From owner-freebsd-pkg-fallout@freebsd.org Sun Nov 22 21:58:35 2020 Return-Path: Delivered-To: freebsd-pkg-fallout@mailman.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mailman.nyi.freebsd.org (Postfix) with ESMTP id 3C4E44761E4 for ; Sun, 22 Nov 2020 21:58:35 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from mailman.nyi.freebsd.org (unknown [127.0.1.3]) by mx1.freebsd.org (Postfix) with ESMTP id 4CfPLM1BFqz4WkC for ; Sun, 22 Nov 2020 21:58:35 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: by mailman.nyi.freebsd.org (Postfix) id 268D7476326; Sun, 22 Nov 2020 21:58:35 +0000 (UTC) Delivered-To: pkg-fallout@mailman.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mailman.nyi.freebsd.org (Postfix) with ESMTP id 25149476325 for ; Sun, 22 Nov 2020 21:58:35 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256 client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "Let's Encrypt Authority X3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 4CfPLM07zqz4WXY; Sun, 22 Nov 2020 21:58:35 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from beefy9.nyi.freebsd.org (beefy9.nyi.freebsd.org [IPv6:2610:1c1:1:6080::16:ec]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id E6FE62162E; Sun, 22 Nov 2020 21:58:34 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from beefy9.nyi.freebsd.org (localhost [127.0.0.1]) by beefy9.nyi.freebsd.org (8.16.1/8.16.1) with ESMTP id 0AMLwYeg034243; Sun, 22 Nov 2020 21:58:34 GMT (envelope-from pkg-fallout@FreeBSD.org) Received: (from root@localhost) by beefy9.nyi.freebsd.org (8.16.1/8.16.1/Submit) id 0AMLwY6p034242; Sun, 22 Nov 2020 21:58:34 GMT (envelope-from pkg-fallout@FreeBSD.org) Date: Sun, 22 Nov 2020 21:58:34 GMT From: pkg-fallout@FreeBSD.org Message-Id: <202011222158.0AMLwY6p034242@beefy9.nyi.freebsd.org> To: yuri@FreeBSD.org Subject: [package - 114amd64-default][science/lammps] Failed for lammps-2020.10.29 in configure Cc: pkg-fallout@FreeBSD.org X-BeenThere: freebsd-pkg-fallout@freebsd.org X-Mailman-Version: 2.1.34 Precedence: list List-Id: Fallout logs from package building List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Sun, 22 Nov 2020 21:58:35 -0000 You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: yuri@FreeBSD.org Last committer: yuri@FreeBSD.org Ident: $FreeBSD: head/science/lammps/Makefile 553581 2020-10-29 04:35:35Z yuri $ Log URL: http://beefy9.nyi.freebsd.org/data/114amd64-default/556025/logs/lammps-2020.10.29.log Build URL: http://beefy9.nyi.freebsd.org/build.html?mastername=114amd64-default&build=556025 Log: =>> Building science/lammps build started at Sun Nov 22 21:57:51 UTC 2020 port directory: /usr/ports/science/lammps package name: lammps-2020.10.29 building for: FreeBSD 114amd64-default-job-05 11.4-RELEASE-p4 FreeBSD 11.4-RELEASE-p4 amd64 maintained by: yuri@FreeBSD.org Makefile ident: $FreeBSD: head/science/lammps/Makefile 553581 2020-10-29 04:35:35Z yuri $ Poudriere version: 3.2.8-8-gaf08dbda Host OSVERSION: 1300121 Jail OSVERSION: 1104001 Job Id: 05 ---Begin Environment--- SHELL=/bin/csh OSVERSION=1104001 UNAME_v=FreeBSD 11.4-RELEASE-p4 UNAME_r=11.4-RELEASE-p4 BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-8-gaf08dbda MASTERMNT=/usr/local/poudriere/data/.m/114amd64-default/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= PWD=/usr/local/poudriere/data/.m/114amd64-default/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=114amd64-default SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/114amd64-default/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ===> The following configuration options are available for lammps-2020.10.29: EXCEPTIONS=on: Enable the use of C++ exceptions FFMPEG=on: FFmpeg support (WMA, AIFF, AC3, APE...) GZIP=on: Enable GZIP support JPEG=on: JPEG image format support PNG=on: PNG image format support ====> Enable parallelizations: MPI=on: MPI (Message Passing Interface) support OPENMP=on: Parallel processing support via OpenMP ====> Enable packages: H5MD=on: USER-H5MD package based on libhdf5 KIM=on: KIM package based on the OpenKim library/repository KOKKOS=on: kokkos package based on the libkokkos library LATTE=on: latte package based on the liblatte library PLUMED=on: plumed package based on the plumed library VORONOI=on: voro++, Voronoi tessellation package VTK=off: USER-VTK package based on the external vtk package ===> Use 'make config' to modify these settings ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- F77="gfortran9" FC="gfortran9" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc9" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc9" PKG_CONFIG=pkgconf XDG_DATA_HOME=/wrkdirs/usr/ports/science/lammps/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/lammps/work HOME=/wrkdirs/usr/ports/science/lammps/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/lammps/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh CMAKE_PREFIX_PATH="/usr/local" --End CONFIGURE_ENV-- --MAKE_ENV-- F77="gfortran9" FC="gfortran9" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc9" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc9" XDG_DATA_HOME=/wrkdirs/usr/ports/science/lammps/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/lammps/work HOME=/wrkdirs/usr/ports/science/lammps/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/lammps/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-alias ing " CPP="cpp" CPPFLAGS="-isystem /usr/local/include" LDFLAGS=" -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc9 -L/usr/local/lib/gcc9 -B/usr/local/bin -fstack-protector-strong -L/usr/local/lib " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- EXCEPTIONS="" NO_EXCEPTIONS="@comment " FFMPEG="" NO_FFMPEG="@comment " GZIP="" NO_GZIP="@comment " H5MD="" NO_H5MD="@comment " JPEG="" NO_JPEG="@comment " KIM="" NO_KIM="@comment " KOKKOS="" NO_KOKKOS="@comment " LATTE="" NO_LATTE="@comment " MPI="" NO_MPI="@comment " OPENMP="" NO_OPENMP="@comment " PLUMED="" NO_PLUMED="@comment " PNG="" NO_PNG="@comment " VORONOI="" NO_VORONOI="@comment " VTK="@comment " NO_VTK="" CMAKE_BUILD_TYPE="release" OSREL=11.4 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/lammps" EXAMPLESDIR="share/examples/lammps" DATADIR="share/lammps" WWWDIR="www/lammps" ETCDIR="etc/lammps" --End PLIST_SUB-- --SUB_LIST-- EXCEPTIONS="" NO_EXCEPTIONS="@comment " FFMPEG="" NO_FFMPEG="@comment " GZIP="" NO_GZIP="@comment " H5MD="" NO_H5MD="@comment " JPEG="" NO_JPEG="@comment " KIM="" NO_KIM="@comment " KOKKOS="" NO_KOKKOS="@comment " LATTE="" NO_LATTE="@comment " MPI="" NO_MPI="@comment " OPENMP="" NO_OPENMP="@comment " PLUMED="" NO_PLUMED="@comment " PNG="" NO_PNG="@comment " VORONOI="" NO_VORONOI="@comment " VTK="@comment " NO_VTK="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/lammps DOCSDIR=/usr/local/share/doc/lammps EXAMPLESDIR=/usr/local/share/examples/lammps WWWDIR=/usr/local/www/lammps ETCDIR=/usr/local/etc/lammps --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 #### /usr/ports/Mk/Scripts/ports_env.sh #### _CCVERSION_921dbbb2=FreeBSD clang version 10.0.0 (git@github.com:llvm/llvm-project.git llvmorg-10.0.0-0-gd32170dbd5b) Target: x86_64-unknown-freebsd11.4 Thread model: posix InstalledDir: /usr/bin _ALTCCVERSION_921dbbb2=none _CXXINTERNAL_acaad9ca=FreeBSD clang version 10.0.0 (git@github.com:llvm/llvm-project.git llvmorg-10.0.0-0-gd32170dbd5b) Target: x86_64-unknown-freebsd11.4 Thread model: posix InstalledDir: /usr/bin "/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_921dbbb2_58173849=yes CC_OUTPUT_921dbbb2_9bdba57c=yes CC_OUTPUT_921dbbb2_6a4fe7f5=yes CC_OUTPUT_921dbbb2_6bcac02b=yes CC_OUTPUT_921dbbb2_67d20829=yes CC_OUTPUT_921dbbb2_bfa62e83=yes CC_OUTPUT_921dbbb2_f0b4d593=yes CC_OUTPUT_921dbbb2_308abb44=yes CC_OUTPUT_921dbbb2_f00456e5=yes CC_OUTPUT_921dbbb2_65ad290d=yes CC_OUTPUT_921dbbb2_f2776b26=yes CC_OUTPUT_921dbbb2_b2657cc3=yes CC_OUTPUT_921dbbb2_380987f7=yes CC_OUTPUT_921dbbb2_160933ec=yes CC_OUTPUT_921dbbb2_fb62803b=yes _OBJC_CCVERSION_921dbbb2=FreeBSD clang version 10.0.0 (git@github.com:llvm/llvm-project.git llvmorg-10.0.0-0-gd32170dbd5b) Target: x86_64-unknown-freebsd11.4 Thread model: posix InstalledDir: /usr/bin _OBJC_ALTCCVERSION_921dbbb2=none ARCH=amd64 OPSYS=FreeBSD _OSRELEASE=11.4-RELEASE-p4 OSREL=11.4 OSVERSION=1104001 PYTHONBASE=/usr/local HAVE_COMPAT_IA32_KERN=YES CONFIGURE_MAX_CMD_LEN=524288 HAVE_PORTS_ENV=1 #### Misc Poudriere #### GID=0 UID=0 DISABLE_MAKE_JOBS=poudriere ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =================================================== ===> License GPLv2 accepted by the user =========================================================================== =================================================== ===> lammps-2020.10.29 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.15.10.txz [114amd64-default-job-05] Installing pkg-1.15.10... [114amd64-default-job-05] Extracting pkg-1.15.10: .......... done ===> lammps-2020.10.29 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of lammps-2020.10.29 =========================================================================== =================================================== =========================================================================== =================================================== ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by lammps-2020.10.29 for building =========================================================================== =================================================== ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by lammps-2020.10.29 for building => SHA256 Checksum OK for lammps-lammps-2020.10.29-patch_29Oct2020_GH0.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by lammps-2020.10.29 for building ===> Extracting for lammps-2020.10.29 => SHA256 Checksum OK for lammps-lammps-2020.10.29-patch_29Oct2020_GH0.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> Patching for lammps-2020.10.29 ===> Applying FreeBSD patches for lammps-2020.10.29 from /usr/ports/science/lammps/files =========================================================================== =================================================== ===> lammps-2020.10.29 depends on executable: ffmpeg - not found [114amd64-default-job-05] | | `-- Extracting libsysinfo-0.0.3_2: ......... done [114amd64-default-job-05] | | `-- Installing lua52-5.2.4... [114amd64-default-job-05] | | `-- Installing libedit-3.1.20191231,1... [114amd64-default-job-05] | | `-- Extracting libedit-3.1.20191231,1: .......... done [114amd64-default-job-05] | | `-- Extracting lua52-5.2.4: ......... done ===> Creating groups. Creating group 'slurm' with gid '468'. ===> Creating users Creating user 'slurm' with uid '468'. [114amd64-default-job-05] | `-- Extracting slurm-wlm-20.02.1_2: .......... done [114amd64-default-job-05] `-- Extracting openmpi-4.0.5: .......... done [114amd64-default-job-05] Extracting latte-1.2.2: ......... done ===> lammps-2020.10.29 depends on shared library: liblatte.so - found (/usr/local/lib/liblatte.so) ===> Returning to build of lammps-2020.10.29 ===> lammps-2020.10.29 depends on shared library: libmpi.so - found (/usr/local/mpi/openmpi/lib/libmpi.so) ===> lammps-2020.10.29 depends on shared library: libplumed.so - not found ===> Installing existing package /packages/All/plumed-2.6.2.txz [114amd64-default-job-05] Installing plumed-2.6.2... [114amd64-default-job-05] Extracting plumed-2.6.2: .......... done ===> lammps-2020.10.29 depends on shared library: libplumed.so - found (/usr/local/lib/libplumed.so) ===> Returning to build of lammps-2020.10.29 ===> lammps-2020.10.29 depends on shared library: libpng.so - found (/usr/local/lib/libpng.so) ===> lammps-2020.10.29 depends on shared library: libvoro++.so - not found ===> Installing existing package /packages/All/voro++-0.4.6_1.txz [114amd64-default-job-05] Installing voro++-0.4.6_1... [114amd64-default-job-05] Extracting voro++-0.4.6_1: .......... done ===> lammps-2020.10.29 depends on shared library: libvoro++.so - found (/usr/local/lib/libvoro++.so) ===> Returning to build of lammps-2020.10.29 ===> lammps-2020.10.29 depends on shared library: libopenblas.so - found (/usr/local/lib/libopenblas.so) ===> lammps-2020.10.29 depends on shared library: libjpeg.so - found (/usr/local/lib/libjpeg.so) =========================================================================== =================================================== ===> Configuring for lammps-2020.10.29 ===> Performing out-of-source build /bin/mkdir -p /wrkdirs/usr/ports/science/lammps/work/.build -- The CXX compiler identification is Clang 10.0.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Could NOT find Git (missing: GIT_EXECUTABLE) -- Running check for auto-generated files from make-based build system -- Found MPI_CXX: /usr/local/mpi/openmpi/lib/libmpi_cxx.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Looking for C++ include omp.h -- Looking for C++ include omp.h - found -- Found OpenMP_CXX: -fopenmp=libomp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- The C compiler identification is Clang 10.0.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Looking for sgemm_ -- Looking for sgemm_ - found -- Found BLAS: /usr/local/lib/libopenblas.so -- Looking for cheev_ -- Looking for cheev_ - found -- A library with LAPACK API found. -- Found JPEG: /usr/local/lib/libjpeg.so (found version "80") -- Found PNG: /usr/local/lib/libpng.so (found version "1.6.37+apng") -- Found ZLIB: /usr/lib/libz.so (found version "1.2.11") -- Found GZIP: /usr/bin/gzip -- Found FFMPEG: /usr/local/bin/ffmpeg -- Found PkgConfig: pkgconf (found version "1.7.3") -- Checking for module 'fftw3' -- Found fftw3, version 3.3.8 -- Found FFTW3: /usr/local/lib/libfftw3.so -- Found VORO: /usr/local/lib/libvoro++.so -- Checking for module 'plumed' -- Found plumed, version 2.6.2 -- Found CURL: /usr/local/lib/libcurl.so (found version "7.73.0") -- Checking for module 'libkim-api>=2.1.3' -- Found libkim-api, version 2.2.0 -- The Fortran compiler identification is GNU 9.3.0 -- Detecting Fortran compiler ABI info -- Detecting Fortran compiler ABI info - done -- Check for working Fortran compiler: /usr/local/bin/gfortran9 - skipped -- Checking whether /usr/local/bin/gfortran9 supports Fortran 90 -- Checking whether /usr/local/bin/gfortran9 supports Fortran 90 - yes -- Found MPI_C: /usr/local/mpi/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI_Fortran: /usr/local/mpi/openmpi/lib/libmpi_usempi.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Found OpenMP_C: -fopenmp=libomp (found version "4.5") -- Found OpenMP_CXX: -fopenmp=libomp (found version "4.5") -- Found OpenMP_Fortran: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- Found OpenMP_C: -fopenmp=libomp (found version "4.5") -- Found OpenMP_CXX: -fopenmp=libomp (found version "4.5") -- Found OpenMP_Fortran: -fopenmp (found version "4.5") -- Checking for module 'libzstd>=1.4' -- Package 'libzstd', required by 'virtual:world', not found -- Looking for C++ include cmath -- Looking for C++ include cmath - found -- Found HDF5: /usr/local/lib/libhdf5.so;/usr/local/lib/libsz.so;/usr/lib/libz.so;/usr/lib/libdl.so;/usr/lib/libm.so (found version "1.10.6") -- Enabled Kokkos devices: SERIAL -- Generating style headers... -- Generating package headers... -- Generating lmpinstalledpkgs.h... -- Found Python: /usr/local/bin/python3.7 (found version "3.7.9") found components: Interpreter -- The following tools and libraries have been found and configured: * LAPACK * BLAS * JPEG * PNG * FFTW3 * VORO * Eigen3 * CURL * MPI * OpenMP * LATTE (required version >= 1.2.2) * ZLIB * PkgConfig * HDF5 * Kokkos (required version >= 3.2.00) * Python -- <<< Build configuration >>> Operating System: FreeBSD Build type: Release Install path: /usr/local Generator: Unix Makefiles using /usr/bin/make -- Enabled packages: ASPHERE;BODY;CLASS2;COLLOID;COMPRESS;DIPOLE;GRANULAR;KIM;KOKKOS;KSPACE;LATTE;MANYBODY;MC;MESSAGE;MISC;MOLECULE;MPIIO;PERI;POEMS;QEQ;REPLICA;RIGID;SHOCK;SNAP;SPIN;SRD;USER-ATC;USER-AWPMD;USER-BOCS;USER-CGDNA;USER-CGSDK;USER-COLVARS;USER-DIFFRACTION;USER-DPD;USER-DRUDE;USER-EFF;USER-FEP;USER-H5MD;USER-LB;USER-MANIFOLD;USER-MEAMC;USER-MESODPD;USER-MGPT;USER-MISC;USER-MOFFF;USER-MOLFILE;USER-PHONON;USER-PLUMED;USER-PTM;USER-QMMM;USER-QTB;USER-REACTION;USER-REAXC;USER-SDPD;USER-SMD;USER-SMTBQ;USER-SPH;USER-TALLY;USER-UEF;USER-YAFF;VORONOI -- <<< Compilers and Flags: >>> -- C++ Compiler: /usr/bin/c++ Type: Clang Version: 10.0.0 C++ Flags: -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include Defines: LAMMPS_SMALLBIG;LAMMPS_MEMALIGN=64;LAMMPS_EXCEPTIONS;LAMMPS_OMP_COMPAT=4;LAMMPS_JPEG;LAMMPS_PNG;LAMMPS_GZIP;LAMMPS_FFMPEG;FFT_FFTW3;LMP_KIM_CURL;LMP_MPIIO;LMP_KOKKOS -- Fortran Compiler: /usr/local/bin/gfortran9 Type: GNU Version: 9.3.0 Fortran Flags:-O -Wl,-rpath=/usr/local/lib/gcc9 -O3 -DNDEBUG -O3 -- C compiler: /usr/bin/cc Type: Clang Version: 10.0.0 C Flags: -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -- <<< Linker flags: >>> -- Executable name: lmp -- Executable linker flags: -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc9 -L/usr/local/lib/gcc9 -B/usr/local/bin -fstack-protector-strong -L/usr/local/lib -- Shared library flags: -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc9 -L/usr/local/lib/gcc9 -B/usr/local/bin -fstack-protector-strong -L/usr/local/lib -- <<< MPI flags >>> -- MPI_defines: -- MPI includes: /usr/local/mpi/openmpi/include -- MPI libraries: /usr/local/mpi/openmpi/lib/libmpi_cxx.so;/usr/local/mpi/openmpi/lib/libmpi.so;/usr/local/mpi/openmpi/lib/libmpi_usempi.so;/usr/local/mpi/openmpi/lib/libmpi_mpifh.so;/usr/local/mpi/openmpi/lib/libmpi.so -- Kokkos Arch: -- <<< FFT settings >>> -- Primary FFT lib: FFTW3 -- Using double precision FFTs -- Using non-threaded FFTs -- Kokkos FFT: FFTW3 -- Configuring done CMake Error in CMakeLists.txt: Imported target "PkgConfig::KIM-API" includes non-existent path "/usr/local/libdata/pkgconfig/../kim-api/mod" in its INTERFACE_INCLUDE_DIRECTORIES. Possible reasons include: * The path was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and references files it does not provide. CMake Error in CMakeLists.txt: Imported target "PkgConfig::KIM-API" includes non-existent path "/usr/local/libdata/pkgconfig/../kim-api/mod" in its INTERFACE_INCLUDE_DIRECTORIES. Possible reasons include: * The path was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and references files it does not provide. -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_MODULE_LINKER_FLAGS THREADS_HAVE_PTHREAD_ARG CMake Generate step failed. Build files cannot be regenerated correctly. *** Error code 1 Stop. make: stopped in /usr/ports/science/lammps