Date: Tue, 29 Jun 2021 16:56:02 GMT From: pkg-fallout@FreeBSD.org To: pkg-fallout@FreeBSD.org Subject: [package - main-riscv64-default][biology/ncbi-blast+] Failed for ncbi-blast+-2.11.0_1 in build Message-ID: <202106291656.15TGu2qv023916@beefy7.nyi.freebsd.org>
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You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: jwb@FreeBSD.org Log URL: http://beefy7.nyi.freebsd.org/data/main-riscv64-default/p1ac2d7ea8e41_s857cde693f/logs/ncbi-blast+-2.11.0_1.log Build URL: http://beefy7.nyi.freebsd.org/build.html?mastername=main-riscv64-default&build=p1ac2d7ea8e41_s857cde693f Log: =>> Building biology/ncbi-blast+ build started at Tue Jun 29 16:52:25 UTC 2021 port directory: /usr/ports/biology/ncbi-blast+ package name: ncbi-blast+-2.11.0_1 building for: FreeBSD main-riscv64-default-job-09 14.0-CURRENT FreeBSD 14.0-CURRENT 1400024 riscv maintained by: jwb@FreeBSD.org Makefile ident: Poudriere version: 3.2.8-8-gaf08dbda Host OSVERSION: 1400008 Jail OSVERSION: 1400024 Job Id: 09 !!! Jail is newer than host. (Jail: 1400024, Host: 1400008) !!! !!! This is not supported. !!! !!! Host kernel must be same or newer than jail. !!! !!! Expect build failures. !!! ---Begin Environment--- SHELL=/bin/csh UNAME_p=riscv64 UNAME_m=riscv ABI_FILE=/usr/lib/crt1.o OSVERSION=1400024 UNAME_v=FreeBSD 14.0-CURRENT 1400024 UNAME_r=14.0-CURRENT BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local QEMU_EMULATING=1 USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-8-gaf08dbda MASTERMNT=/usr/local/poudriere/data/.m/main-riscv64-default/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= PWD=/usr/local/poudriere/data/.m/main-riscv64-default/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=main-riscv64-default SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/main-riscv64-default/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- jwb@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- AR="ar cr" --without-boost --libdir=/usr/local/lib/ncbi-tools++ --prefix=/usr/local ${_LATE_CONFIGURE_ARGS} --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl ac_cv_path_PERL_PATH=/usr/local/bin/perl PERL_USE_UNSAFE_INC=1 PYTHON="/usr/local/bin/python3.8" XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/ncbi-blast+/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh CMAKE_PREFIX_PATH="/usr/local" CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288 --End CONFIGURE_ENV-- --MAKE_ENV-- PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/ncbi-blast+/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -march=rv64imafdc -mabi=lp64d -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing " CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS="-isystem /usr/local/include" LDFLAGS=" -fstack-protector-strong -L/usr/local/lib " LIBS="" CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -march=rv64imafdc -mabi=lp64d -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="insta ll -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- PYTHON_INCLUDEDIR=include/python3.8 PYTHON_LIBDIR=lib/python3.8 PYTHON_PLATFORM=freebsd14 PYTHON_SITELIBDIR=lib/python3.8/site-packages PYTHON_SUFFIX=38 PYTHON_EXT_SUFFIX=.cpython-38 PYTHON_VER=3.8 PYTHON_VERSION=python3.8 PYTHON2="@comment " PYTHON3="" OSREL=14.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib PERL_VERSION=5.32.1 PERL_VER=5.32 PERL5_MAN1=lib/perl5/site_perl/man/man1 PERL5_MAN3=lib/perl5/site_perl/man/man3 SITE_PERL=lib/perl5/site_perl SITE_ARCH=lib/perl5/site_perl/mach/5.32 DOCSDIR="share/doc/ncbi-blast+" EXAMPLESDIR="share/examples/ncbi-blast+" DATADIR="share/ncbi-blast+" WWWDIR="www/ncbi-blast+" ETCDIR="etc/ncbi-blast+" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/ncbi-blast+ DOCSDIR=/usr/local/share/doc/ncbi-blast+ EXAMPLESDIR=/usr/local/share/examples/ncbi-blast+ WWWDIR=/usr/local/www/ncbi-blast+ ETCDIR=/usr/local/etc/ncbi-blast+ --End SUB_LIST-- ---Begin make.conf--- .sinclude "/etc/make.nxb.conf" USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes MACHINE=riscv MACHINE_ARCH=riscv64 ARCH=${MACHINE_ARCH} #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 #### /usr/ports/Mk/Scripts/ports_env.sh #### _CCVERSION_9d218390=FreeBSD clang version 12.0.1 (git@github.com:llvm/llvm-project.git llvmorg-12.0.1-rc2-0-ge7dac564cd0e) Target: riscv64-unknown-freebsd14.0 Thread model: posix InstalledDir: /nxb-bin/usr/bin _ALTCCVERSION_9d218390=none _CXXINTERNAL_9c45a5b1=FreeBSD clang version 12.0.1 (git@github.com:llvm/llvm-project.git llvmorg-12.0.1-rc2-0-ge7dac564cd0e) Target: riscv64-unknown-freebsd14.0 Thread model: posix InstalledDir: /nxb-bin/usr/bin "/nxb-bin/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--enable-new-dtags" "-m" "elf64lriscv" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_9d218390_58173849=yes CC_OUTPUT_9d218390_9bdba57c=yes CC_OUTPUT_9d218390_6a4fe7f5=yes CC_OUTPUT_9d218390_6bcac02b=yes CC_OUTPUT_9d218390_67d20829=yes CC_OUTPUT_9d218390_bfa62e83=yes CC_OUTPUT_9d218390_f0b4d593=yes CC_OUTPUT_9d218390_308abb44=yes CC_OUTPUT_9d218390_f00456e5=yes CC_OUTPUT_9d218390_65ad290d=yes CC_OUTPUT_9d218390_f2776b26=yes CC_OUTPUT_9d218390_b2657cc3=yes CC_OUTPUT_9d218390_380987f7=yes CC_OUTPUT_9d218390_160933ec=yes CC_OUTPUT_9d218390_fb62803b=yes _OBJC_CCVERSION_9d218390=FreeBSD clang version 12.0.1 (git@github.com:llvm/llvm-project.git llvmorg-12.0.1-rc2-0-ge7dac564cd0e) Target: riscv64-unknown-freebsd14.0 Thread model: posix InstalledDir: /nxb-bin/usr/bin _OBJC_ALTCCVERSION_9d218390=none ARCH=riscv64 OPSYS=FreeBSD _OSRELEASE=14.0-CURRENT OSREL=14.0 OSVERSION=1400024 PYTHONBASE=/usr/local CONFIGURE_MAX_CMD_LEN=524288 HAVE_PORTS_ENV=1 #### Misc Poudriere #### GID=0 UID=0 DISABLE_MAKE_JOBS=poudriere ---End make.conf--- ---Begin make.nxb.conf--- CC=/nxb-bin/usr/bin/cc CPP=/nxb-bin/usr/bin/cpp CXX=/nxb-bin/usr/bin/c++ NM=/nxb-bin/usr/bin/nm LD=/nxb-bin/usr/bin/ld OBJCOPY=/nxb-bin/usr/bin/objcopy SIZE=/nxb-bin/usr/bin/size STRIPBIN=/nxb-bin/usr/bin/strip SED=/nxb-bin/usr/bin/sed RANLIB=/nxb-bin/usr/bin/ranlib YACC=/nxb-bin/usr/bin/yacc MAKE=/nxb-bin/usr/bin/make STRINGS=/nxb-bin/usr/bin/strings AWK=/nxb-bin/usr/bin/awk FLEX=/nxb-bin/usr/bin/flex ---End make.nxb.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===> License PD accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===> ncbi-blast+-2.11.0_1 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.16.3.txz [main-riscv64-default-job-09] Installing pkg-1.16.3... [main-riscv64-default-job-09] Extracting pkg-1.16.3: .......... done ===> ncbi-blast+-2.11.0_1 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of ncbi-blast+-2.11.0_1 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> License PD accepted by the user ===> Fetching all distfiles required by ncbi-blast+-2.11.0_1 for building =========================================================================== =======================<phase: checksum >============================ ===> License PD accepted by the user ===> Fetching all distfiles required by ncbi-blast+-2.11.0_1 for building <snip> strip run_with_lock /bin/sh /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/scripts/common/impl/if_diff.sh /bin/ln -f run_with_lock /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/bin /bin/ln -f run_with_lock /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/bin/run_with_lock gmake[2]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/build-system/helpers' gmake[1]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/build-system/helpers' Platform not defined for FreeBSD riscv -- please fix me Prebuilt project_tree_builder not found =============================================================================== NCBI C++ Toolkit documentation: Online: http://www.ncbi.nlm.nih.gov/toolkit/doc/book/ Local: ./doc/public/index.html For the available configuration flags run: ./configure --help CFLAGS = -Wall -Wno-format-y2k -pthread -fopenmp -O2 -pipe -march=rv64imafdc -mabi=lp64d -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -Wno-deprecated-register -fPIC CXXFLAGS = -Wall -Wno-format-y2k -pthread -fopenmp -O2 -pipe -march=rv64imafdc -mabi=lp64d -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -Wno-deprecated-register -fPIC CPPFLAGS = -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -isystem /usr/local/include -D_MT -D_REENTRANT -D_THREAD_SAFE -D__RUNETYPE_INTERNAL LDFLAGS = -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -fstack-protector-strong -L/usr/local/lib -O LIBRARIES: build as static by default FEATURES: PSGLoader LLVMClang Clang MT LFS DLL unix WinMain BSD PACKAGES: enabled: Iconv Z BZ2 LZO PCRE MBEDTLS GMP GMP NETTLE NETTLE OPENSSL KRB5 PYTHON PERL SQLITE3 MAGIC LMDB LIBUV NGHTTP2 disabled: UUID FUSE LIBUNWIND LIBDW BACKWARD_CPP LocalZ LocalBZ2 ZSTD LocalPCRE GCRYPT GNUTLS CURL Sybase DBLib FreeTDS MySQL BerkeleyDB BerkeleyDB++ ODBC PYTHON25 PYTHON26 PYTHON27 PYTHON3 Boost.Chrono Boost.Filesystem Boost.Iostreams Boost.Program-Options Boost.Regex Boost.Serialization Boost.Spirit Boost.System Boost.Test Boost.Test.Included Boost.Thread C-Toolkit OpenGL MESA GLUT GLEW wxWidgets wx2.8 Fast-CGI LocalSSS LocalMSGMAIL2 SSSUTILS LocalNCBILS NCBILS2 SSSDB SP ORBacus ICU EXPAT SABLOT LIBXML LIBXSLT LIBEXSLT Xerces Xalan Zorba SQLITE3ASYNC VDB NGS OECHEM SGE MUPARSER HDF5 JPEG PNG TIFF GIF UNGIF XPM GL2PS FreeType FTGL MIMETIC GSOAP AVRO Cereal SASL2 MONGODB MONGODB3 LEVELDB GMOCK LAPACK LocalLMDB LIBSSH2 CASSANDRA H2O INFLUXDB LIBXLSXWRITER PROTOBUF GRPC MSGSL AWS_SDK HIREDIS APACHE_ARROW LIBRDKAFKA CPPKAFKA PROJECTS: enabled: cgi serial objects dbapi app algo disabled: local_lbsm connext ncbi_crypt bdb ctools gui gbench Tools / flags / paths: /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/Makefile.mk Configuration header: /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/inc/ncbiconf_unix.h To build everything: cd /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build && /usr/local/bin/gmake all_r or simply run /usr/local/bin/gmake in the current directory ******* CONFIGURATION SUCCESSFUL ******* =========================================================================== =======================<phase: build >============================ ===> Building for ncbi-blast+-2.11.0_1 gmake[1]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++' if test -f /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/Makefile.flat; then \ cd /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build && gmake -f Makefile.flat; \ elif test -s ""; then \ cd /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build && gmake -w all_p; \ else \ cd /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build && gmake -w all_r; \ fi gmake[2]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build' Build session ID: b0041197-d8fa-11eb-a5a5-a5a5a5a5a5a5 /bin/mkdir -p `/usr/bin/dirname /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/ctools/Makefile.in` test -f /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/ctools/Makefile.in || /bin/cp -p /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/build-system/Makefile.in.skel /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/ctools/Makefile.in /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/scripts/common/impl/update_configurable.sh /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT ctools/Makefile config.status: creating /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/ctools/Makefile /bin/mkdir -p `/usr/bin/dirname /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/sra/Makefile.in` test -f /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/sra/Makefile.in || /bin/cp -p /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/build-system/Makefile.in.skel /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/sra/Makefile.in /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/scripts/common/impl/update_configurable.sh /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT sra/Makefile config.status: creating /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/sra/Makefile /bin/mkdir -p `/usr/bin/dirname /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/gui/Makefile.in` test -f /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/gui/Makefile.in || /bin/cp -p /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/build-system/Makefile.in.skel /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/gui/Makefile.in /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/scripts/common/impl/update_configurable.sh /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT gui/Makefile config.status: creating /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/gui/Makefile /bin/mkdir -p `/usr/bin/dirname /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/sample/Makefile.in` test -f /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/sample/Makefile.in || /bin/cp -p /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/build-system/Makefile.in.skel /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/sample/Makefile.in /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/scripts/common/impl/update_configurable.sh /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT sample/Makefile config.status: creating /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/sample/Makefile /bin/mkdir -p `/usr/bin/dirname /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/internal/Makefile.in` test -f /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/internal/Makefile.in || /bin/cp -p /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/build-system/Makefile.in.skel /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/internal/Makefile.in /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/scripts/common/impl/update_configurable.sh /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT internal/Makefile config.status: creating /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/internal/Makefile /usr/local/bin/gmake -C corelib -w all_r || exit 5 gmake[3]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/corelib' gmake[4]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/corelib' /bin/mkdir -p `/usr/bin/dirname /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/test/Makefile.in` test -f /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/test/Makefile.in || /bin/cp -p /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/build-system/Makefile.in.skel /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/test/Makefile.in /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/scripts/common/impl/update_configurable.sh /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT test/Makefile config.status: creating /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/corelib/test/Makefile gmake[5]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/corelib' /usr/local/bin/gmake[5] (Makefile.precompile): Nothing to be done for `all'. gmake[5]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/corelib' /usr/local/bin/gmake -f /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/Makefile.lib.tmpl srcdir=/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib TMPL=corelib -w export-headers gmake[5]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/corelib' gmake[5]: Nothing to be done for 'export-headers'. gmake[5]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/corelib' /usr/local/bin/gmake -f /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/Makefile.lib.tmpl srcdir=/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib TMPL=test_mt -w export-headers gmake[5]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/corelib' gmake[5]: Nothing to be done for 'export-headers'. gmake[5]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/corelib' gmake[5]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/corelib' gmake[5]: *** No rule to make target '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/status/Boost.Test.Included.enabled', needed by 'requirements'. Stop. gmake[5]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/corelib' NOTE: skipping project "test_boost" due to unmet requirements gmake[5]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/corelib' gmake[5]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/corelib' /usr/local/bin/gmake -f /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/Makefile.lib.tmpl srcdir=/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib TMPL=corelib -w all /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_system.cpp:1554:36: error: invalid output constraint '=a' in asm asm volatile("cpuid" : "=a" (r[0]), "=b" (r[1]), "=c" (r[2]), "=d" (r[3]) : "a" (func_id)); ^ /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_system.cpp:1529:64: note: called by 'IS' static CCpuFeatures::InstructionSet* instruction_set = new CCpuFeatures::InstructionSet(); ^ /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include/corelib/ncbi_system.hpp:311:45: note: called by 'Vendor' static EVendor Vendor (void) { return IS().m_Vendor; } ^ /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_system.cpp:1561:36: error: invalid output constraint '=a' in asm asm volatile("cpuid" : "=a" (r[0]), "=b" (r[1]), "=c" (r[2]), "=d" (r[3]) : "a" (func_id), "c" (sub_id)); ^ /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_system.cpp:1554:36: error: invalid output constraint '=a' in asm asm volatile("cpuid" : "=a" (r[0]), "=b" (r[1]), "=c" (r[2]), "=d" (r[3]) : "a" (func_id)); ^ /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_system.cpp:1561:36: error: invalid output constraint '=a' in asm asm volatile("cpuid" : "=a" (r[0]), "=b" (r[1]), "=c" (r[2]), "=d" (r[3]) : "a" (func_id), "c" (sub_id)); ^ 4 errors generated. gmake[5]: *** [/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/Makefile.rules:88: ncbi_system.o] Error 1 gmake[5]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/corelib' Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_fast.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/request_status.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_message.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/guard.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_cookies.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_url.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbierror.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_toolkit.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/perf_log.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_autoinit.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/interprocess_lock.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/resource_info.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_strings.c. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/expr.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/request_control.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/request_ctx.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/version.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/syslog.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/stream_utils.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/rwstreambuf.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/plugin_manager_store.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/plugin_manager.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/obj_store.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbitime.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbithr.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbistre.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbistr.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbireg.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbiobj.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbimtx.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbimempool.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbifile.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbiexpt.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbiexec.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbienv.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbidll.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbidiag_p.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbidiag.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbidbg.cpp. Updating dependency information for ncbicfg.c. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbiatomic.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbiargs.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbiapp.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_system.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_stack.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_signal.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_safe_static.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_process.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_param.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_config.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/metareg.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/env_reg.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ddumpable.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/blob_storage.cpp. Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_os_unix.cpp. /nxb-bin/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -O2 -pipe -march=rv64imafdc -mabi=lp64d -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -isystem /usr/local/include -D_MT -D_REENTRANT -D_THREAD_SAFE -D__RUNETYPE_INTERNAL -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/inc -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include -DNCBI_BUILD_SESSION_ID=b0041197-d8fa-11eb-a5a5-a5a5a5a5a5a5 /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_os_unix.cpp -o ncbi_os_unix.o /nxb-bin/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -O2 -pipe -march=rv64imafdc -mabi=lp64d -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -isystem /usr/local/include -D_MT -D_REENTRANT -D_THREAD_SAFE -D__RUNETYPE_INTERNAL -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/inc -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include -DNCBI_BUILD_SESSION_ID=b0041197-d8fa-11eb-a5a5-a5a5a5a5a5a5 /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/blob_storage.cpp -o blob_storage.o /nxb-bin/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -O2 -pipe -march=rv64imafdc -mabi=lp64d -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -isystem /usr/local/include -D_MT -D_REENTRANT -D_THREAD_SAFE -D__RUNETYPE_INTERNAL -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/inc -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include -DNCBI_BUILD_SESSION_ID=b0041197-d8fa-11eb-a5a5-a5a5a5a5a5a5 /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ddumpable.cpp -o ddumpable.o /nxb-bin/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -O2 -pipe -march=rv64imafdc -mabi=lp64d -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -isystem /usr/local/include -D_MT -D_REENTRANT -D_THREAD_SAFE -D__RUNETYPE_INTERNAL -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/inc -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include -DNCBI_BUILD_SESSION_ID=b0041197-d8fa-11eb-a5a5-a5a5a5a5a5a5 /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/env_reg.cpp -o env_reg.o /nxb-bin/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -O2 -pipe -march=rv64imafdc -mabi=lp64d -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -isystem /usr/local/include -D_MT -D_REENTRANT -D_THREAD_SAFE -D__RUNETYPE_INTERNAL -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/inc -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include -DNCBI_BUILD_SESSION_ID=b0041197-d8fa-11eb-a5a5-a5a5a5a5a5a5 /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/metareg.cpp -o metareg.o /nxb-bin/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -O2 -pipe -march=rv64imafdc -mabi=lp64d -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -isystem /usr/local/include -D_MT -D_REENTRANT -D_THREAD_SAFE -D__RUNETYPE_INTERNAL -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/inc -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include -DNCBI_BUILD_SESSION_ID=b0041197-d8fa-11eb-a5a5-a5a5a5a5a5a5 /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_config.cpp -o ncbi_config.o /nxb-bin/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -O2 -pipe -march=rv64imafdc -mabi=lp64d -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -isystem /usr/local/include -D_MT -D_REENTRANT -D_THREAD_SAFE -D__RUNETYPE_INTERNAL -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/inc -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include -DNCBI_BUILD_SESSION_ID=b0041197-d8fa-11eb-a5a5-a5a5a5a5a5a5 /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_param.cpp -o ncbi_param.o /nxb-bin/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -O2 -pipe -march=rv64imafdc -mabi=lp64d -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -isystem /usr/local/include -D_MT -D_REENTRANT -D_THREAD_SAFE -D__RUNETYPE_INTERNAL -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/inc -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include -DNCBI_BUILD_SESSION_ID=b0041197-d8fa-11eb-a5a5-a5a5a5a5a5a5 /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_process.cpp -o ncbi_process.o /nxb-bin/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -O2 -pipe -march=rv64imafdc -mabi=lp64d -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -isystem /usr/local/include -D_MT -D_REENTRANT -D_THREAD_SAFE -D__RUNETYPE_INTERNAL -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/inc -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include -DNCBI_BUILD_SESSION_ID=b0041197-d8fa-11eb-a5a5-a5a5a5a5a5a5 /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_safe_static.cpp -o ncbi_safe_static.o /nxb-bin/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -O2 -pipe -march=rv64imafdc -mabi=lp64d -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -isystem /usr/local/include -D_MT -D_REENTRANT -D_THREAD_SAFE -D__RUNETYPE_INTERNAL -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/inc -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include -DNCBI_BUILD_SESSION_ID=b0041197-d8fa-11eb-a5a5-a5a5a5a5a5a5 /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_signal.cpp -o ncbi_signal.o /nxb-bin/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -O2 -pipe -march=rv64imafdc -mabi=lp64d -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -isystem /usr/local/include -D_MT -D_REENTRANT -D_THREAD_SAFE -D__RUNETYPE_INTERNAL -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/inc -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include -DNCBI_BUILD_SESSION_ID=b0041197-d8fa-11eb-a5a5-a5a5a5a5a5a5 /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_stack.cpp -o ncbi_stack.o /nxb-bin/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -O2 -pipe -march=rv64imafdc -mabi=lp64d -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -isystem /usr/local/include -D_MT -D_REENTRANT -D_THREAD_SAFE -D__RUNETYPE_INTERNAL -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/inc -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include -DNCBI_BUILD_SESSION_ID=b0041197-d8fa-11eb-a5a5-a5a5a5a5a5a5 /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_system.cpp -o ncbi_system.o gmake[5]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/corelib' FAILED: src/corelib/Makefile.corelib.lib gmake[5]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/corelib' /bin/rm -f libxncbi.a .xncbi.dep .libxncbi.a.stamp /bin/rm -f /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/lib/libxncbi.a /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/status/.xncbi.dep \ /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/lib/libxncbi-static.a /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/status/.xncbi-static.dep gmake[5]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/corelib' gmake[4]: *** [/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/build-system/Makefile.meta_l:323: all.nonusr] Error 2 gmake[4]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/corelib' gmake[3]: *** [/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/build-system/Makefile.meta_l:281: all_l.real] Error 2 gmake[3]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/corelib' gmake[2]: *** [/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/build-system/Makefile.meta_r:41: all_r.real] Error 5 gmake[2]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build' gmake[1]: *** [Makefile:24: all] Error 2 gmake[1]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++' *** Error code 1 Stop. make: stopped in /usr/ports/biology/ncbi-blast+
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