From owner-freebsd-ports@FreeBSD.ORG Tue Feb 11 12:32:06 2014 Return-Path: Delivered-To: freebsd-ports@freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [8.8.178.115]) (using TLSv1 with cipher ADH-AES256-SHA (256/256 bits)) (No client certificate requested) by hub.freebsd.org (Postfix) with ESMTPS id 8F61F517 for ; Tue, 11 Feb 2014 12:32:06 +0000 (UTC) Received: from mail-ob0-x22e.google.com (mail-ob0-x22e.google.com [IPv6:2607:f8b0:4003:c01::22e]) (using TLSv1 with cipher ECDHE-RSA-RC4-SHA (128/128 bits)) (No client certificate requested) by mx1.freebsd.org (Postfix) with ESMTPS id 4FF5A1BDC for ; Tue, 11 Feb 2014 12:32:06 +0000 (UTC) Received: by mail-ob0-f174.google.com with SMTP id uy5so8667526obc.5 for ; Tue, 11 Feb 2014 04:32:05 -0800 (PST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20120113; h=sender:from:to:cc:subject:references:date:in-reply-to:message-id :user-agent:mime-version:content-type; bh=MCurccIci/k9XEg7+B/ERlUizQA6+iab1q+IB0pyK2k=; b=ZcT18o4kZtGvF42Oy8ny7Z5/hqT3qTF/2DfBcpBpHmF3ApftWPP4KYBHLFdh4PMuNQ 3kEmRW9+H/pIImBp7vOWbaxRN2ir7HGEQ/M7fZhbO8YBjtgHN3CeWpUKloGqcea6Hihz 7NBLxMeVibFPgDFOlf/MDwhEse4r71ae/mzTFTGABa/BeMMlIlNUXuUz28v7a5jnqF2F q2Gqbongf0/dugFcg/J3GIipM+gLLojnDHzFrY1N2PBe0BWGzvKeNGm68yyOAyQGtRNJ Jv+eC0AAbOeLJbRC6e9seYB64CiUNlFSpDELm7wap7iHQld35MfzWgN43tOVkklYi2ze xpOw== X-Received: by 10.60.16.168 with SMTP id h8mr32064873oed.32.1392121925560; Tue, 11 Feb 2014 04:32:05 -0800 (PST) Received: from rachacuca.gmail.com ([2600:3c00::f03c:91ff:fe96:db74]) by mx.google.com with ESMTPSA id ei15sm113382775oeb.2.2014.02.11.04.32.04 for (version=TLSv1.2 cipher=ECDHE-RSA-AES128-GCM-SHA256 bits=128/128); Tue, 11 Feb 2014 04:32:05 -0800 (PST) Sender: Raphael Kubo da Costa From: Raphael Kubo da Costa To: Ajtim Subject: Re: avogadro update References: <29077926.ZYpKY5iuuV@lumiwa.farms.net> <1767572.5c1Ad5lD1u@lumiwa.farms.net> <838uth28ye.fsf@FreeBSD.org> <2951460.jLzIRIisUA@lumiwa.farms.net> Date: Tue, 11 Feb 2014 10:31:58 -0200 In-Reply-To: <2951460.jLzIRIisUA@lumiwa.farms.net> (Ajtim's message of "Tue, 11 Feb 2014 07:29:09 -0500") Message-ID: <834n4525kx.fsf_-_@FreeBSD.org> User-Agent: Gnus/5.130007 (Ma Gnus v0.7) Emacs/24.3 (gnu/linux) MIME-Version: 1.0 Content-Type: text/plain Cc: kde-freebsd@kde.org, freebsd-ports@FreeBSD.org X-BeenThere: freebsd-ports@freebsd.org X-Mailman-Version: 2.1.17 Precedence: list List-Id: Porting software to FreeBSD List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 11 Feb 2014 12:32:06 -0000 Ajtim writes: > -- [4/5] Numpy Module > Traceback (most recent call last): > File "", line 1, in > File "/usr/local/lib/python2.7/site-packages/numpy/__init__.py", line 137, in > import add_newdocs > File "/usr/local/lib/python2.7/site-packages/numpy/add_newdocs.py", line 9, in > from numpy.lib import add_newdoc > File "/usr/local/lib/python2.7/site-packages/numpy/lib/__init__.py", line 13, in > from polynomial import * > File "/usr/local/lib/python2.7/site-packages/numpy/lib/polynomial.py", line 17, in > from numpy.linalg import eigvals, lstsq, inv > File "/usr/local/lib/python2.7/site-packages/numpy/linalg/__init__.py", line 48, in > from linalg import * > File "/usr/local/lib/python2.7/site-packages/numpy/linalg/linalg.py", line 23, in > from numpy.linalg import lapack_lite > ImportError: /usr/local/lib/libalapack.so.2: Undefined symbol "cblas_zswap" > -- Numpy NOT found - Python support disabled. > CMake Warning at CMakeLists.txt:277 (message): > Not all python dependencies are found - Python support diabled There you go ^ Looks like you need to rebuild lapack, blas or something related to it (some numpy dependency at least).