From owner-freebsd-pkg-fallout@freebsd.org Sun May 22 01:32:41 2016 Return-Path: Delivered-To: freebsd-pkg-fallout@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id 862E0B3BDBB for ; Sun, 22 May 2016 01:32:41 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from mailman.ysv.freebsd.org (unknown [127.0.1.3]) by mx1.freebsd.org (Postfix) with ESMTP id 7546C12ED for ; Sun, 22 May 2016 01:32:41 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: by mailman.ysv.freebsd.org (Postfix) id 74534B3BDBA; Sun, 22 May 2016 01:32:41 +0000 (UTC) Delivered-To: pkg-fallout@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id 73F10B3BDB7 for ; Sun, 22 May 2016 01:32:41 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from beefy6.nyi.freebsd.org (beefy6.nyi.freebsd.org [IPv6:2610:1c1:1:6080::16:e9]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mx1.freebsd.org (Postfix) with ESMTPS id 3847412EB for ; Sun, 22 May 2016 01:32:41 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from beefy6.nyi.freebsd.org (localhost [127.0.0.1]) by beefy6.nyi.freebsd.org (8.15.2/8.15.2) with ESMTP id u4M1WePd035827 for ; Sun, 22 May 2016 01:32:40 GMT (envelope-from pkg-fallout@FreeBSD.org) Received: (from root@localhost) by beefy6.nyi.freebsd.org (8.15.2/8.15.2/Submit) id u4M1WeKv035811; Sun, 22 May 2016 01:32:40 GMT (envelope-from pkg-fallout@FreeBSD.org) Date: Sun, 22 May 2016 01:32:40 GMT From: pkg-fallout@FreeBSD.org Message-Id: <201605220132.u4M1WeKv035811@beefy6.nyi.freebsd.org> To: pkg-fallout@FreeBSD.org Subject: [package - 101amd64-default][science/minc2] Failed for minc2-2.2.00_4, 1 in build X-BeenThere: freebsd-pkg-fallout@freebsd.org X-Mailman-Version: 2.1.22 Precedence: list List-Id: Fallout logs from package building List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Sun, 22 May 2016 01:32:41 -0000 You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: ports@FreeBSD.org Last committer: sunpoet@FreeBSD.org Ident: $FreeBSD: head/science/minc2/Makefile 413700 2016-04-20 20:42:39Z sunpoet $ Log URL: http://beefy6.nyi.freebsd.org/data/101amd64-default/415614/logs/minc2-2.2.00_4,1.log Build URL: http://beefy6.nyi.freebsd.org/build.html?mastername=101amd64-default&build=415614 Log: ====>> Building science/minc2 build started at Sun May 22 01:31:26 UTC 2016 port directory: /usr/ports/science/minc2 building for: FreeBSD 101amd64-default-job-01 10.1-RELEASE-p34 FreeBSD 10.1-RELEASE-p34 amd64 maintained by: ports@FreeBSD.org Makefile ident: $FreeBSD: head/science/minc2/Makefile 413700 2016-04-20 20:42:39Z sunpoet $ Poudriere version: 3.1.12 Host OSVERSION: 1100109 Jail OSVERSION: 1001000 ---Begin Environment--- SHELL=/bin/csh UNAME_v=FreeBSD 10.1-RELEASE-p34 UNAME_r=10.1-RELEASE-p34 BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 OPSYS=FreeBSD ARCH=amd64 SAVED_TERM= MASTERMNT=/usr/local/poudriere/data/.m/101amd64-default/ref UID=0 PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin _JAVA_VERSION_LIST_REGEXP=1.6\|1.7\|1.8\|1.6+\|1.7+\|1.8+ POUDRIERE_BUILD_TYPE=bulk PKGNAME=minc2-2.2.00_4,1 OSREL=10.1 _OSRELEASE=10.1-RELEASE-p34 PYTHONBASE=/usr/local OLDPWD=/ _SMP_CPUS=24 PWD=/usr/local/poudriere/data/.m/101amd64-default/ref/.p/pool HAVE_COMPAT_IA32_KERN=YES LINUX_OSRELEASE=2.6.32 MASTERNAME=101amd64-default SCRIPTPREFIX=/usr/local/share/poudriere _JAVA_VENDOR_LIST_REGEXP=openjdk\|oracle\|sun USER=root HOME=/root POUDRIERE_VERSION=3.1.12 SCRIPTPATH=/usr/local/share/poudriere/bulk.sh CONFIGURE_MAX_CMD_LEN=262144 LIBEXECPREFIX=/usr/local/libexec/poudriere LOCALBASE=/usr/local PACKAGE_BUILDING=yes _JAVA_OS_LIST_REGEXP=native\|linux OSVERSION=1001000 ---End Environment--- ---Begin OPTIONS List--- ---End OPTIONS List--- --CONFIGURE_ARGS-- --enable-shared=yes --enable-static=yes --prefix=/usr/local ${_LATE_CONFIGURE_ARGS} --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl ac_cv_path_PERL_PATH=/usr/local/bin/perl XDG_DATA_HOME=/wrkdirs/usr/ports/science/minc2/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/minc2/work HOME=/wrkdirs/usr/ports/science/minc2/work TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144 --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/science/minc2/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/minc2/work HOME=/wrkdirs/usr/ports/science/minc2/work TMPDIR="/tmp" NO_PIE=yes WITHOUT_DEBUG_FILES=yes WITHOUT_KERNEL_SYMBOLS=yes SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" CC="cc" CFLAGS="-O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing" CPP="cpp" CPPFLAGS="-I/usr/local/include" LDFLAGS=" -L/usr/local/lib -fstack-protector" LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 444" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- OSREL=10.1 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local PORTDOCS="" PORTEXAMPLES="" LIB32DIR=lib PERL_VERSION=5.20.3 PERL_VER=5.20 PERL5_MAN1=lib/perl5/site_perl/man/man1 PERL5_MAN3=lib/perl5/site_perl/man/man3 SITE_PERL=lib/perl5/site_perl SITE_ARCH=lib/perl5/site_perl/mach/5.20 DOCSDIR="share/doc/minc" EXAMPLESDIR="share/examples/minc" DATADIR="share/minc" WWWDIR="www/minc" ETCDIR="etc/minc" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/minc DOCSDIR=/usr/local/share/doc/minc EXAMPLESDIR=/usr/local/share/examples/minc WWWDIR=/usr/local/www/minc ETCDIR=/usr/local/etc/minc --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles #### /usr/local/etc/poudriere.d/make.conf #### DISABLE_MAKE_JOBS=poudriere ---End make.conf--- =================================================== ===> NOTICE: The minc port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> License MIT accepted by the user =========================================================================== =================================================== ===> minc2-2.2.00_4,1 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.7.2.txz [101amd64-default-job-01] Installing pkg-1.7.2... [101amd64-default-job-01] Extracting pkg-1.7.2: .......... done ===> minc2-2.2.00_4,1 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of minc2-2.2.00_4,1 =========================================================================== =================================================== =========================================================================== =================================================== ===> NOTICE: The minc port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> License MIT accepted by the user ===> Fetching all distfiles required by minc2-2.2.00_4,1 for building =========================================================================== =================================================== ===> NOTICE: The minc port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> License MIT accepted by the user ===> Fetching all distfiles required by minc2-2.2.00_4,1 for building => SHA256 Checksum OK for BIC-MNI-minc-release-2.2.00_GH0.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> NOTICE: The minc port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> License MIT accepted by the user ===> Fetching all distfiles required by minc2-2.2.00_4,1 for building ===> Extracting for minc2-2.2.00_4,1 => SHA256 Checksum OK for BIC-MNI-minc-release-2.2.00_GH0.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> Patching for minc2-2.2.00_4,1 ===> Applying FreeBSD patches for minc2-2.2.00_4,1 =========================================================================== =================================================== ===> minc2-2.2.00_4,1 depends on executable: autoconf-2.69 - not found ===> Installing existing package /packages/All/autoconf-2.69.txz [101amd64-default-job-01] Installing autoconf-2.69... [101amd64-default-job-01] `-- Installing indexinfo-0.2.4... [101amd64-default-job-01] `-- Extracting indexinfo-0.2.4: .... done [101amd64-default-job-01] `-- Installing autoconf-wrapper-20131203... [101amd64-default-job-01] `-- Extracting autoconf-wrapper-20131203: ........ done [101amd64-default-job-01] `-- Installing perl5-5.20.3_13... [101amd64-default-job-01] `-- Extracting perl5-5.20.3_13: .......... done [101amd64-default-job-01] `-- Installing m4-1.4.17_1,1... cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -MT progs/mincgen/genlib.o -MD -MP -MF $depbase.Tpo -c -o progs/mincgen/genlib.o progs/mincgen/genlib.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo progs/mincgen/getfill.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -MT progs/mincgen/getfill.o -MD -MP -MF $depbase.Tpo -c -o progs/mincgen/getfill.o progs/mincgen/getfill.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo progs/mincgen/init.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -MT progs/mincgen/init.o -MD -MP -MF $depbase.Tpo -c -o progs/mincgen/init.o progs/mincgen/init.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo progs/mincgen/load.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -MT progs/mincgen/load.o -MD -MP -MF $depbase.Tpo -c -o progs/mincgen/load.o progs/mincgen/load.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo progs/mincgen/main.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -MT progs/mincgen/main.o -MD -MP -MF $depbase.Tpo -c -o progs/mincgen/main.o progs/mincgen/main.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./ac_config_aux/ylwrap progs/mincgen/ncgentab.y y.tab.c progs/mincgen/ncgentab.c y.tab.h `echo progs/mincgen/ncgentab.c | sed -e s/cc$/hh/ -e s/cpp$/hpp/ -e s/cxx$/hxx/ -e s/c++$/h++/ -e s/c$/h/` y.output progs/mincgen/ncgentab.output -- bison -y -d --debug conflicts: 1 shift/reduce updating progs/mincgen/ncgentab.h depbase=`echo progs/mincgen/ncgentab.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -MT progs/mincgen/ncgentab.o -MD -MP -MF $depbase.Tpo -c -o progs/mincgen/ncgentab.o progs/mincgen/ncgentab.c &&\ mv -f $depbase.Tpo $depbase.Po progs/mincgen/ncgentab.c:1446:16: warning: implicit declaration of function 'yylex' is invalid in C99 [-Wimplicit-function-declaration] yychar = YYLEX; ^ progs/mincgen/ncgentab.c:795:16: note: expanded from macro 'YYLEX' # define YYLEX yylex () ^ progs/mincgen/ncgentab.c:2345:7: warning: implicit declaration of function 'yyerror' is invalid in C99 [-Wimplicit-function-declaration] yyerror (YY_("syntax error")); ^ 2 warnings generated. /bin/sh ./ac_config_aux/ylwrap progs/mincgen/ncgenyy.l lex.yy.c progs/mincgen/ncgenyy.c -- flex depbase=`echo progs/mincgen/ncgenyy.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -MT progs/mincgen/ncgenyy.o -MD -MP -MF $depbase.Tpo -c -o progs/mincgen/ncgenyy.o progs/mincgen/ncgenyy.c &&\ mv -f $depbase.Tpo $depbase.Po progs/mincgen/ncgenyy.l:59:5: warning: implicit declaration of function 'yyerror' is invalid in C99 [-Wimplicit-function-declaration] yyerror("string too long, truncated\n"); ^ progs/mincgen/ncgenyy.l:131:17: warning: implicit declaration of function 'lookup' is invalid in C99 [-Wimplicit-function-declaration] if ((yylval = lookup((char *)yytext)) == YYLVAL_NULL) { ^ progs/mincgen/ncgenyy.l:132:13: warning: implicit declaration of function 'install' is invalid in C99 [-Wimplicit-function-declaration] yylval = install((char *)yytext); ^ 3 warnings generated. /bin/sh ./libtool --tag=CC --mode=link cc -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -L/usr/local/lib -fstack-protector -o mincgen progs/mincgen/escapes.o progs/mincgen/genlib.o progs/mincgen/getfill.o progs/mincgen/init.o progs/mincgen/load.o progs/mincgen/main.o progs/mincgen/ncgentab.o progs/mincgen/ncgenyy.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -fstack-protector -o .libs/mincgen progs/mincgen/escapes.o progs/mincgen/genlib.o progs/mincgen/getfill.o progs/mincgen/init.o progs/mincgen/load.o progs/mincgen/main.o progs/mincgen/ncgentab.o progs/mincgen/ncgenyy.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/mincinfo/mincinfo.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -MT progs/mincinfo/mincinfo.o -MD -MP -MF $depbase.Tpo -c -o progs/mincinfo/mincinfo.o progs/mincinfo/mincinfo.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -L/usr/local/lib -fstack-protector -o mincinfo progs/mincinfo/mincinfo.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -fstack-protector -o .libs/mincinfo progs/mincinfo/mincinfo.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/minclookup/minclookup.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -MT progs/minclookup/minclookup.o -MD -MP -MF $depbase.Tpo -c -o progs/minclookup/minclookup.o progs/minclookup/minclookup.c &&\ mv -f $depbase.Tpo $depbase.Po progs/minclookup/minclookup.c:325:15: warning: enumeration value 'LU_TABLE' not handled in switch [-Wswitch] switch (lookup_type) { ^ 1 warning generated. /bin/sh ./libtool --tag=CC --mode=link cc -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -L/usr/local/lib -fstack-protector -o minclookup progs/minclookup/minclookup.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -fstack-protector -o .libs/minclookup progs/minclookup/minclookup.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/mincmakescalar/mincmakescalar.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -MT progs/mincmakescalar/mincmakescalar.o -MD -MP -MF $depbase.Tpo -c -o progs/mincmakescalar/mincmakescalar.o progs/mincmakescalar/mincmakescalar.c &&\ mv -f $depbase.Tpo $depbase.Po progs/mincmakescalar/mincmakescalar.c:366:18: warning: enumeration value 'CONV_DEFAULT' not handled in switch [-Wswitch] switch (program_data->conversion_type) { ^ progs/mincmakescalar/mincmakescalar.c:385:18: warning: enumeration values 'CONV_DEFAULT', 'CONV_GREY', and 'CONV_LINEAR' not handled in switch [-Wswitch] switch (program_data->conversion_type) { ^ 2 warnings generated. /bin/sh ./libtool --tag=CC --mode=link cc -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -L/usr/local/lib -fstack-protector -o mincmakescalar progs/mincmakescalar/mincmakescalar.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -fstack-protector -o .libs/mincmakescalar progs/mincmakescalar/mincmakescalar.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/mincmakevector/mincmakevector.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -MT progs/mincmakevector/mincmakevector.o -MD -MP -MF $depbase.Tpo -c -o progs/mincmakevector/mincmakevector.o progs/mincmakevector/mincmakevector.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -L/usr/local/lib -fstack-protector -o mincmakevector progs/mincmakevector/mincmakevector.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -fstack-protector -o .libs/mincmakevector progs/mincmakevector/mincmakevector.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/mincmath/mincmath.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -MT progs/mincmath/mincmath.o -MD -MP -MF $depbase.Tpo -c -o progs/mincmath/mincmath.o progs/mincmath/mincmath.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -L/usr/local/lib -fstack-protector -o mincmath progs/mincmath/mincmath.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -fstack-protector -o .libs/mincmath progs/mincmath/mincmath.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -Iprogs/mincmorph -I./progs/mincmorph -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -MT progs/mincmorph/mincmorph-mincmorph.o -MD -MP -MF progs/mincmorph/.deps/mincmorph-mincmorph.Tpo -c -o progs/mincmorph/mincmorph-mincmorph.o `test -f 'progs/mincmorph/mincmorph.c' || echo './'`progs/mincmorph/mincmorph.c progs/mincmorph/mincmorph.c:229:24: warning: data argument not used by format string [-Wformat-extra-args] argv[0], outfile); ^ 1 warning generated. mv -f progs/mincmorph/.deps/mincmorph-mincmorph.Tpo progs/mincmorph/.deps/mincmorph-mincmorph.Po cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -Iprogs/mincmorph -I./progs/mincmorph -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -MT progs/mincmorph/mincmorph-kernel_io.o -MD -MP -MF progs/mincmorph/.deps/mincmorph-kernel_io.Tpo -c -o progs/mincmorph/mincmorph-kernel_io.o `test -f 'progs/mincmorph/kernel_io.c' || echo './'`progs/mincmorph/kernel_io.c mv -f progs/mincmorph/.deps/mincmorph-kernel_io.Tpo progs/mincmorph/.deps/mincmorph-kernel_io.Po cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -Iprogs/mincmorph -I./progs/mincmorph -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -MT progs/mincmorph/mincmorph-kernel_ops.o -MD -MP -MF progs/mincmorph/.deps/mincmorph-kernel_ops.Tpo -c -o progs/mincmorph/mincmorph-kernel_ops.o `test -f 'progs/mincmorph/kernel_ops.c' || echo './'`progs/mincmorph/kernel_ops.c mv -f progs/mincmorph/.deps/mincmorph-kernel_ops.Tpo progs/mincmorph/.deps/mincmorph-kernel_ops.Po /bin/sh ./libtool --tag=CC --mode=link cc -Iprogs/mincmorph -I./progs/mincmorph -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -L/usr/local/lib -fstack-protector -o mincmorph progs/mincmorph/mincmorph-mincmorph.o progs/mincmorph/mincmorph-kernel_io.o progs/mincmorph/mincmorph-kernel_ops.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -Iprogs/mincmorph -I./progs/mincmorph -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -fstack-protector -o .libs/mincmorph progs/mincmorph/mincmorph-mincmorph.o progs/mincmorph/mincmorph-kernel_io.o progs/mincmorph/mincmorph-kernel_ops.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/mincresample/mincresample.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -MT progs/mincresample/mincresample.o -MD -MP -MF $depbase.Tpo -c -o progs/mincresample/mincresample.o progs/mincresample/mincresample.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo progs/mincresample/resample_volumes.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -MT progs/mincresample/resample_volumes.o -MD -MP -MF $depbase.Tpo -c -o progs/mincresample/resample_volumes.o progs/mincresample/resample_volumes.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo progs/Proglib/convert_origin_to_start.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -MT progs/Proglib/convert_origin_to_start.o -MD -MP -MF $depbase.Tpo -c -o progs/Proglib/convert_origin_to_start.o progs/Proglib/convert_origin_to_start.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -L/usr/local/lib -fstack-protector -o mincresample progs/mincresample/mincresample.o progs/mincresample/resample_volumes.o progs/Proglib/convert_origin_to_start.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -fstack-protector -o .libs/mincresample progs/mincresample/mincresample.o progs/mincresample/resample_volumes.o progs/Proglib/convert_origin_to_start.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/mincreshape/mincreshape.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -MT progs/mincreshape/mincreshape.o -MD -MP -MF $depbase.Tpo -c -o progs/mincreshape/mincreshape.o progs/mincreshape/mincreshape.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo progs/mincreshape/copy_data.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -MT progs/mincreshape/copy_data.o -MD -MP -MF $depbase.Tpo -c -o progs/mincreshape/copy_data.o progs/mincreshape/copy_data.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -L/usr/local/lib -fstack-protector -o mincreshape progs/mincreshape/mincreshape.o progs/mincreshape/copy_data.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -fstack-protector -o .libs/mincreshape progs/mincreshape/mincreshape.o progs/mincreshape/copy_data.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -Iprogs/mincsample -I./progs/mincsample -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -MT progs/mincsample/mincsample-mincsample.o -MD -MP -MF progs/mincsample/.deps/mincsample-mincsample.Tpo -c -o progs/mincsample/mincsample-mincsample.o `test -f 'progs/mincsample/mincsample.c' || echo './'`progs/mincsample/mincsample.c mv -f progs/mincsample/.deps/mincsample-mincsample.Tpo progs/mincsample/.deps/mincsample-mincsample.Po cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -Iprogs/mincsample -I./progs/mincsample -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -MT progs/mincsample/mincsample-mt19937ar.o -MD -MP -MF progs/mincsample/.deps/mincsample-mt19937ar.Tpo -c -o progs/mincsample/mincsample-mt19937ar.o `test -f 'progs/mincsample/mt19937ar.c' || echo './'`progs/mincsample/mt19937ar.c mv -f progs/mincsample/.deps/mincsample-mt19937ar.Tpo progs/mincsample/.deps/mincsample-mt19937ar.Po /bin/sh ./libtool --tag=CC --mode=link cc -Iprogs/mincsample -I./progs/mincsample -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -L/usr/local/lib -fstack-protector -o mincsample progs/mincsample/mincsample-mincsample.o progs/mincsample/mincsample-mt19937ar.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -Iprogs/mincsample -I./progs/mincsample -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -fstack-protector -o .libs/mincsample progs/mincsample/mincsample-mincsample.o progs/mincsample/mincsample-mt19937ar.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/mincstats/mincstats.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -MT progs/mincstats/mincstats.o -MD -MP -MF $depbase.Tpo -c -o progs/mincstats/mincstats.o progs/mincstats/mincstats.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -L/usr/local/lib -fstack-protector -o mincstats progs/mincstats/mincstats.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -fstack-protector -o .libs/mincstats progs/mincstats/mincstats.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/minctoraw/minctoraw.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -MT progs/minctoraw/minctoraw.o -MD -MP -MF $depbase.Tpo -c -o progs/minctoraw/minctoraw.o progs/minctoraw/minctoraw.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -L/usr/local/lib -fstack-protector -o minctoraw progs/minctoraw/minctoraw.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -fstack-protector -o .libs/minctoraw progs/minctoraw/minctoraw.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/mincview/invert_raw_image.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -MT progs/mincview/invert_raw_image.o -MD -MP -MF $depbase.Tpo -c -o progs/mincview/invert_raw_image.o progs/mincview/invert_raw_image.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -L/usr/local/lib -fstack-protector -o invert_raw_image progs/mincview/invert_raw_image.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -fstack-protector -o .libs/invert_raw_image progs/mincview/invert_raw_image.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/mincwindow/mincwindow.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -MT progs/mincwindow/mincwindow.o -MD -MP -MF $depbase.Tpo -c -o progs/mincwindow/mincwindow.o progs/mincwindow/mincwindow.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -L/usr/local/lib -fstack-protector -o mincwindow progs/mincwindow/mincwindow.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -fstack-protector -o .libs/mincwindow progs/mincwindow/mincwindow.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/rawtominc/rawtominc.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -MT progs/rawtominc/rawtominc.o -MD -MP -MF $depbase.Tpo -c -o progs/rawtominc/rawtominc.o progs/rawtominc/rawtominc.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -L/usr/local/lib -fstack-protector -o rawtominc progs/rawtominc/rawtominc.o progs/Proglib/convert_origin_to_start.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -fstack-protector -o .libs/rawtominc progs/rawtominc/rawtominc.o progs/Proglib/convert_origin_to_start.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/xfm/transformtags.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -MT progs/xfm/transformtags.o -MD -MP -MF $depbase.Tpo -c -o progs/xfm/transformtags.o progs/xfm/transformtags.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -L/usr/local/lib -fstack-protector -o transformtags progs/xfm/transformtags.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -fstack-protector -o .libs/transformtags progs/xfm/transformtags.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/xfm/xfm2def.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -MT progs/xfm/xfm2def.o -MD -MP -MF $depbase.Tpo -c -o progs/xfm/xfm2def.o progs/xfm/xfm2def.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -L/usr/local/lib -fstack-protector -o xfm2def progs/xfm/xfm2def.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -fstack-protector -o .libs/xfm2def progs/xfm/xfm2def.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/xfm/xfmconcat.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -MT progs/xfm/xfmconcat.o -MD -MP -MF $depbase.Tpo -c -o progs/xfm/xfmconcat.o progs/xfm/xfmconcat.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -L/usr/local/lib -fstack-protector -o xfmconcat progs/xfm/xfmconcat.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -fstack-protector -o .libs/xfmconcat progs/xfm/xfmconcat.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/xfm/xfminvert.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -MT progs/xfm/xfminvert.o -MD -MP -MF $depbase.Tpo -c -o progs/xfm/xfminvert.o progs/xfm/xfminvert.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -L/usr/local/lib -fstack-protector -o xfminvert progs/xfm/xfminvert.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -fstack-protector -o .libs/xfminvert progs/xfm/xfminvert.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/mincconvert/mincconvert.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -MT progs/mincconvert/mincconvert.o -MD -MP -MF $depbase.Tpo -c -o progs/mincconvert/mincconvert.o progs/mincconvert/mincconvert.c &&\ mv -f $depbase.Tpo $depbase.Po progs/mincconvert/mincconvert.c:214:14: warning: implicit declaration of function 'micreatex' is invalid in C99 [-Wimplicit-function-declaration] new_fd = micreatex(new_fname, flags, &opts); ^ 1 warning generated. /bin/sh ./libtool --tag=CC --mode=link cc -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -L/usr/local/lib -fstack-protector -o mincconvert progs/mincconvert/mincconvert.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -fstack-protector -o .libs/mincconvert progs/mincconvert/mincconvert.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/mincdump/mincdump.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -O2 -pipe -Wno-error=return-type -fstack-protector -fno-strict-aliasing -MT progs/mincdump/mincdump.o -MD -MP -MF $depbase.Tpo -c -o progs/mincdump/mincdump.o progs/mincdump/mincdump.c &&\ mv -f $depbase.Tpo $depbase.Po In file included from progs/mincdump/mincdump.c:18: progs/mincdump/mincdump.h:18:7: error: expected '}' enum {false=0, true=1}; ^ /usr/include/stdbool.h:34:15: note: expanded from macro 'false' #define false 0 ^ progs/mincdump/mincdump.h:18:6: note: to match this '{' enum {false=0, true=1}; ^ 1 error generated. Makefile:2659: recipe for target 'progs/mincdump/mincdump.o' failed gmake[3]: *** [progs/mincdump/mincdump.o] Error 1 gmake[3]: Leaving directory '/wrkdirs/usr/ports/science/minc2/work/minc-release-2.2.00' Makefile:3066: recipe for target 'all-recursive' failed gmake[2]: *** [all-recursive] Error 1 gmake[2]: Leaving directory '/wrkdirs/usr/ports/science/minc2/work/minc-release-2.2.00' Makefile:1348: recipe for target 'all' failed gmake[1]: *** [all] Error 2 gmake[1]: Leaving directory '/wrkdirs/usr/ports/science/minc2/work/minc-release-2.2.00' *** Error code 1 Stop. make: stopped in /usr/ports/science/minc2