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Date:      Sun, 14 Sep 2003 22:29:47 -0500 (CDT)
From:      Mark Linimon <linimon@lonesome.com>
To:        FreeBSD-gnats-submit@FreeBSD.org
Subject:   ports/56882: mark biology/tinker as BROKEN
Message-ID:  <200309150329.h8F3Tl2U006973@lonesome.lonesome.com>
Resent-Message-ID: <200309150330.h8F3UH8V032059@freefall.freebsd.org>

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>Number:         56882
>Category:       ports
>Synopsis:       mark biology/tinker as BROKEN
>Confidential:   no
>Severity:       non-critical
>Priority:       low
>Responsible:    freebsd-ports-bugs
>State:          open
>Quarter:        
>Keywords:       
>Date-Required:
>Class:          change-request
>Submitter-Id:   current-users
>Arrival-Date:   Sun Sep 14 20:30:16 PDT 2003
>Closed-Date:
>Last-Modified:
>Originator:     Mark Linimon
>Release:        FreeBSD 4.9-PRERELEASE i386
>Organization:
Lonesome Dove Computing Services
>Environment:
System: FreeBSD lonesome.lonesome.com 4.9-PRERELEASE FreeBSD 4.9-PRERELEASE #0: Fri Sep 5 01:19:33 CDT 2003 linimon@lonesome.lonesome.com:/usr/src/sys/compile/MULTIMEDIA_DEBUG i386
>Description:
	New distfile 9/13.  "Changes from TINKER 4.0 include some new force
	field parameter sets, improvements to rigid body dynamics, a
	Nose-Hoover thermostat, and numerous minor additions and bug fixes."

	However, the compilation fails in sockets.c with an undefined
	ref to <jni.h>.  This is part of: "an interface between TINKER Fortran
	code and FFE Java objects used for socket based communication."

	Some interested party is going to have to take up this one, I'm
	afraid, as I have no idea what is involved.
>How-To-Repeat:
	make extract
>Fix:

--- tinker/Makefile.dist	Sun Jul 27 12:14:14 2003
+++ tinker/Makefile	Sun Sep 14 22:26:34 2003
@@ -6,7 +6,7 @@
 #
 
 PORTNAME=	tinker
-PORTVERSION=	4.0
+PORTVERSION=	4.1
 CATEGORIES=	biology
 MASTER_SITES=	ftp://dasher.wustl.edu/pub/
 DISTNAME=	${PORTNAME}
@@ -23,6 +23,7 @@
 INSTALL_TARGET=	rename
 USE_REINPLACE=	yes
 RESTRICTED=	author requests no distribution except from his FTP site
+BROKEN=		"fails to compile the interface between TINKER Fortran code and FFE Java objects"
 
 pre-fetch:
 	@${ECHO_MSG} ""
--- tinker/distinfo.dist	Sun Jul 27 12:14:14 2003
+++ tinker/distinfo	Sun Sep 14 22:16:01 2003
@@ -1 +1 @@
-MD5 (tinker.tar.gz) = 571224cc0de71099b59de74b3dca648d
+MD5 (tinker.tar.gz) = 20e1425e33dca667a84ae8c384f07ea7
>Release-Note:
>Audit-Trail:
>Unformatted:



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