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Bacon" Date: Sat, 6 Mar 2021 17:55:38 +0000 (UTC) To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r567503 - in head: archivers/py-xopen biology/py-cutadapt X-SVN-Group: ports-head X-SVN-Commit-Author: jwb X-SVN-Commit-Paths: in head: archivers/py-xopen biology/py-cutadapt X-SVN-Commit-Revision: 567503 X-SVN-Commit-Repository: ports MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit X-BeenThere: svn-ports-all@freebsd.org X-Mailman-Version: 2.1.34 Precedence: list List-Id: SVN commit messages for the ports tree List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Sat, 06 Mar 2021 17:55:39 -0000 Author: jwb Date: Sat Mar 6 17:55:38 2021 New Revision: 567503 URL: https://svnweb.freebsd.org/changeset/ports/567503 Log: py-cutadapt: Update to 3.3 Numerous small bug fixes and enhancements, code refactoring py-xopen: Update to 1.1.0 Required by cutadapt 3.3 Drop python 3.5 support Add isal support (not yet utilized in FreeBSD port) Modified: head/archivers/py-xopen/Makefile head/archivers/py-xopen/distinfo head/biology/py-cutadapt/Makefile head/biology/py-cutadapt/distinfo Modified: head/archivers/py-xopen/Makefile ============================================================================== --- head/archivers/py-xopen/Makefile Sat Mar 6 17:49:59 2021 (r567502) +++ head/archivers/py-xopen/Makefile Sat Mar 6 17:55:38 2021 (r567503) @@ -1,7 +1,7 @@ # $FreeBSD$ PORTNAME= xopen -DISTVERSION= 1.0.0 # py-cutadapt requires 1.0.x +DISTVERSION= 1.1.0 # py-cutadapt 3.3 requires 1.1.x CATEGORIES= archivers python MASTER_SITES= CHEESESHOP PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} Modified: head/archivers/py-xopen/distinfo ============================================================================== --- head/archivers/py-xopen/distinfo Sat Mar 6 17:49:59 2021 (r567502) +++ head/archivers/py-xopen/distinfo Sat Mar 6 17:55:38 2021 (r567503) @@ -1,3 +1,3 @@ -TIMESTAMP = 1612290513 -SHA256 (xopen-1.0.0.tar.gz) = 2fd9f537d96c6fb2f0bfed2c5ea133d8961dcef0baa3d8c388cb8bea2af5b090 -SIZE (xopen-1.0.0.tar.gz) = 17487 +TIMESTAMP = 1615045123 +SHA256 (xopen-1.1.0.tar.gz) = 38277eb96313b2e8822e19e793791801a1f41bf13ee5b48616a97afc65e9adb3 +SIZE (xopen-1.1.0.tar.gz) = 17836 Modified: head/biology/py-cutadapt/Makefile ============================================================================== --- head/biology/py-cutadapt/Makefile Sat Mar 6 17:49:59 2021 (r567502) +++ head/biology/py-cutadapt/Makefile Sat Mar 6 17:55:38 2021 (r567503) @@ -1,7 +1,7 @@ # $FreeBSD$ PORTNAME= cutadapt -DISTVERSION= 3.2 +DISTVERSION= 3.3 CATEGORIES= biology python MASTER_SITES= CHEESESHOP PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} @@ -13,7 +13,7 @@ LICENSE= MIT LICENSE_FILE= ${WRKSRC}/LICENSE BUILD_DEPENDS= ${PYTHON_PKGNAMEPREFIX}setuptools_scm>0:devel/py-setuptools_scm@${PY_FLAVOR} -RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}xopen==1.0:archivers/py-xopen@${PY_FLAVOR} \ +RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}xopen==1.1:biology/py-xopen@${PY_FLAVOR} \ ${PYTHON_PKGNAMEPREFIX}dnaio==0.5:biology/py-dnaio@${PY_FLAVOR} TEST_DEPENDS= ${PYTHON_PKGNAMEPREFIX}pytest>0:devel/py-pytest@${PY_FLAVOR} \ ${PYTHON_PKGNAMEPREFIX}pytest-timeout>0:devel/py-pytest-timeout@${PY_FLAVOR} Modified: head/biology/py-cutadapt/distinfo ============================================================================== --- head/biology/py-cutadapt/distinfo Sat Mar 6 17:49:59 2021 (r567502) +++ head/biology/py-cutadapt/distinfo Sat Mar 6 17:55:38 2021 (r567503) @@ -1,3 +1,3 @@ -TIMESTAMP = 1612289840 -SHA256 (cutadapt-3.2.tar.gz) = 82c063129d0449d3c0bfb9b849db2bee6b226d3d1c31cad68011e2473791dc75 -SIZE (cutadapt-3.2.tar.gz) = 292702 +TIMESTAMP = 1615045047 +SHA256 (cutadapt-3.3.tar.gz) = cf502bd0df120d584524ea0e834b45135233c38089e900bd41c3d5cd41ee6eea +SIZE (cutadapt-3.3.tar.gz) = 294579