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charset=utf-8 Content-Transfer-Encoding: 8bit X-Git-Committer: jrm X-Git-Repository: ports X-Git-Refname: refs/heads/main X-Git-Reftype: branch X-Git-Commit: 064a345ed3bbe6d838f5284d3d0c759c3b7a4a5f Auto-Submitted: auto-generated Date: Sat, 28 Feb 2026 18:03:42 +0000 Message-Id: <69a32dfe.43904.1b1d6e7b@gitrepo.freebsd.org> The branch main has been updated by jrm: URL: https://cgit.FreeBSD.org/ports/commit/?id=064a345ed3bbe6d838f5284d3d0c759c3b7a4a5f commit 064a345ed3bbe6d838f5284d3d0c759c3b7a4a5f Author: Joseph Mingrone AuthorDate: 2026-02-28 18:00:53 +0000 Commit: Joseph Mingrone CommitDate: 2026-02-28 18:03:38 +0000 biology/hyphy: Update to 2.5.96 Release notes: https://github.com/veg/hyphy/releases/tag/2.5.96 Sponsored by: The FreeBSD Foundation --- biology/hyphy/Makefile | 2 +- biology/hyphy/distinfo | 6 +++--- biology/hyphy/pkg-plist | 1 + 3 files changed, 5 insertions(+), 4 deletions(-) diff --git a/biology/hyphy/Makefile b/biology/hyphy/Makefile index d836d1bdfbc4..eb0882175794 100644 --- a/biology/hyphy/Makefile +++ b/biology/hyphy/Makefile @@ -1,5 +1,5 @@ PORTNAME= hyphy -DISTVERSION= 2.5.94 +DISTVERSION= 2.5.96 CATEGORIES= biology MAINTAINER= jrm@FreeBSD.org diff --git a/biology/hyphy/distinfo b/biology/hyphy/distinfo index 2061e64b478e..7f439cfaed7c 100644 --- a/biology/hyphy/distinfo +++ b/biology/hyphy/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1771513436 -SHA256 (veg-hyphy-2.5.94_GH0.tar.gz) = 694401498f8944afa40ed00be3d971099ab6017d793a0ad12d31893ee08c87fe -SIZE (veg-hyphy-2.5.94_GH0.tar.gz) = 4376464 +TIMESTAMP = 1772299484 +SHA256 (veg-hyphy-2.5.96_GH0.tar.gz) = f237b2157a687011fcaad9d6a53d7fdac1fc6bb2fe233fecc1423f1fe7a4b2b1 +SIZE (veg-hyphy-2.5.96_GH0.tar.gz) = 4383083 diff --git a/biology/hyphy/pkg-plist b/biology/hyphy/pkg-plist index e7588b6183f1..9ef8a9dd12a5 100644 --- a/biology/hyphy/pkg-plist +++ b/biology/hyphy/pkg-plist @@ -180,6 +180,7 @@ bin/hyphy %%DATADIR%%/TemplateBatchFiles/Samplers/srs-ErrorEst.ibf %%DATADIR%%/TemplateBatchFiles/Samplers/srs.ibf %%DATADIR%%/TemplateBatchFiles/SandNSAmbigs.bf +%%DATADIR%%/TemplateBatchFiles/SelectionAnalyses/B-STILL.bf %%DATADIR%%/TemplateBatchFiles/SelectionAnalyses/BUSTED-PH.bf %%DATADIR%%/TemplateBatchFiles/SelectionAnalyses/BUSTED.bf %%DATADIR%%/TemplateBatchFiles/SelectionAnalyses/BranchSiteREL.bf