From owner-freebsd-ports-bugs@FreeBSD.ORG Tue Nov 2 02:20:07 2010 Return-Path: Delivered-To: freebsd-ports-bugs@hub.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:4f8:fff6::34]) by hub.freebsd.org (Postfix) with ESMTP id 471E51065694 for ; Tue, 2 Nov 2010 02:20:07 +0000 (UTC) (envelope-from gnats@FreeBSD.org) Received: from freefall.freebsd.org (freefall.freebsd.org [IPv6:2001:4f8:fff6::28]) by mx1.freebsd.org (Postfix) with ESMTP id F35678FC13 for ; Tue, 2 Nov 2010 02:20:06 +0000 (UTC) Received: from freefall.freebsd.org (localhost [127.0.0.1]) by freefall.freebsd.org (8.14.4/8.14.4) with ESMTP id oA22K6uO067368 for ; Tue, 2 Nov 2010 02:20:06 GMT (envelope-from gnats@freefall.freebsd.org) Received: (from gnats@localhost) by freefall.freebsd.org (8.14.4/8.14.4/Submit) id oA22K6dG067367; Tue, 2 Nov 2010 02:20:06 GMT (envelope-from gnats) Resent-Date: Tue, 2 Nov 2010 02:20:06 GMT Resent-Message-Id: <201011020220.oA22K6dG067367@freefall.freebsd.org> Resent-From: FreeBSD-gnats-submit@FreeBSD.org (GNATS Filer) Resent-To: freebsd-ports-bugs@FreeBSD.org Resent-Reply-To: FreeBSD-gnats-submit@FreeBSD.org, Rob Farmer Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:4f8:fff6::34]) by hub.freebsd.org (Postfix) with ESMTP id 0E48D1065670 for ; Tue, 2 Nov 2010 02:10:32 +0000 (UTC) (envelope-from nobody@FreeBSD.org) Received: from www.freebsd.org (www.freebsd.org [IPv6:2001:4f8:fff6::21]) by mx1.freebsd.org (Postfix) with ESMTP id EFA7C8FC15 for ; Tue, 2 Nov 2010 02:10:31 +0000 (UTC) Received: from www.freebsd.org (localhost [127.0.0.1]) by www.freebsd.org (8.14.3/8.14.3) with ESMTP id oA22AV7T070617 for ; Tue, 2 Nov 2010 02:10:31 GMT (envelope-from nobody@www.freebsd.org) Received: (from nobody@localhost) by www.freebsd.org (8.14.3/8.14.3/Submit) id oA22AVVw070604; Tue, 2 Nov 2010 02:10:31 GMT (envelope-from nobody) Message-Id: <201011020210.oA22AVVw070604@www.freebsd.org> Date: Tue, 2 Nov 2010 02:10:31 GMT From: Rob Farmer To: freebsd-gnats-submit@FreeBSD.org X-Send-Pr-Version: www-3.1 Cc: Subject: ports/151883: [maintainer] [patch] science/hdf-java Fix build when HDF uses SZIP option + a couple minor fixes X-BeenThere: freebsd-ports-bugs@freebsd.org X-Mailman-Version: 2.1.5 Precedence: list List-Id: Ports bug reports List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 02 Nov 2010 02:20:07 -0000 >Number: 151883 >Category: ports >Synopsis: [maintainer] [patch] science/hdf-java Fix build when HDF uses SZIP option + a couple minor fixes >Confidential: no >Severity: non-critical >Priority: low >Responsible: freebsd-ports-bugs >State: open >Quarter: >Keywords: >Date-Required: >Class: maintainer-update >Submitter-Id: current-users >Arrival-Date: Tue Nov 02 02:20:06 UTC 2010 >Closed-Date: >Last-Modified: >Originator: Rob Farmer >Release: 9.0-CURRENT >Organization: >Environment: FreeBSD turquoise.predatorlabs.net 9.0-CURRENT FreeBSD 9.0-CURRENT #0 r214587: Sun Oct 31 02:05:36 PDT 2010 rfarmer@turquoise.predatorlabs.net:/usr/obj/usr/src/sys/TURQUOISE amd64 >Description: -Fix configure when HDF was built with SZIP support [1] -Add USE_LDCONFIG [2] -Fix configure to allow build by non-root user (it tests if /usr/local is writable) -Remove MD5 from distinfo Reported by: Wasp [1], portlint [2] Tested by: Wasp >How-To-Repeat: >Fix: Patch attached with submission follows: Index: Makefile =================================================================== RCS file: /home/ncvs/ports/science/hdf-java/Makefile,v retrieving revision 1.2 diff -u -r1.2 Makefile --- Makefile 10 Jun 2010 11:43:09 -0000 1.2 +++ Makefile 1 Nov 2010 10:50:26 -0000 @@ -7,6 +7,7 @@ PORTNAME= hdf-java PORTVERSION= 2.6.1 +PORTREVISION= 1 CATEGORIES= science java MASTER_SITES= http://www.hdfgroup.org/ftp/HDF5/hdf-java/src/ \ http://www.predatorlabs.net/dl/ @@ -17,6 +18,7 @@ LIB_DEPENDS= hdf5.6:${PORTSDIR}/science/hdf5-18 +USE_LDCONFIG= yes USE_JAVA= yes JAVA_VERSION= 1.5+ JAVA_BUILD= yes @@ -29,9 +31,18 @@ WRKSRC= ${WRKDIR}/${PORTNAME} +OPTIONS= SZIP "SZIP support (must match with science/hdf5-18)" off + +.include + +.if defined(WITH_SZIP) +CONFIGURE_ARGS+= --with-libsz=${LOCALBASE}/lib +.endif + post-patch: ${REINPLACE_CMD} -e 's|"/libhdf.$$LLEXT"|"${LOCALBASE}/lib"|' ${WRKSRC}/configure ${REINPLACE_CMD} -e 's|$$z_lib"/libz."$$LLEXT|"/lib/libz.so.*"|' ${WRKSRC}/configure + ${REINPLACE_CMD} -e 's|$$sz_lib"/libsz."$$LLEXT|"${LOCALBASE}/lib/libsz.so.*"|' ${WRKSRC}/configure ${REINPLACE_CMD} -e 's|LLEXT="a"|LLEXT="so"|g' ${WRKSRC}/configure ${REINPLACE_CMD} -e 's|COPT="-shared"|COPT="-fPIC"|g' ${WRKSRC}/configure ${REINPLACE_CMD} -e 's|$$(JH45INSTALLDIR)/lib|${JAVAJARDIR}|' ${WRKSRC}/Makefile.in Index: distinfo =================================================================== RCS file: /home/ncvs/ports/science/hdf-java/distinfo,v retrieving revision 1.2 diff -u -r1.2 distinfo --- distinfo 10 Jun 2010 11:43:09 -0000 1.2 +++ distinfo 1 Nov 2010 10:47:23 -0000 @@ -1,3 +1,2 @@ -MD5 (hdf-java-2.6.1-src.tar) = c3cd791560291c659b493d97e63a9e8e SHA256 (hdf-java-2.6.1-src.tar) = 14abf95abe9a863b03d396e87da463da4746e54f05f5c63aef583461ef1401ea SIZE (hdf-java-2.6.1-src.tar) = 10393600 Index: files/patch-configure =================================================================== RCS file: files/patch-configure diff -N files/patch-configure --- /dev/null 1 Jan 1970 00:00:00 -0000 +++ files/patch-configure 1 Nov 2010 10:47:23 -0000 @@ -0,0 +1,28 @@ +--- configure.orig 2010-11-01 02:54:27.000000000 -0700 ++++ configure 2010-11-01 02:56:20.000000000 -0700 +@@ -4424,12 +4424,6 @@ + if test \( ! -d "$JH45INST" \); then + JH45INST_FOUND=0 + fi +- if test \( ! -w "$JH45INST" \); then +- { { echo "$as_me:$LINENO: error: $JAVINST : not writable " >&5 +-echo "$as_me: error: $JAVINST : not writable " >&2;} +- { (exit 1); exit 1; }; } +- JH45INST_FOUND=0 +- fi + fi + until test $JH45INST_FOUND -eq 1; do + echo "Please type the directory in which to install the JH45" +@@ -4438,12 +4432,6 @@ + if test \( ! -d "$JH45INST" \); then + JH45INST_FOUND=0 + fi +- if test \( ! -w "$JH45INST" \); then +- { { echo "$as_me:$LINENO: error: $JAVINST : not writable " >&5 +-echo "$as_me: error: $JAVINST : not writable " >&2;} +- { (exit 1); exit 1; }; } +- JH45INST_FOUND=0 +- fi + done + + ac_cv_lib_JH45INST=$JH45INST >Release-Note: >Audit-Trail: >Unformatted: