From owner-svn-ports-all@FreeBSD.ORG Tue May 13 07:04:18 2014 Return-Path: Delivered-To: svn-ports-all@freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) (using TLSv1 with cipher ADH-AES256-SHA (256/256 bits)) (No client certificate requested) by hub.freebsd.org (Postfix) with ESMTPS id 4430065A; Tue, 13 May 2014 07:04:18 +0000 (UTC) Received: from svn.freebsd.org (svn.freebsd.org [IPv6:2001:1900:2254:2068::e6a:0]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mx1.freebsd.org (Postfix) with ESMTPS id 317D82438; Tue, 13 May 2014 07:04:18 +0000 (UTC) Received: from svn.freebsd.org ([127.0.1.70]) by svn.freebsd.org (8.14.8/8.14.8) with ESMTP id s4D74IfY020148; Tue, 13 May 2014 07:04:18 GMT (envelope-from wen@svn.freebsd.org) Received: (from wen@localhost) by svn.freebsd.org (8.14.8/8.14.8/Submit) id s4D74HFT020144; Tue, 13 May 2014 07:04:17 GMT (envelope-from wen@svn.freebsd.org) Message-Id: <201405130704.s4D74HFT020144@svn.freebsd.org> From: Wen Heping Date: Tue, 13 May 2014 07:04:17 +0000 (UTC) To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r353921 - head/biology/libsbml X-SVN-Group: ports-head MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit X-BeenThere: svn-ports-all@freebsd.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: SVN commit messages for the ports tree List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 13 May 2014 07:04:18 -0000 Author: wen Date: Tue May 13 07:04:17 2014 New Revision: 353921 URL: http://svnweb.freebsd.org/changeset/ports/353921 QAT: https://qat.redports.org/buildarchive/r353921/ Log: - Update to 5.10.0 Modified: head/biology/libsbml/Makefile head/biology/libsbml/distinfo head/biology/libsbml/pkg-plist Modified: head/biology/libsbml/Makefile ============================================================================== --- head/biology/libsbml/Makefile Tue May 13 06:59:44 2014 (r353920) +++ head/biology/libsbml/Makefile Tue May 13 07:04:17 2014 (r353921) @@ -2,7 +2,7 @@ # $FreeBSD$ PORTNAME= libsbml -PORTVERSION= 5.9.0 +PORTVERSION= 5.10.0 CATEGORIES= biology devel MASTER_SITES= SF MASTER_SITE_SUBDIR= sbml/${PORTNAME}/${PORTVERSION}/stable @@ -17,7 +17,7 @@ LIB_DEPENDS= libxml2.so:${PORTSDIR}/text OPTIONS_DEFINE= PYTHON RUBY EXAMPLES -USES= gmake +USES= gmake libtool GNU_CONFIGURE= yes USE_LDCONFIG= yes WRKSRC= ${WRKDIR}/${PORTNAME}-${PORTVERSION} Modified: head/biology/libsbml/distinfo ============================================================================== --- head/biology/libsbml/distinfo Tue May 13 06:59:44 2014 (r353920) +++ head/biology/libsbml/distinfo Tue May 13 07:04:17 2014 (r353921) @@ -1,2 +1,2 @@ -SHA256 (libSBML-5.9.0-core-src.tar.gz) = 8991e4a6876721999433495b747b790af7981ae57b485e6c92b7fbb105bd7e96 -SIZE (libSBML-5.9.0-core-src.tar.gz) = 11478158 +SHA256 (libSBML-5.10.0-core-src.tar.gz) = c7e733443caaf4615e90a29111ff988b89b1c9a679de0a9737fc2a86840df1e0 +SIZE (libSBML-5.10.0-core-src.tar.gz) = 11577010 Modified: head/biology/libsbml/pkg-plist ============================================================================== --- head/biology/libsbml/pkg-plist Tue May 13 06:59:44 2014 (r353920) +++ head/biology/libsbml/pkg-plist Tue May 13 07:04:17 2014 (r353921) @@ -137,6 +137,7 @@ include/sbml/conversion/SBMLInferUnitsCo include/sbml/conversion/SBMLInitialAssignmentConverter.h include/sbml/conversion/SBMLLevelVersionConverter.h include/sbml/conversion/SBMLLocalParameterConverter.h +include/sbml/conversion/SBMLReactionConverter.h include/sbml/conversion/SBMLRuleConverter.h include/sbml/conversion/SBMLStripPackageConverter.h include/sbml/conversion/SBMLUnitsConverter.h @@ -165,9 +166,9 @@ include/sbml/validator/SBMLInternalValid include/sbml/validator/SBMLValidator.h include/sbml/xml/XMLConstructorException.h include/sbml/xml/XMLLogOverride.h -lib/libsbml.so.14 +lib/libsbml.so.5.10.0 +lib/libsbml.so.5 lib/libsbml.so -lib/libsbml.la lib/libsbml.a %%WITH_PYTHON%%%%PYTHON_SITELIBDIR%%/libsbml/_libsbml.so %%WITH_PYTHON%%%%PYTHON_SITELIBDIR%%/libsbml.pth @@ -489,3 +490,35 @@ lib/libsbml.a @dirrm include/sbml/validator @dirrm include/sbml/xml @dirrm include/sbml/ +include/sbml/extension/ASTBasePlugin.h +include/sbml/math/ASTBase.h +include/sbml/math/ASTBinaryFunctionNode.h +include/sbml/math/ASTCSymbol.h +include/sbml/math/ASTCSymbolAvogadroNode.h +include/sbml/math/ASTCSymbolDelayNode.h +include/sbml/math/ASTCSymbolTimeNode.h +include/sbml/math/ASTCiFunctionNode.h +include/sbml/math/ASTCiNumberNode.h +include/sbml/math/ASTCnBase.h +include/sbml/math/ASTCnExponentialNode.h +include/sbml/math/ASTCnIntegerNode.h +include/sbml/math/ASTCnRationalNode.h +include/sbml/math/ASTCnRealNode.h +include/sbml/math/ASTConstantNumberNode.h +include/sbml/math/ASTFunction.h +include/sbml/math/ASTFunctionBase.h +include/sbml/math/ASTLambdaFunctionNode.h +include/sbml/math/ASTNaryFunctionNode.h +include/sbml/math/ASTNumber.h +include/sbml/math/ASTPiecewiseFunctionNode.h +include/sbml/math/ASTQualifierNode.h +include/sbml/math/ASTSemanticsNode.h +include/sbml/math/ASTTypes.h +include/sbml/math/ASTUnaryFunctionNode.h +include/sbml/util/PrefixTransformer.h +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/convertReactions.cpp +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/layout/CMakeLists.txt +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/csharp/layout/CMakeLists.txt +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/java/layout/CMakeLists.txt +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/layout-package.cmake +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/python/layout/convertLayout.py