman-Version: 2.1.20 Precedence: list List-Id: Ports bug reports List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 02 Jun 2015 10:05:40 -0000 https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=200590 Bug ID: 200590 Summary: science/hdf5: with FORTRAN option failed to build Product: Ports & Packages Version: Latest Hardware: Any OS: Any Status: New Severity: Affects Some People Priority: --- Component: Individual Port(s) Assignee: sunpoet@FreeBSD.org Reporter: fmysh@iijmio-mail.jp Flags: maintainer-feedback?(sunpoet@FreeBSD.org) Assignee: sunpoet@FreeBSD.org Created attachment 157369 --> https://bugs.freebsd.org/bugzilla/attachment.cgi?id=157369&action=edit patch for Makefile science/hdf5 with FORTRAN option depends on lang/gcc48 for gfortran. Build process fails trying to link with not /usr/local/lib/gcc48/libgcc_s.so.1 but /usr/lib/libgcc_s.so.1. # make (snip) Making all in fortran Making all in src FC H5test_kind_STORAGE_SIZE.o FCLD H5test_kind /usr/local/lib/gcc48/libgfortran.so: undefined reference to `__getf2@GCC_4.6.0' /usr/local/lib/gcc48/libgfortran.so: undefined reference to `__floatunditf@GCC_4.6.0' /usr/local/lib/gcc48/libgfortran.so: undefined reference to `__subtf3@GCC_4.6.0' /usr/local/lib/gcc48/libgfortran.so: undefined reference to `__multf3@GCC_4.6.0' /usr/local/lib/gcc48/libgfortran.so: undefined reference to `__unordtf2@GCC_4.6.0' /usr/local/lib/gcc48/libgfortran.so: undefined reference to `__lttf2@GCC_4.6.0' /usr/local/lib/gcc48/libgfortran.so: undefined reference to `__addtf3@GCC_4.6.0' /usr/local/lib/gcc48/libgfortran.so: undefined reference to `__gttf2@GCC_4.6.0' /usr/local/lib/gcc48/libgfortran.so: undefined reference to `__divtf3@GCC_4.6.0' /usr/local/lib/gcc48/libgfortran.so: undefined reference to `__letf2@GCC_4.6.0' /usr/local/lib/gcc48/libgfortran.so: undefined reference to `__netf2@GCC_4.6.0' /usr/local/lib/gcc48/libgfortran.so: undefined reference to `__floatditf@GCC_4.6.0' /usr/local/lib/gcc48/libgfortran.so: undefined reference to `__trunctfdf2@GCC_4.6.0' /usr/local/lib/gcc48/libgfortran.so: undefined reference to `__eqtf2@GCC_4.6.0' /usr/local/lib/gcc48/libgfortran.so: undefined reference to `__floatsitf@GCC_4.6.0' collect2: error: ld returned 1 exit status *** [H5test_kind] Error code 1 Stop in /usr//ports/science/hdf5/work/hdf5-1.8.15/fortran/src. *** [all-recursive] Error code 1 Stop in /usr/ports/science/hdf5/work/hdf5-1.8.15/fortran. *** [all-recursive] Error code 1 Stop in /usr/ports/science/hdf5/work/hdf5-1.8.15. *** [do-build] Error code 1 Stop in /usr/ports/science/hdf5. *** [stage] Error code 1 Stop in /usr/ports/science/hdf5. Generated Makefiles by configure have -L/usr/lib explicitly before -L/usr/local/lib/gcc48. They come from CONFIGURE_ARGS=--with-zlib=/usr. As zlib is enabled by default, This is unnecessary. Removing the argument cleared the problem. -- You are receiving this mail because: You are the assignee for the bug.