Date: Sun, 22 Nov 2020 18:56:19 GMT From: pkg-fallout@FreeBSD.org To: pkg-fallout@FreeBSD.org Subject: [package - head-armv6-default][science/avogadrolibs] Failed for avogadrolibs-1.93.0 in build Message-ID: <202011221856.0AMIuJMR070801@beefy8.nyi.freebsd.org>
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You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: yuri@FreeBSD.org Last committer: yuri@FreeBSD.org Ident: $FreeBSD: head/science/avogadrolibs/Makefile 533149 2020-04-27 16:09:56Z yuri $ Log URL: http://beefy8.nyi.freebsd.org/data/head-armv6-default/p555803_s367916/logs/avogadrolibs-1.93.0.log Build URL: http://beefy8.nyi.freebsd.org/build.html?mastername=head-armv6-default&build=p555803_s367916 Log: =>> Building science/avogadrolibs build started at Sun Nov 22 18:26:53 UTC 2020 port directory: /usr/ports/science/avogadrolibs package name: avogadrolibs-1.93.0 building for: FreeBSD head-armv6-default-job-16 13.0-CURRENT FreeBSD 13.0-CURRENT 1300130 arm maintained by: yuri@FreeBSD.org Makefile ident: $FreeBSD: head/science/avogadrolibs/Makefile 533149 2020-04-27 16:09:56Z yuri $ Poudriere version: 3.2.8-8-gaf08dbda Host OSVERSION: 1300121 Jail OSVERSION: 1300130 Job Id: 16 !!! Jail is newer than host. (Jail: 1300130, Host: 1300121) !!! !!! This is not supported. !!! !!! Host kernel must be same or newer than jail. !!! !!! Expect build failures. !!! ---Begin Environment--- SHELL=/bin/csh UNAME_p=armv6 UNAME_m=arm ABI_FILE=/usr/lib/crt1.o OSVERSION=1300130 UNAME_v=FreeBSD 13.0-CURRENT 1300130 UNAME_r=13.0-CURRENT BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local QEMU_EMULATING=1 USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-8-gaf08dbda MASTERMNT=/usr/local/poudriere/data/.m/head-armv6-default/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= PWD=/usr/local/poudriere/data/.m/head-armv6-default/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=head-armv6-default SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/head-armv6-default/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ===> The following configuration options are available for avogadrolibs-1.93.0: HDF5=off: HDF-5 data format support LIBARCHIVE=on: Enable optional Libarchive features LIBMSYM=on: Enable optional features using libmsym MOLEQUEUE=on: Enable the MoleQueue dependent functionality OPENGL=on: 2D/3D rendering support via OpenGL QT5=on: Qt 5 toolkit support SPGLIB=on: Enable optional features using spglib VTK=off: Enable libraries that use VTK ===> Use 'make config' to modify these settings ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- QT_SELECT=qt5 QMAKEMODULES="/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/mkspecs/modules:/usr/local/lib/qt5/mkspecs/modules" XDG_DATA_HOME=/wrkdirs/usr/ports/science/avogadrolibs/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/avogadrolibs/work 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QT_IMPORTDIR="lib/qt5/imports" QT_QMLDIR="lib/qt5/qml" QT_DATADIR="share/qt5" QT_DOCDIR="share/doc/qt5" QT_L10NDIR="share/qt5/translations" QT_EXAMPLEDIR="share/examples/qt5" QT_TESTDIR="share/qt5/tests" QT_MKSPECDIR="lib/qt5/mkspecs" QT_QTCHOOSERDIR="etc/xdg/qtchooser" OSREL=13.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/avogadrolibs" EXAMPLESDIR="share/examples/avogadrolibs" DATADIR="share/avogadrolibs" WWWDIR="www/avogadrolibs" ETCDIR="etc/avogadrolibs" --End PLIST_SUB-- --SUB_LIST-- HDF5="@comment " NO_HDF5="" LIBARCHIVE="" NO_LIBARCHIVE="@comment " LIBMSYM="" NO_LIBMSYM="@comment " MOLEQUEUE="" NO_MOLEQUEUE="@comment " OPENGL="" NO_OPENGL="@comment " QT5="" NO_QT5="@comment " SPGLIB="" NO_SPGLIB="@comment " VTK="@comment " NO_VTK="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/avogadrolibs DOCSDIR=/usr/local/share/doc/avogadrolibs EXAMPLESDIR=/usr/local/share/examples/avogadrolibs WWWDIR=/usr/local/www/avogadrolibs ETCDIR=/usr/local/etc/avogadrolibs --End SUB_LIST-- ---Begin make.conf--- .sinclude "/etc/make.nxb.conf" USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes MACHINE=arm MACHINE_ARCH=armv6 ARCH=${MACHINE_ARCH} #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. 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It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 #### /usr/ports/Mk/Scripts/ports_env.sh #### _CCVERSION_9d218390=FreeBSD clang version 11.0.0 (git@github.com:llvm/llvm-project.git llvmorg-11.0.0-0-g176249bd673) Target: armv6-unknown-freebsd13.0-gnueabihf Thread model: posix InstalledDir: /nxb-bin/usr/bin _ALTCCVERSION_9d218390=none _CXXINTERNAL_9c45a5b1=FreeBSD clang version 11.0.0 (git@github.com:llvm/llvm-project.git llvmorg-11.0.0-0-g176249bd673) Target: armv6-unknown-freebsd13.0-gnueabihf Thread model: posix InstalledDir: /nxb-bin/usr/bin "/nxb-bin/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_9d218390_58173849=yes CC_OUTPUT_9d218390_9bdba57c=yes CC_OUTPUT_9d218390_6a4fe7f5=yes CC_OUTPUT_9d218390_6bcac02b=yes CC_OUTPUT_9d218390_67d20829=yes CC_OUTPUT_9d218390_bfa62e83=yes CC_OUTPUT_9d218390_f0b4d593=yes CC_OUTPUT_9d218390_308abb44=yes CC_OUTPUT_9d218390_f00456e5=yes CC_OUTPUT_9d218390_65ad290d=yes CC_OUTPUT_9d218390_f2776b26=yes CC_OUTPUT_9d218390_b2657cc3=yes CC_OUTPUT_9d218390_380987f7=yes CC_OUTPUT_9d218390_160933ec=yes CC_OUTPUT_9d218390_fb62803b=yes _OBJC_CCVERSION_9d218390=FreeBSD clang version 11.0.0 (git@github.com:llvm/llvm-project.git llvmorg-11.0.0-0-g176249bd673) Target: armv6-unknown-freebsd13.0-gnueabihf Thread model: posix InstalledDir: /nxb-bin/usr/bin _OBJC_ALTCCVERSION_9d218390=none ARCH=armv6 OPSYS=FreeBSD _OSRELEASE=13.0-CURRENT OSREL=13.0 OSVERSION=1300130 PYTHONBASE=/usr/local CONFIGURE_MAX_CMD_LEN=524288 HAVE_PORTS_ENV=1 #### Misc Poudriere #### GID=0 UID=0 DISABLE_MAKE_JOBS=poudriere ---End make.conf--- ---Begin make.nxb.conf--- CC=/nxb-bin/usr/bin/cc CPP=/nxb-bin/usr/bin/cpp CXX=/nxb-bin/usr/bin/c++ NM=/nxb-bin/usr/bin/nm LD=/nxb-bin/usr/bin/ld OBJCOPY=/nxb-bin/usr/bin/objcopy SIZE=/nxb-bin/usr/bin/size STRIPBIN=/nxb-bin/usr/bin/strip SED=/nxb-bin/usr/bin/sed RANLIB=/nxb-bin/usr/bin/ranlib YACC=/nxb-bin/usr/bin/yacc MAKE=/nxb-bin/usr/bin/make STRINGS=/nxb-bin/usr/bin/strings AWK=/nxb-bin/usr/bin/awk FLEX=/nxb-bin/usr/bin/flex ---End make.nxb.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===> License GPLv2 accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===> avogadrolibs-1.93.0 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.15.10.txz [head-armv6-default-job-16] Installing pkg-1.15.10... [head-armv6-default-job-16] Extracting pkg-1.15.10: .......... done ===> avogadrolibs-1.93.0 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of avogadrolibs-1.93.0 <snip> note: (skipping 1 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) /usr/local/include/qt5/QtCore/qglobal.h:372:45: note: expanded from macro 'QT_DEPRECATED_VERSION_X_5_15' # define QT_DEPRECATED_VERSION_X_5_15(text) QT_DEPRECATED_X(text) ^ /usr/local/include/qt5/QtCore/qglobal.h:294:33: note: expanded from macro 'QT_DEPRECATED_X' # define QT_DEPRECATED_X(text) Q_DECL_DEPRECATED_X(text) ^ /usr/local/include/qt5/QtCore/qcompilerdetection.h:675:55: note: expanded from macro 'Q_DECL_DEPRECATED_X' # define Q_DECL_DEPRECATED_X(text) __attribute__ ((__deprecated__(text))) ^ /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/molequeue/inputgenerator.cpp:539:55: warning: 'endl' is deprecated: Use Qt::endl [-Wdeprecated-declarations] qDebug() << "Error while parsing pattern:" << endl ^ /usr/local/include/qt5/QtCore/qtextstream.h:293:15: note: 'endl' has been explicitly marked deprecated here Q_CORE_EXPORT QT_DEPRECATED_VERSION_X(5, 15, "Use Qt::endl") QTextStream &endl(QTextStream &s); ^ /usr/local/include/qt5/QtCore/qglobal.h:380:53: note: expanded from macro 'QT_DEPRECATED_VERSION_X' #define QT_DEPRECATED_VERSION_X(major, minor, text) QT_DEPRECATED_VERSION_X_##major(minor, text) ^ <scratch space>:191:1: note: expanded from here QT_DEPRECATED_VERSION_X_5 ^ /usr/local/include/qt5/QtCore/qglobal.h:379:53: note: expanded from macro 'QT_DEPRECATED_VERSION_X_5' #define QT_DEPRECATED_VERSION_X_5(minor, text) QT_DEPRECATED_VERSION_X_5_##minor(text) ^ note: (skipping 1 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) /usr/local/include/qt5/QtCore/qglobal.h:372:45: note: expanded from macro 'QT_DEPRECATED_VERSION_X_5_15' # define QT_DEPRECATED_VERSION_X_5_15(text) QT_DEPRECATED_X(text) ^ /usr/local/include/qt5/QtCore/qglobal.h:294:33: note: expanded from macro 'QT_DEPRECATED_X' # define QT_DEPRECATED_X(text) Q_DECL_DEPRECATED_X(text) ^ /usr/local/include/qt5/QtCore/qcompilerdetection.h:675:55: note: expanded from macro 'Q_DECL_DEPRECATED_X' # define Q_DECL_DEPRECATED_X(text) __attribute__ ((__deprecated__(text))) ^ /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/molequeue/inputgenerator.cpp:549:52: warning: 'endl' is deprecated: Use Qt::endl [-Wdeprecated-declarations] qDebug() << "Error while parsing format:" << endl ^ /usr/local/include/qt5/QtCore/qtextstream.h:293:15: note: 'endl' has been explicitly marked deprecated here Q_CORE_EXPORT QT_DEPRECATED_VERSION_X(5, 15, "Use Qt::endl") QTextStream &endl(QTextStream &s); ^ /usr/local/include/qt5/QtCore/qglobal.h:380:53: note: expanded from macro 'QT_DEPRECATED_VERSION_X' #define QT_DEPRECATED_VERSION_X(major, minor, text) QT_DEPRECATED_VERSION_X_##major(minor, text) ^ <scratch space>:191:1: note: expanded from here QT_DEPRECATED_VERSION_X_5 ^ /usr/local/include/qt5/QtCore/qglobal.h:379:53: note: expanded from macro 'QT_DEPRECATED_VERSION_X_5' #define QT_DEPRECATED_VERSION_X_5(minor, text) QT_DEPRECATED_VERSION_X_5_##minor(text) ^ note: (skipping 1 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) /usr/local/include/qt5/QtCore/qglobal.h:372:45: note: expanded from macro 'QT_DEPRECATED_VERSION_X_5_15' # define QT_DEPRECATED_VERSION_X_5_15(text) QT_DEPRECATED_X(text) ^ /usr/local/include/qt5/QtCore/qglobal.h:294:33: note: expanded from macro 'QT_DEPRECATED_X' # define QT_DEPRECATED_X(text) Q_DECL_DEPRECATED_X(text) ^ /usr/local/include/qt5/QtCore/qcompilerdetection.h:675:55: note: expanded from macro 'Q_DECL_DEPRECATED_X' # define Q_DECL_DEPRECATED_X(text) __attribute__ ((__deprecated__(text))) ^ 7 warnings generated. [282/475] /nxb-bin/usr/bin/c++ -DAvogadroMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Iavogadro/molequeue/AvogadroMoleQueue_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -isystem /usr/local/include/qt5/QtNetwork -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -std=c++11 -MD -MT avogadro/molequeue/CMakeF 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/usr/local/include/qt5/QtNetwork -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -std=c++11 -MD -MT avogadro/molequeue/CMakeF iles/AvogadroMoleQueue.dir/batchjob.cpp.o -MF avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/batchjob.cpp.o.d -o avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/batchjob.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/molequeue/batchjob.cpp [284/475] /nxb-bin/usr/bin/c++ -DAvogadroMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Iavogadro/molequeue/AvogadroMoleQueue_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -isystem /usr/local/include/qt5/QtNetwork -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -std=c++11 -MD -MT avogadro/molequeue/CMakeF iles/AvogadroMoleQueue.dir/inputgeneratordialog.cpp.o -MF avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/inputgeneratordialog.cpp.o.d -o avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/inputgeneratordialog.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/molequeue/inputgeneratordialog.cpp [285/475] /nxb-bin/usr/bin/c++ -DAvogadroMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Iavogadro/molequeue/AvogadroMoleQueue_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -isystem /usr/local/include/qt5/QtNetwork -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -std=c++11 -MD -MT avogadro/molequeue/CMakeF iles/AvogadroMoleQueue.dir/inputgeneratorwidget.cpp.o -MF avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/inputgeneratorwidget.cpp.o.d -o avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/inputgeneratorwidget.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/molequeue/inputgeneratorwidget.cpp /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/molequeue/inputgeneratorwidget.cpp:414:27: warning: 'width' is deprecated: Use QFontMetrics::horizontalAdvance [-Wdeprecated-declarations] int charWidth = metrics.width("i7OPlmWn9/") / 10; ^ /usr/local/include/qt5/QtGui/qfontmetrics.h:105:5: note: 'width' has been explicitly marked deprecated here QT_DEPRECATED_X("Use QFontMetrics::horizontalAdvance") ^ /usr/local/include/qt5/QtCore/qglobal.h:294:33: note: expanded from macro 'QT_DEPRECATED_X' # define QT_DEPRECATED_X(text) Q_DECL_DEPRECATED_X(text) ^ /usr/local/include/qt5/QtCore/qcompilerdetection.h:675:55: note: expanded from macro 'Q_DECL_DEPRECATED_X' # define Q_DECL_DEPRECATED_X(text) __attribute__ ((__deprecated__(text))) ^ 1 warning generated. [286/475] /nxb-bin/usr/bin/c++ -DAvogadroMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Iavogadro/molequeue/AvogadroMoleQueue_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -isystem /usr/local/include/qt5/QtNetwork -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -std=c++11 -MD -MT avogadro/molequeue/CMakeF iles/AvogadroMoleQueue.dir/molequeuedialog.cpp.o -MF avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/molequeuedialog.cpp.o.d -o avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/molequeuedialog.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/molequeue/molequeuedialog.cpp [287/475] /nxb-bin/usr/bin/c++ -DAvogadroMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Iavogadro/molequeue/AvogadroMoleQueue_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -isystem /usr/local/include/qt5/QtNetwork -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -std=c++11 -MD -MT avogadro/molequeue/CMakeF iles/AvogadroMoleQueue.dir/molequeuemanager.cpp.o -MF avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/molequeuemanager.cpp.o.d -o avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/molequeuemanager.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/molequeue/molequeuemanager.cpp [288/475] /nxb-bin/usr/bin/c++ -DAvogadroMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Iavogadro/molequeue/AvogadroMoleQueue_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -isystem /usr/local/include/qt5/QtNetwork -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -std=c++11 -MD -MT avogadro/molequeue/CMakeF iles/AvogadroMoleQueue.dir/molequeuequeuelistmodel.cpp.o -MF avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/molequeuequeuelistmodel.cpp.o.d -o avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/molequeuequeuelistmodel.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/molequeue/molequeuequeuelistmodel.cpp [289/475] /nxb-bin/usr/bin/c++ -DAvogadroMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Iavogadro/molequeue/AvogadroMoleQueue_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -isystem /usr/local/include/qt5/QtNetwork -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -std=c++11 -MD -MT avogadro/molequeue/CMakeF iles/AvogadroMoleQueue.dir/molequeuewidget.cpp.o -MF avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/molequeuewidget.cpp.o.d -o avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/molequeuewidget.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/molequeue/molequeuewidget.cpp [290/475] : && /nxb-bin/usr/bin/c++ -fPIC -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fstack-protector-strong -shared -Wl,-soname,libAvogadroMoleQueue.so.1 -o lib/libAvogadroMoleQueue.so.1.93.0 avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/AvogadroMoleQueue_autogen/mocs_compilation.cpp.o avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/batchjob.cpp.o avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/inputgenerator.cpp.o avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/inputgeneratordialog.cpp.o avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/inputgeneratorwidget.cpp.o avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/molequeuedialog.cpp.o avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/molequeuemanager.cpp.o avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/molequeuequeuelistmo del.cpp.o avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/molequeuewidget.cpp.o -Wl,-rpath,/wrkdirs/usr/ports/science/avogadrolibs/work/.build/lib:/usr/local/lib:/usr/local/lib/qt5: lib/libAvogadroQtGui.so.1.93.0 /usr/local/lib/libMoleQueueClient.so /usr/local/lib/qt5/libQt5Widgets.so.5.15.0 /usr/local/lib/qt5/libQt5Network.so.5.15.0 lib/libAvogadroIO.so.1.93.0 lib/libAvogadroCore.so.1.93.0 /usr/local/lib/qt5/libQt5Widgets.so.5.15.0 /usr/local/lib/qt5/libQt5Gui.so.5.15.0 /usr/local/lib/qt5/libQt5Core.so.5.15.0 /usr/local/lib/qt5/libQt5Gui.so.5.15.0 /usr/local/lib/qt5/libQt5Core.so.5.15.0 -Wl,-rpath-link,/usr/local/lib && : [291/475] /usr/local/bin/cmake -E cmake_symlink_library lib/libAvogadroMoleQueue.so.1.93.0 lib/libAvogadroMoleQueue.so.1 lib/libAvogadroMoleQueue.so && : [292/475] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/quantuminput && /usr/local/bin/cmake -E cmake_autogen /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen.dir/AutogenInfo.json Release && /usr/local/bin/cmake -E touch /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/quantuminput/QuantumInput_autogen/timestamp [293/475] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/quantuminput/QuantumInput_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/quantuminput -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -isystem /usr/local/include/qt5/QtNetwork -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 - MD -MT avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/QuantumInput_autogen/mocs_compilation.cpp.o -MF avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/QuantumInput_autogen/mocs_compilation.cpp.o.d -o avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/QuantumInput_autogen/mocs_compilation.cpp.o -c avogadro/qtplugins/quantuminput/QuantumInput_autogen/mocs_compilation.cpp [294/475] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/quantuminput/QuantumInput_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/quantuminput -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -isystem /usr/local/include/qt5/QtNetwork -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 - MD -MT avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/quantuminput.cpp.o -MF avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/quantuminput.cpp.o.d -o avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/quantuminput.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/quantuminput/quantuminput.cpp /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/quantuminput/quantuminput.cpp:219:64: warning: 'uniqueKeys' is deprecated: Use QMultiMap for maps storing multiple values with the same key. [-Wdeprecated-declarations] foreach (const QString& programName, m_inputGeneratorScripts.uniqueKeys()) { ^ /usr/local/include/qt5/QtCore/qglobal.h:1124:21: note: expanded from macro 'foreach' # define foreach Q_FOREACH ^ /usr/local/include/qt5/QtCore/qmap.h:387:5: note: 'uniqueKeys' has been explicitly marked deprecated here QT_DEPRECATED_VERSION_X_5_15("Use QMultiMap for maps storing multiple values with the same key.") QList<Key> uniqueKeys() const; ^ /usr/local/include/qt5/QtCore/qglobal.h:372:45: note: expanded from macro 'QT_DEPRECATED_VERSION_X_5_15' # define QT_DEPRECATED_VERSION_X_5_15(text) QT_DEPRECATED_X(text) ^ /usr/local/include/qt5/QtCore/qglobal.h:294:33: note: expanded from macro 'QT_DEPRECATED_X' # define QT_DEPRECATED_X(text) Q_DECL_DEPRECATED_X(text) ^ /usr/local/include/qt5/QtCore/qcompilerdetection.h:675:55: note: expanded from macro 'Q_DECL_DEPRECATED_X' # define Q_DECL_DEPRECATED_X(text) __attribute__ ((__deprecated__(text))) ^ /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/quantuminput/quantuminput.cpp:220:51: warning: 'values' is deprecated: Use QMultiMap for maps storing multiple values with the same key. [-Wdeprecated-declarations] QStringList scripts = m_inputGeneratorScripts.values(programName); ^ /usr/local/include/qt5/QtCore/qmap.h:388:5: note: 'values' has been explicitly marked deprecated here QT_DEPRECATED_VERSION_X_5_15("Use QMultiMap for maps storing multiple values with the same key.") QList<T> values(const Key &key) const; ^ /usr/local/include/qt5/QtCore/qglobal.h:372:45: note: expanded from macro 'QT_DEPRECATED_VERSION_X_5_15' # define QT_DEPRECATED_VERSION_X_5_15(text) QT_DEPRECATED_X(text) ^ /usr/local/include/qt5/QtCore/qglobal.h:294:33: note: expanded from macro 'QT_DEPRECATED_X' # define QT_DEPRECATED_X(text) Q_DECL_DEPRECATED_X(text) ^ /usr/local/include/qt5/QtCore/qcompilerdetection.h:675:55: note: expanded from macro 'Q_DECL_DEPRECATED_X' # define Q_DECL_DEPRECATED_X(text) __attribute__ ((__deprecated__(text))) ^ 2 warnings generated. [295/475] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/quantuminput/QuantumInput_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/quantuminput -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -isystem /usr/local/include/qt5/QtNetwork -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 - MD -MT avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/QuantumInputPlugin.cpp.o -MF avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/QuantumInputPlugin.cpp.o.d -o avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/QuantumInputPlugin.cpp.o -c avogadro/qtplugins/quantuminput/QuantumInputPlugin.cpp [296/475] : && /usr/local/bin/cmake -E rm -f lib/avogadro2/staticplugins/QuantumInput.a && /nxb-bin/usr/bin/ar qc lib/avogadro2/staticplugins/QuantumInput.a avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/QuantumInput_autogen/mocs_compilation.cpp.o avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/quantuminput.cpp.o avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/QuantumInputPlugin.cpp.o && /nxb-bin/usr/bin/ranlib lib/avogadro2/staticplugins/QuantumInput.a && : [297/475] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/apbs && /usr/local/bin/cmake -E cmake_autogen /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen.dir/AutogenInfo.json Release && /usr/local/bin/cmake -E touch /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/apbs/apbs_autogen/timestamp [298/475] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/apbs && /usr/local/lib/qt5/bin/uic -o /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/apbs/ui_apbsdialog.h /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/apbs/apbsdialog.ui [299/475] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/apbs && /usr/local/lib/qt5/bin/uic -o /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/apbs/ui_apbsoutputdialog.h /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/apbs/apbsoutputdialog.ui [300/475] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/apbs/apbs_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/apbs -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -isystem /usr/local/include/qt5/QtNetwork -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugin s/apbs/CMakeFiles/apbs.dir/apbsPlugin.cpp.o -MF avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/apbsPlugin.cpp.o.d -o avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/apbsPlugin.cpp.o -c avogadro/qtplugins/apbs/apbsPlugin.cpp [301/475] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/gamessinput && /usr/local/bin/cmake -E cmake_autogen /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen.dir/AutogenInfo.json Release && /usr/local/bin/cmake -E touch /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/gamessinput/GamessInput_autogen/timestamp [302/475] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/gamessinput && /usr/local/lib/qt5/bin/uic -o /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/gamessinput/ui_gamessinputdialog.h /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/gamessinput/gamessinputdialog.ui [303/475] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/gamessinput/GamessInput_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/gamessinput -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -isystem /usr/local/include/qt5/QtNetwork -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/GamessInput_autogen/mocs_compilation.cpp.o -MF avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/GamessInput_autogen/mocs_compilation.cpp.o.d -o avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/GamessInput_autogen/mocs_compilation.cpp.o -c avogadro/qtplugins/gamessinput/GamessInput_autogen/mocs_compilation.cpp In file included from avogadro/qtplugins/gamessinput/GamessInput_autogen/mocs_compilation.cpp:4: In file included from avogadro/qtplugins/gamessinput/GamessInput_autogen/EWIEGA46WW/moc_gamessinputdialog.cpp:10: avogadro/qtplugins/gamessinput/GamessInput_autogen/EWIEGA46WW/../../../../../../avogadrolibs-1.93.0/avogadro/qtplugins/gamessinput/gamessinputdialog.h:47:68: warning: 'QFlags' is deprecated: Use default constructor instead [-Wdeprecated-declarations] explicit GamessInputDialog(QWidget* parent_ = 0, Qt::WindowFlags f = 0); ^ /usr/local/include/qt5/QtCore/qflags.h:123:5: note: 'QFlags' has been explicitly marked deprecated here QT_DEPRECATED_X("Use default constructor instead") Q_DECL_CONSTEXPR inline QFlags(Zero) noexcept : i(0) {} ^ /usr/local/include/qt5/QtCore/qglobal.h:294:33: note: expanded from macro 'QT_DEPRECATED_X' # define QT_DEPRECATED_X(text) Q_DECL_DEPRECATED_X(text) ^ /usr/local/include/qt5/QtCore/qcompilerdetection.h:675:55: note: expanded from macro 'Q_DECL_DEPRECATED_X' # define Q_DECL_DEPRECATED_X(text) __attribute__ ((__deprecated__(text))) ^ 1 warning generated. [304/475] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/gamessinput/GamessInput_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/gamessinput -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -isystem /usr/local/include/qt5/QtNetwork -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/gamessinputdialog.cpp.o -MF avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/gamessinputdialog.cpp.o.d -o avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/gamessinputdialog.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/gamessinput/gamessinputdialog.cpp In file included from /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/gamessinput/gamessinputdialog.cpp:17: /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/gamessinput/gamessinputdialog.h:47:68: warning: 'QFlags' is deprecated: Use default constructor instead [-Wdeprecated-declarations] explicit GamessInputDialog(QWidget* parent_ = 0, Qt::WindowFlags f = 0); ^ /usr/local/include/qt5/QtCore/qflags.h:123:5: note: 'QFlags' has been explicitly marked deprecated here QT_DEPRECATED_X("Use default constructor instead") Q_DECL_CONSTEXPR inline QFlags(Zero) noexcept : i(0) {} ^ /usr/local/include/qt5/QtCore/qglobal.h:294:33: note: expanded from macro 'QT_DEPRECATED_X' # define QT_DEPRECATED_X(text) Q_DECL_DEPRECATED_X(text) ^ /usr/local/include/qt5/QtCore/qcompilerdetection.h:675:55: note: expanded from macro 'Q_DECL_DEPRECATED_X' # define Q_DECL_DEPRECATED_X(text) __attribute__ ((__deprecated__(text))) ^ 1 warning generated. [305/475] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/gamessinput/GamessInput_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/gamessinput -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -isystem /usr/local/include/qt5/QtNetwork -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/gamesshighlighter.cpp.o -MF avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/gamesshighlighter.cpp.o.d -o avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/gamesshighlighter.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/gamessinput/gamesshighlighter.cpp [306/475] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/gamessinput/GamessInput_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/gamessinput -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -isystem /usr/local/include/qt5/QtNetwork -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/gamessinput.cpp.o -MF avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/gamessinput.cpp.o.d -o avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/gamessinput.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/gamessinput/gamessinput.cpp In file included from /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/gamessinput/gamessinput.cpp:19: /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/gamessinput/gamessinputdialog.h:47:68: warning: 'QFlags' is deprecated: Use default constructor instead [-Wdeprecated-declarations] explicit GamessInputDialog(QWidget* parent_ = 0, Qt::WindowFlags f = 0); ^ /usr/local/include/qt5/QtCore/qflags.h:123:5: note: 'QFlags' has been explicitly marked deprecated here QT_DEPRECATED_X("Use default constructor instead") Q_DECL_CONSTEXPR inline QFlags(Zero) noexcept : i(0) {} ^ /usr/local/include/qt5/QtCore/qglobal.h:294:33: note: expanded from macro 'QT_DEPRECATED_X' # define QT_DEPRECATED_X(text) Q_DECL_DEPRECATED_X(text) ^ /usr/local/include/qt5/QtCore/qcompilerdetection.h:675:55: note: expanded from macro 'Q_DECL_DEPRECATED_X' # define Q_DECL_DEPRECATED_X(text) __attribute__ ((__deprecated__(text))) ^ 1 warning generated. 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avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/GamessInputPlugin.cpp.o -MF avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/GamessInputPlugin.cpp.o.d -o avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/GamessInputPlugin.cpp.o -c avogadro/qtplugins/gamessinput/GamessInputPlugin.cpp [308/475] : && /usr/local/bin/cmake -E rm -f lib/avogadro2/staticplugins/GamessInput.a && /nxb-bin/usr/bin/ar qc lib/avogadro2/staticplugins/GamessInput.a avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/GamessInput_autogen/mocs_compilation.cpp.o avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/gamessinputdialog.cpp.o avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/gamesshighlighter.cpp.o avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/gamessinput.cpp.o avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/GamessInputPlugin.cpp.o && /nxb-bin/usr/bin/ranlib lib/avogadro2/staticplugins/GamessInput.a && : [309/475] /nxb-bin/usr/bin/c++ 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-fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugin s/apbs/CMakeFiles/apbs.dir/apbs.cpp.o -MF avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/apbs.cpp.o.d -o avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/apbs.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/apbs/apbs.cpp [311/475] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/apbs/apbs_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/apbs -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -isystem /usr/local/include/qt5/QtNetwork -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugin s/apbs/CMakeFiles/apbs.dir/apbsdialog.cpp.o -MF avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/apbsdialog.cpp.o.d -o avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/apbsdialog.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/apbs/apbsdialog.cpp [312/475] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB 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-fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugin s/apbs/CMakeFiles/apbs.dir/opendxreader.cpp.o -MF avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/opendxreader.cpp.o.d -o avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/opendxreader.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/apbs/opendxreader.cpp [314/475] : && /usr/local/bin/cmake -E rm -f lib/avogadro2/staticplugins/apbs.a && /nxb-bin/usr/bin/ar qc lib/avogadro2/staticplugins/apbs.a avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/apbs_autogen/mocs_compilation.cpp.o avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/apbs.cpp.o avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/apbsdialog.cpp.o avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/apbsoutputdialog.cpp.o avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/opendxreader.cpp.o avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/apbsPlugin.cpp.o && /nxb-bin/usr/bin/ranlib lib/avogadro2/staticplugins/apbs.a && : [315/475] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/ballandstick && /usr/local/bin/cmake -E cmake_autogen /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen.dir/AutogenInfo.json Release && /usr/local/bin/cmake -E touch /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/ballandstick/BallStick_autogen/timestamp [316/475] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/ballandstick/BallStick_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/ballandstick -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.di r/BallStick_autogen/mocs_compilation.cpp.o -MF avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/BallStick_autogen/mocs_compilation.cpp.o.d -o avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/BallStick_autogen/mocs_compilation.cpp.o -c avogadro/qtplugins/ballandstick/BallStick_autogen/mocs_compilation.cpp [317/475] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/ballandstick/BallStick_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/ballandstick -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.di r/ballandstick.cpp.o -MF avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/ballandstick.cpp.o.d -o avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/ballandstick.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/ballandstick/ballandstick.cpp [318/475] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/ballandstick/BallStick_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/ballandstick -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.di r/BallStickPlugin.cpp.o -MF avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/BallStickPlugin.cpp.o.d -o avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/BallStickPlugin.cpp.o -c avogadro/qtplugins/ballandstick/BallStickPlugin.cpp [319/475] : && /usr/local/bin/cmake -E rm -f lib/avogadro2/staticplugins/BallStick.a && /nxb-bin/usr/bin/ar qc lib/avogadro2/staticplugins/BallStick.a avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/BallStick_autogen/mocs_compilation.cpp.o avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/ballandstick.cpp.o avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/BallStickPlugin.cpp.o && /nxb-bin/usr/bin/ranlib lib/avogadro2/staticplugins/BallStick.a && : [320/475] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/licorice && /usr/local/bin/cmake -E cmake_autogen /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen.dir/AutogenInfo.json Release && /usr/local/bin/cmake -E touch /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/licorice/Licorice_autogen/timestamp FAILED: avogadro/qtplugins/licorice/Licorice_autogen/timestamp cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/licorice && /usr/local/bin/cmake -E cmake_autogen /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen.dir/AutogenInfo.json Release && /usr/local/bin/cmake -E touch /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/licorice/Licorice_autogen/timestamp Fatal error 'thread 0xf31f3200 exits with resources held!' at line 321 in file /usr/local/poudriere/jails/head-armv6/usr/src/lib/libthr/thread/thr_exit.c (errno = 0) qemu: uncaught target signal 6 (Abort trap) - core dumped Abort trap ninja: build stopped: subcommand failed. *** Error code 1 Stop. make: stopped in /usr/ports/science/avogadrolibs
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