Date: Sun, 5 May 2024 14:47:07 GMT From: "Jason W. Bacon" <jwb@FreeBSD.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org Subject: git: 5d736fc85e42 - main - biology/kallisto: Use EXTRACT_AFTER_ARGS to omit unused htslib dir Message-ID: <202405051447.445El7wK029040@gitrepo.freebsd.org>
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The branch main has been updated by jwb: URL: https://cgit.FreeBSD.org/ports/commit/?id=5d736fc85e42aac2649de640037dc54382176691 commit 5d736fc85e42aac2649de640037dc54382176691 Author: Jason W. Bacon <jwb@FreeBSD.org> AuthorDate: 2024-05-05 14:44:55 +0000 Commit: Jason W. Bacon <jwb@FreeBSD.org> CommitDate: 2024-05-05 14:47:05 +0000 biology/kallisto: Use EXTRACT_AFTER_ARGS to omit unused htslib dir Reduces I/O during builds PR: 278739 Reported by: diizzy --- biology/kallisto/Makefile | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/biology/kallisto/Makefile b/biology/kallisto/Makefile index 8774208d9097..158ff03a9137 100644 --- a/biology/kallisto/Makefile +++ b/biology/kallisto/Makefile @@ -1,6 +1,7 @@ PORTNAME= kallisto DISTVERSIONPREFIX= v DISTVERSION= 0.50.1 +PORTREVISION= 1 PORTEPOCH= 1 CATEGORIES= biology @@ -22,6 +23,8 @@ USES= cmake:noninja compiler:c++11-lang gmake localbase:ldflags USE_GITHUB= yes GH_ACCOUNT= pachterlab +EXTRACT_AFTER_ARGS= --exclude ${GH_PROJECT_DEFAULT}-${GH_TAGNAME_EXTRACT}/ext/htslib --no-same-owner --no-same-permissions + SUB_FILES= kallisto-test PORTEXAMPLES= * @@ -39,9 +42,6 @@ LDFLAGS+= -lhts -lz OPTIONS_DEFINE= EXAMPLES -post-extract: - ${RM} -rf ${WRKSRC}/ext/htslib - post-install-EXAMPLES-on: ${INSTALL_SCRIPT} ${WRKDIR}/kallisto-test ${STAGEDIR}${PREFIX}/bin cd ${WRKSRC}/test && ${COPYTREE_SHARE} . ${STAGEDIR}${EXAMPLESDIR}
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