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ESMTPS id 4QzfM51dmwzH57; Sun, 9 Jul 2023 20:46:57 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from gitrepo.freebsd.org ([127.0.1.44]) by gitrepo.freebsd.org (8.17.1/8.17.1) with ESMTP id 369Kkvmu083670; Sun, 9 Jul 2023 20:46:57 GMT (envelope-from git@gitrepo.freebsd.org) Received: (from git@localhost) by gitrepo.freebsd.org (8.17.1/8.17.1/Submit) id 369KkvL7083669; Sun, 9 Jul 2023 20:46:57 GMT (envelope-from git) Date: Sun, 9 Jul 2023 20:46:57 GMT Message-Id: <202307092046.369KkvL7083669@gitrepo.freebsd.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org From: Yuri Victorovich Subject: git: bb74b4393e00 - main - =?utf-8?Q?math/deal.ii:=20Update=209.4.2=20=E2=86=92=209.5.0?= List-Id: Commit messages for all branches of the ports repository List-Archive: https://lists.freebsd.org/archives/dev-commits-ports-all List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-dev-commits-ports-all@freebsd.org X-BeenThere: dev-commits-ports-all@freebsd.org MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 8bit X-Git-Committer: yuri X-Git-Repository: ports X-Git-Refname: refs/heads/main X-Git-Reftype: branch X-Git-Commit: bb74b4393e00e27b233384d2f7214ec702d5aea0 Auto-Submitted: auto-generated X-ThisMailContainsUnwantedMimeParts: N The branch main has been updated by yuri: URL: https://cgit.FreeBSD.org/ports/commit/?id=bb74b4393e00e27b233384d2f7214ec702d5aea0 commit bb74b4393e00e27b233384d2f7214ec702d5aea0 Author: Yuri Victorovich AuthorDate: 2023-07-09 20:46:37 +0000 Commit: Yuri Victorovich CommitDate: 2023-07-09 20:46:37 +0000 math/deal.ii: Update 9.4.2 → 9.5.0 Reported by: portscout --- math/deal.ii/Makefile | 39 +-- math/deal.ii/distinfo | 6 +- math/deal.ii/files/patch-CMakeLists.txt | 14 +- math/deal.ii/files/patch-doc_CMakeLists.txt | 8 +- math/deal.ii/pkg-plist | 492 +++++++++++++++++++++++++++- 5 files changed, 519 insertions(+), 40 deletions(-) diff --git a/math/deal.ii/Makefile b/math/deal.ii/Makefile index 46f945b97222..312831ae38e4 100644 --- a/math/deal.ii/Makefile +++ b/math/deal.ii/Makefile @@ -1,8 +1,8 @@ PORTNAME= deal.II -DISTVERSIONPREFIX= v -DISTVERSION= 9.4.2 -PORTREVISION= 1 +DISTVERSION= 9.5.0 CATEGORIES= math +MASTER_SITES= https://github.com/dealii/dealii/releases/download/v${DISTVERSION}/ +DISTNAME= dealii-${DISTVERSION} MAINTAINER= yuri@FreeBSD.org COMMENT= Finite element Differential Equations Analysis Library (DEAL) @@ -19,23 +19,25 @@ BUILD_DEPENDS= ${LOCALBASE}/include/boost/config.hpp:devel/boost-libs LIB_DEPENDS= libboost_serialization.so:devel/boost-libs \ libhdf5.so:science/hdf5 \ libmetis.so:math/metis +# libkokkoscore.so:devel/kokkos TMP commented out for bundled kokkos, tests fail for non-bundled kokkos, see https://github.com/dealii/dealii/issues/15692 -USES= blaslapack cmake:testing compiler:c++17-lang localbase:ldflags +USES= blaslapack cmake:testing compiler:c++17-lang localbase:ldflags xorg +USE_XORG= x11 # is this legit? see https://github.com/dealii/dealii/issues/15693 USE_LDCONFIG= yes -USE_GITHUB= yes -GH_ACCOUNT= ${PORTNAME:tl:S/.//} -GH_PROJECT= ${PORTNAME:tl:S/.//} - CMAKE_OFF= DEAL_II_ALLOW_BUNDLED DEAL_II_COMPONENT_EXAMPLES \ DEAL_II_WITH_P4EST DEAL_II_WITH_TRILINOS DEAL_II_WITH_UMFPACK \ DEAL_II_WITH_NANOFLANN DEAL_II_WITH_MUPARSER DEAL_II_WITH_ASSIMP \ DEAL_II_WITH_HDF5 CMAKE_ON= DEAL_II_FORCE_BUNDLED_TBB # instead of LIB_DEPENDS+=libtbb.so:devel/onetbb, pending https://github.com/dealii/dealii/issues/11561 -CMAKE_TESTING_ON= FREEBSD_ENABLE_TESTS +CMAKE_ON+= FORCE_BUNDLED_KOKKOS # TMP turn on bundled kokkos +CMAKE_TESTING_ON= FREEBSD_ENABLE_TESTS # several tests fail, see https://github.com/dealii/dealii/issues/15692 + +LDFLAGS+= -lomp +LDFLAGS+= -lexecinfo # TMP for bundled kokkos -OPTIONS_DEFINE= ADOLC ARPACK GSL LAPACK MPI NETCDF OPENCASCADE PETSC SCALAPACK SUNDIALS -OPTIONS_DEFAULT= GSL LAPACK # SUNDIALS +OPTIONS_DEFINE= ADOLC ARPACK GSL LAPACK MPI OPENCASCADE PETSC SCALAPACK SLEPC SUNDIALS # for all options see contrib/docker/Dockerfile, TODO some of them need to be enabled here +OPTIONS_DEFAULT= GSL LAPACK MPI OPENCASCADE PETSC SCALAPACK SLEPC SUNDIALS ADOLC_DESC= Compile with ADOL-C ADOLC_CMAKE_BOOL= DEAL_II_WITH_ADOLC @@ -66,30 +68,29 @@ MPI_CMAKE_ON= -DMPI_LINKER_FLAGS:STRING="${LDFLAGS}" MPI_LIB_DEPENDS= libboost_iostreams.so:devel/boost-libs \ libmpich.so:net/mpich -NETCDF_DESC= Compile with Netcdf (only with MPI) -NETCDF_CMAKE_BOOL= DEAL_II_WITH_NETCDF -NETCDF_CMAKE_ON= -DNETCDF_INCLUDE_DIR:STRING=${LOCALBASE}/include -DNETCDF_CPLUSPLUS_LIBRARY:STRING=${LOCALBASE}/lib/libnetcdf_c++4.so -NETCDF_BROKEN= see https://github.com/dealii/dealii/issues/7263 - OPENCASCADE_DESC= Compile with OpenCascade OPENCASCADE_CMAKE_BOOL= DEAL_II_WITH_OPENCASCADE OPENCASCADE_CMAKE_ON= -DOPENCASCADE_INCLUDE_DIR:STRING=${LOCALBASE}/include/OpenCASCADE OPENCASCADE_LIB_DEPENDS= libTKernel.so:cad/opencascade PETSC_DESC= Compile with Petsc (only with MPI) -PETSC_CMAKE_BOOL= DEAL_II_WITH_PETSC +PETSC_CMAKE_BOOL= DEAL_II_WITH_PETSC DEAL_II_WITH_64BIT_INDICES PETSC_LIB_DEPENDS= libpetsc.so:science/PETSc -PETSC_BROKEN= see https://github.com/dealii/dealii/issues/7260 +PETSC_IMPLIES= MPI # has to use the same MPI as PETSc uses SCALAPACK_DESC= Compile with ScaLAPACK (only with MPI) SCALAPACK_CMAKE_BOOL= DEAL_II_WITH_SCALAPACK SCALAPACK_IMPLIES= MPI LAPACK SCALAPACK_LIB_DEPENDS= libscalapack.so:math/scalapack +SLEPC_DESC= Compile with Slepc (only with MPI) +SLEPC_CMAKE_BOOL= DEAL_II_WITH_SLEPC +SLEPC_LIB_DEPENDS= libslepc.so:math/slepc +SLEPC_IMPLIES= MPI # has to use the same MPI as PETSc uses + SUNDIALS_DESC= Compile with SUNDIALS SUNDIALS_CMAKE_BOOL= DEAL_II_WITH_SUNDIALS SUNDIALS_LIB_DEPENDS= libsundials_arkode.so:math/sundials -SUNDIALS_BROKEN= Build fails with: Required variable "SUNDIALS_LIB_PAR" set to NOTFOUND post-patch: # unbundle boost @${RM} -r ${WRKSRC}/dealii/bundled/boost-* diff --git a/math/deal.ii/distinfo b/math/deal.ii/distinfo index 6c7c04f61f24..a04a5d3b9a9c 100644 --- a/math/deal.ii/distinfo +++ b/math/deal.ii/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1675788175 -SHA256 (dealii-dealii-v9.4.2_GH0.tar.gz) = 45a76cb400bfcff25cc2d9093d9a5c91545c8367985e6798811c5e9d2a6a6fd4 -SIZE (dealii-dealii-v9.4.2_GH0.tar.gz) = 30298479 +TIMESTAMP = 1688878324 +SHA256 (dealii-9.5.0.tar.gz) = a81f41565f0d3a22d491ee687957dd48053225da72e8d6d628d210358f4a0464 +SIZE (dealii-9.5.0.tar.gz) = 31524412 diff --git a/math/deal.ii/files/patch-CMakeLists.txt b/math/deal.ii/files/patch-CMakeLists.txt index 7d144b68c0bb..04b5bbc2ab8f 100644 --- a/math/deal.ii/files/patch-CMakeLists.txt +++ b/math/deal.ii/files/patch-CMakeLists.txt @@ -1,11 +1,11 @@ ---- CMakeLists.txt.orig 2021-11-18 21:53:45 UTC +--- CMakeLists.txt.orig 2023-07-08 00:20:16 UTC +++ CMakeLists.txt -@@ -77,7 +77,7 @@ IF(EXISTS ${CMAKE_SOURCE_DIR}/doc/CMakeLists.txt) - ENDIF() +@@ -76,7 +76,7 @@ if(EXISTS ${CMAKE_SOURCE_DIR}/doc/CMakeLists.txt) + endif() - IF(EXISTS ${CMAKE_SOURCE_DIR}/tests/CMakeLists.txt) -- SET(DEAL_II_HAVE_TESTS_DIRECTORY TRUE) -+ SET(DEAL_II_HAVE_TESTS_DIRECTORY ${FREEBSD_ENABLE_TESTS}) - ENDIF() + if(EXISTS ${CMAKE_SOURCE_DIR}/tests/CMakeLists.txt) +- set(DEAL_II_HAVE_TESTS_DIRECTORY TRUE) ++ set(DEAL_II_HAVE_TESTS_DIRECTORY ${FREEBSD_ENABLE_TESTS}) + endif() # diff --git a/math/deal.ii/files/patch-doc_CMakeLists.txt b/math/deal.ii/files/patch-doc_CMakeLists.txt index 18304974c967..c21be401932e 100644 --- a/math/deal.ii/files/patch-doc_CMakeLists.txt +++ b/math/deal.ii/files/patch-doc_CMakeLists.txt @@ -1,16 +1,16 @@ ---- doc/CMakeLists.txt.orig 2019-05-25 02:19:55 UTC +--- doc/CMakeLists.txt.orig 2023-07-08 00:20:16 UTC +++ doc/CMakeLists.txt -@@ -44,12 +44,12 @@ ENDIF(DEAL_II_COMPONENT_DOCUMENTATION) +@@ -44,12 +44,12 @@ endif() # Always install a minimalistic README and LICENSE file: # --INSTALL(FILES +-install(FILES - ${CMAKE_SOURCE_DIR}/README.md - ${CMAKE_SOURCE_DIR}/LICENSE.md - DESTINATION ${DEAL_II_DOCREADME_RELDIR} - COMPONENT library - ) -+#INSTALL(FILES ++#install(FILES +# ${CMAKE_SOURCE_DIR}/README.md +# ${CMAKE_SOURCE_DIR}/LICENSE.md +# DESTINATION ${DEAL_II_DOCREADME_RELDIR} diff --git a/math/deal.ii/pkg-plist b/math/deal.ii/pkg-plist index 23d32f0093b8..16fb33919575 100644 --- a/math/deal.ii/pkg-plist +++ b/math/deal.ii/pkg-plist @@ -28,6 +28,7 @@ include/deal.II/base/derivative_form.h include/deal.II/base/discrete_time.h include/deal.II/base/event.h include/deal.II/base/exceptions.h +include/deal.II/base/floating_point_comparator.h include/deal.II/base/flow_function.h include/deal.II/base/function.h include/deal.II/base/function.templates.h @@ -51,6 +52,7 @@ include/deal.II/base/incremental_function.h include/deal.II/base/index_set.h include/deal.II/base/iterator_range.h include/deal.II/base/job_identifier.h +include/deal.II/base/kokkos.h include/deal.II/base/linear_index_iterator.h include/deal.II/base/logstream.h include/deal.II/base/memory_consumption.h @@ -66,10 +68,12 @@ include/deal.II/base/mpi_large_count.h include/deal.II/base/mpi_noncontiguous_partitioner.h include/deal.II/base/mpi_noncontiguous_partitioner.templates.h include/deal.II/base/mpi_remote_point_evaluation.h +include/deal.II/base/mpi_stub.h include/deal.II/base/mpi_tags.h include/deal.II/base/mu_parser_internal.h include/deal.II/base/multithread_info.h include/deal.II/base/mutable_bind.h +include/deal.II/base/mutex.h include/deal.II/base/ndarray.h include/deal.II/base/numbers.h include/deal.II/base/parallel.h @@ -90,6 +94,7 @@ include/deal.II/base/polynomials_barycentric.h include/deal.II/base/polynomials_bdm.h include/deal.II/base/polynomials_bernardi_raugel.h include/deal.II/base/polynomials_bernstein.h +include/deal.II/base/polynomials_hermite.h include/deal.II/base/polynomials_integrated_legendre_sz.h include/deal.II/base/polynomials_nedelec.h include/deal.II/base/polynomials_p.h @@ -108,16 +113,19 @@ include/deal.II/base/quadrature_selector.h include/deal.II/base/revision.h include/deal.II/base/sacado_product_type.h include/deal.II/base/scalar_polynomials_base.h +include/deal.II/base/scope_exit.h include/deal.II/base/signaling_nan.h include/deal.II/base/smartpointer.h include/deal.II/base/std_cxx14/algorithm.h include/deal.II/base/std_cxx14/memory.h include/deal.II/base/std_cxx14/utility.h +include/deal.II/base/std_cxx17/algorithm.h include/deal.II/base/std_cxx17/cmath.h include/deal.II/base/std_cxx17/optional.h include/deal.II/base/std_cxx17/tuple.h include/deal.II/base/std_cxx17/variant.h include/deal.II/base/std_cxx20/iota_view.h +include/deal.II/base/std_cxx20/type_traits.h include/deal.II/base/subscriptor.h include/deal.II/base/symbolic_function.h include/deal.II/base/symbolic_function.templates.h @@ -142,6 +150,7 @@ include/deal.II/base/thread_management.h include/deal.II/base/time_stepping.h include/deal.II/base/time_stepping.templates.h include/deal.II/base/timer.h +include/deal.II/base/trilinos_utilities.h include/deal.II/base/types.h include/deal.II/base/undefine_macros.h include/deal.II/base/utilities.h @@ -151,6 +160,448 @@ include/deal.II/base/work_stream.h include/deal.II/boost_adaptors/bounding_box.h include/deal.II/boost_adaptors/point.h include/deal.II/boost_adaptors/segment.h +include/deal.II/bundled/Cuda/Kokkos_Cuda_Alloc.hpp +include/deal.II/bundled/Cuda/Kokkos_Cuda_Atomic_Intrinsics.hpp +include/deal.II/bundled/Cuda/Kokkos_Cuda_Atomic_Intrinsics_Restore_Builtins.hpp +include/deal.II/bundled/Cuda/Kokkos_Cuda_BlockSize_Deduction.hpp +include/deal.II/bundled/Cuda/Kokkos_Cuda_Error.hpp +include/deal.II/bundled/Cuda/Kokkos_Cuda_GraphNodeKernel.hpp +include/deal.II/bundled/Cuda/Kokkos_Cuda_GraphNode_Impl.hpp +include/deal.II/bundled/Cuda/Kokkos_Cuda_Graph_Impl.hpp +include/deal.II/bundled/Cuda/Kokkos_Cuda_Half_Conversion.hpp +include/deal.II/bundled/Cuda/Kokkos_Cuda_Half_Impl_Type.hpp +include/deal.II/bundled/Cuda/Kokkos_Cuda_Instance.hpp +include/deal.II/bundled/Cuda/Kokkos_Cuda_KernelLaunch.hpp +include/deal.II/bundled/Cuda/Kokkos_Cuda_Locks.hpp +include/deal.II/bundled/Cuda/Kokkos_Cuda_MDRangePolicy.hpp +include/deal.II/bundled/Cuda/Kokkos_Cuda_Parallel_MDRange.hpp +include/deal.II/bundled/Cuda/Kokkos_Cuda_Parallel_Range.hpp +include/deal.II/bundled/Cuda/Kokkos_Cuda_Parallel_Team.hpp +include/deal.II/bundled/Cuda/Kokkos_Cuda_ReduceScan.hpp +include/deal.II/bundled/Cuda/Kokkos_Cuda_Task.hpp +include/deal.II/bundled/Cuda/Kokkos_Cuda_Team.hpp +include/deal.II/bundled/Cuda/Kokkos_Cuda_UniqueToken.hpp +include/deal.II/bundled/Cuda/Kokkos_Cuda_Vectorization.hpp +include/deal.II/bundled/Cuda/Kokkos_Cuda_View.hpp +include/deal.II/bundled/Cuda/Kokkos_Cuda_WorkGraphPolicy.hpp +include/deal.II/bundled/Cuda/Kokkos_Cuda_abort.hpp +include/deal.II/bundled/HIP/Kokkos_HIP_Abort.hpp +include/deal.II/bundled/HIP/Kokkos_HIP_Atomic.hpp +include/deal.II/bundled/HIP/Kokkos_HIP_BlockSize_Deduction.hpp +include/deal.II/bundled/HIP/Kokkos_HIP_Error.hpp +include/deal.II/bundled/HIP/Kokkos_HIP_Half_Conversion.hpp +include/deal.II/bundled/HIP/Kokkos_HIP_Half_Impl_Type.hpp +include/deal.II/bundled/HIP/Kokkos_HIP_Instance.hpp +include/deal.II/bundled/HIP/Kokkos_HIP_KernelLaunch.hpp +include/deal.II/bundled/HIP/Kokkos_HIP_Locks.hpp +include/deal.II/bundled/HIP/Kokkos_HIP_MDRangePolicy.hpp +include/deal.II/bundled/HIP/Kokkos_HIP_Parallel_MDRange.hpp +include/deal.II/bundled/HIP/Kokkos_HIP_Parallel_Range.hpp +include/deal.II/bundled/HIP/Kokkos_HIP_Parallel_Team.hpp +include/deal.II/bundled/HIP/Kokkos_HIP_ReduceScan.hpp +include/deal.II/bundled/HIP/Kokkos_HIP_Shuffle_Reduce.hpp +include/deal.II/bundled/HIP/Kokkos_HIP_Team.hpp +include/deal.II/bundled/HIP/Kokkos_HIP_UniqueToken.hpp +include/deal.II/bundled/HIP/Kokkos_HIP_Vectorization.hpp +include/deal.II/bundled/HIP/Kokkos_HIP_WorkGraphPolicy.hpp +include/deal.II/bundled/HPX/Kokkos_HPX_Task.hpp +include/deal.II/bundled/HPX/Kokkos_HPX_WorkGraphPolicy.hpp +include/deal.II/bundled/KokkosCore_Config_DeclareBackend.hpp +include/deal.II/bundled/KokkosCore_Config_FwdBackend.hpp +include/deal.II/bundled/KokkosCore_Config_PostInclude.hpp +include/deal.II/bundled/KokkosCore_Config_SetupBackend.hpp +include/deal.II/bundled/KokkosCore_config.h +include/deal.II/bundled/KokkosExp_InterOp.hpp +include/deal.II/bundled/KokkosExp_MDRangePolicy.hpp +include/deal.II/bundled/Kokkos_AcquireUniqueTokenImpl.hpp +include/deal.II/bundled/Kokkos_AnonymousSpace.hpp +include/deal.II/bundled/Kokkos_Array.hpp +include/deal.II/bundled/Kokkos_Atomic.hpp +include/deal.II/bundled/Kokkos_Atomics_Desul_Config.hpp +include/deal.II/bundled/Kokkos_Atomics_Desul_Volatile_Wrapper.hpp +include/deal.II/bundled/Kokkos_Atomics_Desul_Wrapper.hpp +include/deal.II/bundled/Kokkos_Bitset.hpp +include/deal.II/bundled/Kokkos_Complex.hpp +include/deal.II/bundled/Kokkos_Concepts.hpp +include/deal.II/bundled/Kokkos_CopyViews.hpp +include/deal.II/bundled/Kokkos_Core.hpp +include/deal.II/bundled/Kokkos_Core_fwd.hpp +include/deal.II/bundled/Kokkos_Crs.hpp +include/deal.II/bundled/Kokkos_Cuda.hpp +include/deal.II/bundled/Kokkos_CudaSpace.hpp +include/deal.II/bundled/Kokkos_DetectionIdiom.hpp +include/deal.II/bundled/Kokkos_DualView.hpp +include/deal.II/bundled/Kokkos_DynRankView.hpp +include/deal.II/bundled/Kokkos_DynamicView.hpp +include/deal.II/bundled/Kokkos_ErrorReporter.hpp +include/deal.II/bundled/Kokkos_ExecPolicy.hpp +include/deal.II/bundled/Kokkos_Extents.hpp +include/deal.II/bundled/Kokkos_Functional.hpp +include/deal.II/bundled/Kokkos_Future.hpp +include/deal.II/bundled/Kokkos_Graph.hpp +include/deal.II/bundled/Kokkos_GraphNode.hpp +include/deal.II/bundled/Kokkos_Graph_fwd.hpp +include/deal.II/bundled/Kokkos_HBWSpace.hpp +include/deal.II/bundled/Kokkos_HIP.hpp +include/deal.II/bundled/Kokkos_HIP_Space.hpp +include/deal.II/bundled/Kokkos_HPX.hpp +include/deal.II/bundled/Kokkos_Half.hpp 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+include/deal.II/bundled/std_algorithms/Kokkos_PartitionPoint.hpp +include/deal.II/bundled/std_algorithms/Kokkos_Reduce.hpp +include/deal.II/bundled/std_algorithms/Kokkos_Remove.hpp +include/deal.II/bundled/std_algorithms/Kokkos_RemoveCopy.hpp +include/deal.II/bundled/std_algorithms/Kokkos_RemoveCopyIf.hpp +include/deal.II/bundled/std_algorithms/Kokkos_RemoveIf.hpp +include/deal.II/bundled/std_algorithms/Kokkos_Replace.hpp +include/deal.II/bundled/std_algorithms/Kokkos_ReplaceCopy.hpp +include/deal.II/bundled/std_algorithms/Kokkos_ReplaceCopyIf.hpp +include/deal.II/bundled/std_algorithms/Kokkos_ReplaceIf.hpp +include/deal.II/bundled/std_algorithms/Kokkos_Reverse.hpp +include/deal.II/bundled/std_algorithms/Kokkos_ReverseCopy.hpp +include/deal.II/bundled/std_algorithms/Kokkos_Rotate.hpp +include/deal.II/bundled/std_algorithms/Kokkos_RotateCopy.hpp +include/deal.II/bundled/std_algorithms/Kokkos_Search.hpp +include/deal.II/bundled/std_algorithms/Kokkos_SearchN.hpp +include/deal.II/bundled/std_algorithms/Kokkos_ShiftLeft.hpp +include/deal.II/bundled/std_algorithms/Kokkos_ShiftRight.hpp +include/deal.II/bundled/std_algorithms/Kokkos_Swap.hpp +include/deal.II/bundled/std_algorithms/Kokkos_SwapRanges.hpp +include/deal.II/bundled/std_algorithms/Kokkos_Transform.hpp +include/deal.II/bundled/std_algorithms/Kokkos_TransformExclusiveScan.hpp +include/deal.II/bundled/std_algorithms/Kokkos_TransformInclusiveScan.hpp +include/deal.II/bundled/std_algorithms/Kokkos_TransformReduce.hpp +include/deal.II/bundled/std_algorithms/Kokkos_Unique.hpp +include/deal.II/bundled/std_algorithms/Kokkos_UniqueCopy.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_AdjacentDifference.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_AdjacentFind.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_AllOfAnyOfNoneOf.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_Constraints.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_CopyBackward.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_CopyCopyN.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_CopyIf.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_CountCountIf.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_Equal.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_ExclusiveScan.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_FillFillN.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_FindEnd.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_FindFirstOf.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_FindIfOrNot.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_ForEachForEachN.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_GenerateGenerateN.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_HelperPredicates.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_IdentityReferenceUnaryFunctor.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_InclusiveScan.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_IsPartitioned.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_IsSorted.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_IsSortedUntil.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_LexicographicalCompare.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_MinMaxMinmaxElement.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_Mismatch.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_Move.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_MoveBackward.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_PartitionCopy.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_PartitionPoint.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_RandomAccessIterator.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_Reduce.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_ReducerWithArbitraryJoinerNoNeutralElement.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_RemoveAllVariants.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_Replace.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_ReplaceCopy.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_ReplaceCopyIf.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_ReplaceIf.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_Reverse.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_ReverseCopy.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_Rotate.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_RotateCopy.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_Search.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_SearchN.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_ShiftLeft.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_ShiftRight.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_SwapRanges.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_Transform.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_TransformExclusiveScan.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_TransformInclusiveScan.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_TransformReduce.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_Unique.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_UniqueCopy.hpp +include/deal.II/bundled/std_algorithms/impl/Kokkos_ValueWrapperForNoNeutralElement.hpp include/deal.II/bundled/tbb/aggregator.h include/deal.II/bundled/tbb/aligned_space.h include/deal.II/bundled/tbb/atomic.h @@ -255,7 +706,20 @@ include/deal.II/bundled/tbb/tbb_stddef.h include/deal.II/bundled/tbb/tbb_thread.h include/deal.II/bundled/tbb/tbbmalloc_proxy.h include/deal.II/bundled/tbb/tick_count.h +include/deal.II/bundled/traits/Kokkos_ExecutionSpaceTrait.hpp +include/deal.II/bundled/traits/Kokkos_GraphKernelTrait.hpp +include/deal.II/bundled/traits/Kokkos_IndexTypeTrait.hpp +include/deal.II/bundled/traits/Kokkos_IterationPatternTrait.hpp +include/deal.II/bundled/traits/Kokkos_LaunchBoundsTrait.hpp +include/deal.II/bundled/traits/Kokkos_OccupancyControlTrait.hpp +include/deal.II/bundled/traits/Kokkos_PolicyTraitAdaptor.hpp +include/deal.II/bundled/traits/Kokkos_PolicyTraitMatcher.hpp +include/deal.II/bundled/traits/Kokkos_ScheduleTrait.hpp +include/deal.II/bundled/traits/Kokkos_Traits_fwd.hpp +include/deal.II/bundled/traits/Kokkos_WorkItemPropertyTrait.hpp +include/deal.II/bundled/traits/Kokkos_WorkTagTrait.hpp include/deal.II/cgal/additional_data.h +include/deal.II/cgal/intersections.h include/deal.II/cgal/point_conversion.h include/deal.II/cgal/surface_mesh.h include/deal.II/cgal/triangulation.h @@ -285,6 +749,7 @@ include/deal.II/differentiation/sd/symengine_utilities.h include/deal.II/distributed/cell_data_transfer.h include/deal.II/distributed/cell_data_transfer.templates.h include/deal.II/distributed/cell_weights.h +include/deal.II/distributed/field_transfer.h include/deal.II/distributed/fully_distributed_tria.h include/deal.II/distributed/grid_refinement.h include/deal.II/distributed/p4est_wrappers.h @@ -368,6 +833,7 @@ include/deal.II/fe/mapping_q_cache.h include/deal.II/fe/mapping_q_eulerian.h include/deal.II/fe/mapping_q_generic.h include/deal.II/fe/mapping_q_internal.h +include/deal.II/fe/mapping_related_data.h include/deal.II/gmsh/utilities.h include/deal.II/grid/cell_id.h include/deal.II/grid/cell_id_translator.h @@ -400,8 +866,8 @@ include/deal.II/grid/tria_iterator_base.h include/deal.II/grid/tria_iterator_selector.h include/deal.II/grid/tria_levels.h include/deal.II/grid/tria_objects.h +include/deal.II/grid/tria_objects_orientations.h include/deal.II/hp/collection.h -include/deal.II/hp/dof_handler.h include/deal.II/hp/fe_collection.h include/deal.II/hp/fe_values.h include/deal.II/hp/mapping_collection.h @@ -468,11 +934,12 @@ include/deal.II/lac/linear_operator_tools.h include/deal.II/lac/matrix_block.h include/deal.II/lac/matrix_iterator.h include/deal.II/lac/matrix_out.h +include/deal.II/lac/orthogonalization.h include/deal.II/lac/packaged_operation.h -include/deal.II/lac/parallel_block_vector.h include/deal.II/lac/parpack_solver.h include/deal.II/lac/petsc_block_sparse_matrix.h include/deal.II/lac/petsc_block_vector.h +include/deal.II/lac/petsc_communication_pattern.h include/deal.II/lac/petsc_compatibility.h include/deal.II/lac/petsc_full_matrix.h include/deal.II/lac/petsc_matrix_base.h @@ -482,8 +949,12 @@ include/deal.II/lac/petsc_parallel_block_vector.h include/deal.II/lac/petsc_parallel_sparse_matrix.h include/deal.II/lac/petsc_parallel_vector.h include/deal.II/lac/petsc_precondition.h +include/deal.II/lac/petsc_snes.h +include/deal.II/lac/petsc_snes.templates.h include/deal.II/lac/petsc_solver.h include/deal.II/lac/petsc_sparse_matrix.h +include/deal.II/lac/petsc_ts.h +include/deal.II/lac/petsc_ts.templates.h include/deal.II/lac/petsc_vector.h include/deal.II/lac/petsc_vector_base.h include/deal.II/lac/precondition.h @@ -522,13 +993,16 @@ include/deal.II/lac/sparse_matrix.h include/deal.II/lac/sparse_matrix.templates.h include/deal.II/lac/sparse_matrix_ez.h include/deal.II/lac/sparse_matrix_ez.templates.h +include/deal.II/lac/sparse_matrix_tools.h include/deal.II/lac/sparse_mic.h include/deal.II/lac/sparse_mic.templates.h include/deal.II/lac/sparse_vanka.h include/deal.II/lac/sparse_vanka.templates.h include/deal.II/lac/sparsity_pattern.h +include/deal.II/lac/sparsity_pattern_base.h include/deal.II/lac/sparsity_tools.h include/deal.II/lac/tensor_product_matrix.h +include/deal.II/lac/tensor_product_matrix.templates.h include/deal.II/lac/tridiagonal_matrix.h include/deal.II/lac/trilinos_block_sparse_matrix.h include/deal.II/lac/trilinos_epetra_communication_pattern.h @@ -577,7 +1051,6 @@ include/deal.II/matrix_free/fe_evaluation.h include/deal.II/matrix_free/fe_evaluation_data.h include/deal.II/matrix_free/fe_point_evaluation.h include/deal.II/matrix_free/hanging_nodes_internal.h -include/deal.II/matrix_free/helper_functions.h include/deal.II/matrix_free/mapping_data_on_the_fly.h include/deal.II/matrix_free/mapping_info.h include/deal.II/matrix_free/mapping_info.templates.h @@ -665,10 +1138,12 @@ include/deal.II/numerics/history.h include/deal.II/numerics/matrix_creator.h include/deal.II/numerics/matrix_creator.templates.h include/deal.II/numerics/matrix_tools.h +include/deal.II/numerics/nonlinear.h include/deal.II/numerics/point_value_history.h include/deal.II/numerics/rtree.h include/deal.II/numerics/smoothness_estimator.h include/deal.II/numerics/solution_transfer.h +include/deal.II/numerics/tensor_product_matrix_creator.h include/deal.II/numerics/time_dependent.h include/deal.II/numerics/vector_tools.h include/deal.II/numerics/vector_tools.templates.h @@ -713,26 +1188,29 @@ include/deal.II/physics/notation.h include/deal.II/physics/transformations.h include/deal.II/physics/vector_relations.h include/deal.II/sundials/arkode.h -include/deal.II/sundials/copy.h include/deal.II/sundials/ida.h include/deal.II/sundials/kinsol.h include/deal.II/sundials/n_vector.h include/deal.II/sundials/n_vector.templates.h include/deal.II/sundials/sunlinsol_wrapper.h +include/deal.II/sundials/utilities.h +include/deal.II/trilinos/nox.h +include/deal.II/trilinos/nox.templates.h lib/cmake/deal.II/deal.IIConfig.cmake lib/cmake/deal.II/deal.IIConfigVersion.cmake -lib/cmake/deal.II/deal.IIFeatureConfig.cmake lib/cmake/deal.II/deal.IITargets-%%CMAKE_BUILD_TYPE%%.cmake lib/cmake/deal.II/deal.IITargets.cmake lib/libdeal_II.so -lib/libdeal_II.so.9.4.2 -libdata/pkgconfig/deal.II_%%CMAKE_BUILD_TYPE%%.pc +lib/libdeal_II.so.9.5.0 %%DATADIR%%/macros/macro_deal_ii_add_test.cmake %%DATADIR%%/macros/macro_deal_ii_initialize_cached_variables.cmake %%DATADIR%%/macros/macro_deal_ii_invoke_autopilot.cmake %%DATADIR%%/macros/macro_deal_ii_pickup_tests.cmake %%DATADIR%%/macros/macro_deal_ii_query_git_information.cmake %%DATADIR%%/macros/macro_deal_ii_setup_target.cmake +%%DATADIR%%/macros/macro_shell_escape_option_groups.cmake +%%DATADIR%%/macros/macro_target_compile_flags.cmake +%%DATADIR%%/macros/macro_target_link_flags.cmake %%DATADIR%%/scripts/get_closest_tag.sh %%DATADIR%%/scripts/get_latest_tag.sh %%DATADIR%%/scripts/indent.py