Date: Fri, 12 Nov 2021 20:32:55 GMT From: pkg-fallout@FreeBSD.org To: pkg-fallout@FreeBSD.org Subject: [package - 130releng-armv7-quarterly][science/avogadrolibs] Failed for avogadrolibs-1.94.0_2 in build/runaway Message-ID: <202111122032.1ACKWtn6081167@beefy12.nyi.freebsd.org>
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You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: yuri@FreeBSD.org Log URL: http://beefy12.nyi.freebsd.org/data/130releng-armv7-quarterly/817404d72a31/logs/avogadrolibs-1.94.0_2.log Build URL: http://beefy12.nyi.freebsd.org/build.html?mastername=130releng-armv7-quarterly&build=817404d72a31 Log: =>> Building science/avogadrolibs build started at Fri Nov 12 13:54:23 UTC 2021 port directory: /usr/ports/science/avogadrolibs package name: avogadrolibs-1.94.0_2 building for: FreeBSD 130releng-armv7-quarterly-job-12 13.0-RELEASE-p5 FreeBSD 13.0-RELEASE-p5 1300139 arm maintained by: yuri@FreeBSD.org Makefile ident: Poudriere version: 3.2.8-21-g883afb07 Host OSVERSION: 1400003 Jail OSVERSION: 1300139 Job Id: 12 ---Begin Environment--- SHELL=/bin/csh UNAME_p=armv7 UNAME_m=arm ABI_FILE=/usr/lib/crt1.o OSVERSION=1300139 UNAME_v=FreeBSD 13.0-RELEASE-p5 1300139 UNAME_r=13.0-RELEASE-p5 BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local QEMU_EMULATING=1 USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-21-g883afb07 MASTERMNT=/usr/local/poudriere/data/.m/130releng-armv7-quarterly/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= PWD=/usr/local/poudriere/data/.m/130releng-armv7-quarterly/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=130releng-armv7-quarterly SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/130releng-armv7-quarterly/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ===> The following configuration options are available for avogadrolibs-1.94.0_2: HDF5=off: HDF-5 data format support LIBARCHIVE=on: Enable optional Libarchive features LIBMSYM=on: Enable optional features using libmsym MMTF=on: Enable optional features using mmtf OPENGL=on: 2D/3D rendering support via OpenGL QT5=on: Qt 5 toolkit support SPGLIB=on: Enable optional features using spglib VTK=off: Enable libraries that use VTK ===> Use 'make config' to modify these settings ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- QT_SELECT=qt5 QMAKEMODULES="/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/mkspecs/modules:/usr/local/lib/qt5/mkspecs/modules" XDG_DATA_HOME=/wrkdirs/usr/ports/science/avogadrolibs/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/avogadrolibs/work HOME=/wrkdirs/usr/ports/science/avogadrolibs/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/avogadrolibs/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh CMAKE_PREFIX_PATH="/usr/local" --End 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OSREL=13.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/avogadrolibs" EXAMPLESDIR="share/examples/avogadrolibs" DATADIR="share/avogadrolibs" WWWDIR="www/avogadrolibs" ETCDIR="etc/avogadrolibs" --End PLIST_SUB-- --SUB_LIST-- HDF5="@comment " NO_HDF5="" LIBARCHIVE="" NO_LIBARCHIVE="@comment " LIBMSYM="" NO_LIBMSYM="@comment " MMTF="" NO_MMTF="@comment " OPENGL="" NO_OPENGL="@comment " QT5="" NO_QT5="@comment " SPGLIB="" NO_SPGLIB="@comment " VTK="@comment " NO_VTK="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/avogadrolibs DOCSDIR=/usr/local/share/doc/avogadrolibs EXAMPLESDIR=/usr/local/share/examples/avogadrolibs WWWDIR=/usr/local/www/avogadrolibs ETCDIR=/usr/local/etc/avogadrolibs --End SUB_LIST-- ---Begin make.conf--- .sinclude "/etc/make.nxb.conf" USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes MACHINE=arm MACHINE_ARCH=armv7 ARCH=${MACHINE_ARCH} #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. 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It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 #### /usr/ports/Mk/Scripts/ports_env.sh #### _CCVERSION_9d218390=FreeBSD clang version 11.0.1 (git@github.com:llvm/llvm-project.git llvmorg-11.0.1-0-g43ff75f2c3fe) Target: armv7-unknown-freebsd13.0-gnueabihf Thread model: posix InstalledDir: /nxb-bin/usr/bin _ALTCCVERSION_9d218390=none _CXXINTERNAL_9c45a5b1=FreeBSD clang version 11.0.1 (git@github.com:llvm/llvm-project.git llvmorg-11.0.1-0-g43ff75f2c3fe) Target: armv7-unknown-freebsd13.0-gnueabihf Thread model: posix InstalledDir: /nxb-bin/usr/bin "/nxb-bin/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_9d218390_58173849=yes CC_OUTPUT_9d218390_9bdba57c=yes CC_OUTPUT_9d218390_6a4fe7f5=yes CC_OUTPUT_9d218390_6bcac02b=yes CC_OUTPUT_9d218390_67d20829=yes CC_OUTPUT_9d218390_bfa62e83=yes CC_OUTPUT_9d218390_f0b4d593=yes CC_OUTPUT_9d218390_308abb44=yes CC_OUTPUT_9d218390_f00456e5=yes CC_OUTPUT_9d218390_65ad290d=yes CC_OUTPUT_9d218390_f2776b26=yes CC_OUTPUT_9d218390_b2657cc3=yes CC_OUTPUT_9d218390_380987f7=yes CC_OUTPUT_9d218390_160933ec=yes CC_OUTPUT_9d218390_fb62803b=yes _OBJC_CCVERSION_9d218390=FreeBSD clang version 11.0.1 (git@github.com:llvm/llvm-project.git llvmorg-11.0.1-0-g43ff75f2c3fe) Target: armv7-unknown-freebsd13.0-gnueabihf Thread model: posix InstalledDir: /nxb-bin/usr/bin _OBJC_ALTCCVERSION_9d218390=none ARCH=armv7 OPSYS=FreeBSD _OSRELEASE=13.0-RELEASE-p5 OSREL=13.0 OSVERSION=1300139 PYTHONBASE=/usr/local CONFIGURE_MAX_CMD_LEN=524288 HAVE_PORTS_ENV=1 #### Misc Poudriere #### GID=0 UID=0 DISABLE_MAKE_JOBS=poudriere ---End make.conf--- ---Begin make.nxb.conf--- CC=/nxb-bin/usr/bin/cc CPP=/nxb-bin/usr/bin/cpp CXX=/nxb-bin/usr/bin/c++ NM=/nxb-bin/usr/bin/nm LD=/nxb-bin/usr/bin/ld OBJCOPY=/nxb-bin/usr/bin/objcopy SIZE=/nxb-bin/usr/bin/size STRIPBIN=/nxb-bin/usr/bin/strip SED=/nxb-bin/usr/bin/sed RANLIB=/nxb-bin/usr/bin/ranlib YACC=/nxb-bin/usr/bin/yacc MAKE=/nxb-bin/usr/bin/make STRINGS=/nxb-bin/usr/bin/strings AWK=/nxb-bin/usr/bin/awk FLEX=/nxb-bin/usr/bin/flex ---End make.nxb.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===> License GPLv2 accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===> avogadrolibs-1.94.0_2 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.17.2.pkg [130releng-armv7-quarterly-job-12] Installing pkg-1.17.2... [130releng-armv7-quarterly-job-12] Extracting pkg-1.17.2: .......... done ===> avogadrolibs-1.94.0_2 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of avogadrolibs-1.94.0_2 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by avogadrolibs-1.94.0_2 for building =========================================================================== =======================<phase: checksum >============================ ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by avogadrolibs-1.94.0_2 for building <snip> to problems in calling code that expects `find_package` result variables (e.g., `_FOUND`) to follow a certain pattern. Call Stack (most recent call first): cmake/FindLibArchive.cmake:17 (find_package_handle_standard_args) avogadro/qtplugins/plugindownloader/CMakeLists.txt:3 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. -- Found LIBARCHIVE: /usr/local/include msym include dir /usr/local/lib/cmake/libmsym/../../../include CMake Warning (dev) at /usr/local/share/cmake/Modules/FindOpenGL.cmake:315 (message): Policy CMP0072 is not set: FindOpenGL prefers GLVND by default when available. Run "cmake --help-policy CMP0072" for policy details. Use the cmake_policy command to set the policy and suppress this warning. FindOpenGL found both a legacy GL library: OPENGL_gl_LIBRARY: /usr/local/lib/libGL.so and GLVND libraries for OpenGL and GLX: OPENGL_opengl_LIBRARY: /usr/local/lib/libOpenGL.so OPENGL_glx_LIBRARY: /usr/local/lib/libGLX.so OpenGL_GL_PREFERENCE has not been set to "GLVND" or "LEGACY", so for compatibility with CMake 3.10 and below the legacy GL library will be used. Call Stack (most recent call first): avogadro/qtplugins/overlayaxes/CMakeLists.txt:3 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_COLOR_MAKEFILE CMAKE_CXX_FLAGS_DEBUG CMAKE_C_FLAGS_DEBUG CMAKE_MODULE_LINKER_FLAGS CMAKE_VERBOSE_MAKEFILE -- Build files have been written to: /wrkdirs/usr/ports/science/avogadrolibs/work/.build =========================================================================== =======================<phase: build >============================ ===> Building for avogadrolibs-1.94.0_2 [ 0% 1/516] /nxb-bin/usr/bin/cc -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0 -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -MD -MT thirdparty/struct/CMakeFiles/struct.dir/struct_endian.c.o -MF thirdparty/struct/CMakeFiles/struct.dir/struct_endian.c.o.d -o 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avogadro/core/CMakeFiles/AvogadroCore.dir/cube.cpp.o.d -o avogadro/core/CMakeFiles/AvogadroCore.dir/cube.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/core/cube.cpp [ 1% 9/516] /nxb-bin/usr/bin/c++ -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0 -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/thirdparty/pugixml -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT utilities/bodr/CMakeFiles/bodrparse.dir/bodrparse.cxx.o -MF utilities/bodr/CMakeFiles/bodrparse.dir/bodrparse.cxx.o.d -o utilities/bodr/CMakeFiles/bodrparse.dir/bodrparse.cxx.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/utilities/bodr/bodrparse.cxx [ 1% 10/516] : && /nxb-bin/usr/bin/c++ -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fstack-protector-strong utilities/bodr/CMakeFiles/bodrparse.dir/bodrparse.cxx.o -o bin/bodrparse && : [ 2% 11/516] /nxb-bin/usr/bin/c++ -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0 -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT utilities/encodefile/CMakeFiles/encodefile.dir/encodefile.cxx.o -MF utilities/encodefile/CMakeFiles/encodefile.dir/encodefile.cxx.o.d -o utilities/encodefile/CMakeFiles/encodefile.dir/encodefile.cxx.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/utilities/encodefile/encodefile.cxx [ 2% 12/516] : && /nxb-bin/usr/bin/c++ -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fstack-protector-strong utilities/encodefile/CMakeFiles/encodefile.dir/encodefile.cxx.o -o bin/encodefile && : [ 2% 13/516] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/rendering && /wrkdirs/usr/ports/science/avogadrolibs/work/.build/bin/encodefile /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/rendering/arrow_vs.glsl /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/rendering/arrow_vs.h arrow_vs [ 2% 14/516] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/rendering && /wrkdirs/usr/ports/science/avogadrolibs/work/.build/bin/encodefile /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/rendering/cylinders_fs.glsl /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/rendering/cylinders_fs.h cylinders_fs [ 2% 15/516] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/rendering && /wrkdirs/usr/ports/science/avogadrolibs/work/.build/bin/encodefile /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/rendering/cylinders_vs.glsl /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/rendering/cylinders_vs.h cylinders_vs [ 3% 16/516] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/rendering && /wrkdirs/usr/ports/science/avogadrolibs/work/.build/bin/encodefile /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/rendering/linestrip_fs.glsl /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/rendering/linestrip_fs.h linestrip_fs [ 3% 17/516] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/rendering && /wrkdirs/usr/ports/science/avogadrolibs/work/.build/bin/encodefile /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/rendering/spheres_vs.glsl /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/rendering/spheres_vs.h spheres_vs [ 3% 18/516] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/rendering && /wrkdirs/usr/ports/science/avogadrolibs/work/.build/bin/encodefile /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/rendering/sphere_ao_depth_vs.glsl /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/rendering/sphere_ao_depth_vs.h sphere_ao_depth_vs [ 3% 19/516] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/rendering && /wrkdirs/usr/ports/science/avogadrolibs/work/.build/bin/encodefile /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/rendering/mesh_fs.glsl /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/rendering/mesh_fs.h mesh_fs [ 3% 20/516] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/rendering && /wrkdirs/usr/ports/science/avogadrolibs/work/.build/bin/encodefile /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/rendering/mesh_vs.glsl /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/rendering/mesh_vs.h mesh_vs [ 4% 21/516] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/rendering && /wrkdirs/usr/ports/science/avogadrolibs/work/.build/bin/encodefile /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/rendering/spheres_fs.glsl /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/rendering/spheres_fs.h spheres_fs [ 4% 22/516] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/rendering && /wrkdirs/usr/ports/science/avogadrolibs/work/.build/bin/encodefile /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/rendering/sphere_ao_depth_fs.glsl /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/rendering/sphere_ao_depth_fs.h sphere_ao_depth_fs [ 4% 23/516] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/rendering && /wrkdirs/usr/ports/science/avogadrolibs/work/.build/bin/encodefile /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/rendering/sphere_ao_bake_vs.glsl /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/rendering/sphere_ao_bake_vs.h sphere_ao_bake_vs [ 4% 24/516] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/rendering && /wrkdirs/usr/ports/science/avogadrolibs/work/.build/bin/encodefile /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/rendering/sphere_ao_bake_fs.glsl /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/rendering/sphere_ao_bake_fs.h sphere_ao_bake_fs [ 4% 25/516] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/rendering && /wrkdirs/usr/ports/science/avogadrolibs/work/.build/bin/encodefile /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/rendering/sphere_ao_render_vs.glsl /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/rendering/sphere_ao_render_vs.h sphere_ao_render_vs [ 5% 26/516] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/rendering && /wrkdirs/usr/ports/science/avogadrolibs/work/.build/bin/encodefile /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/rendering/sphere_ao_render_fs.glsl /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/rendering/sphere_ao_render_fs.h sphere_ao_render_fs [ 5% 27/516] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/rendering && 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-isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT utilities/resdata/CMakeFiles/resdataparse.dir/resdataparse.cxx.o -MF utilities/resdata/CMakeFiles/resdataparse.dir/resdataparse.cxx.o.d -o utilities/resdata/CMakeFiles/resdataparse.dir/resdataparse.cxx.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/utilities/resdata/resdataparse.cxx [ 5% 30/516] : && /nxb-bin/usr/bin/c++ -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fstack-protector-strong utilities/resdata/CMakeFiles/resdataparse.dir/resdataparse.cxx.o -o bin/resdataparse && : [ 6% 31/516] /nxb-bin/usr/bin/cc -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0 -O2 -pipe -fstack-protector-strong -isystem /usr/local/include 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-I/wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/io -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/quantumio -isystem /usr/local/include/eigen3 -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/thirdparty -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/quantumio/CMakeFiles/AvogadroQuantumIO.dir/nwchemlog.cpp.o -MF avogadro/quantumio/CMakeFiles/AvogadroQuantumIO.dir/nwchemlog.cpp.o.d -o avogadro/quantumio/CMakeFiles/AvogadroQuant umIO.dir/nwchemlog.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/quantumio/nwchemlog.cpp [ 11% 60/516] /nxb-bin/usr/bin/c++ -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build 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-I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0 -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/core -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/io -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/quantumio -isystem /usr/local/include/eigen3 -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/command/CMakeFiles/avobabel.dir/avobabel.cpp.o -MF avogadro/command/CMakeFiles/avobabel.dir/avobabel.cpp.o.d -o avogadro/command/CMakeFiles/avobabel.dir/avobabel.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/command/avobabel.cpp [ 12% 62/516] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/rendering && /wrkdirs/usr/ports/science/avogadrolibs/work/.build/bin/encodefile /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/rendering/linestrip_vs.glsl /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/rendering/linestrip_vs.h linestrip_vs [ 12% 63/516] /nxb-bin/usr/bin/c++ -DAvogadroRendering_EXPORTS -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0 -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/core -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/io -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/quantumio -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/rendering -isystem /usr/local/include/eigen3 -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/rendering/CMakeFiles/AvogadroRendering.dir/arrowgeometry.cpp.o -MF avogadro/rendering/CMakeFiles/AvogadroRendering.dir/arrowgeometry.cpp.o.d -o avogadro/rendering/CMakeFiles/AvogadroRendering .dir/arrowgeometry.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/rendering/arrowgeometry.cpp In file included from /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/rendering/arrowgeometry.cpp:17: /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/rendering/arrowgeometry.h:54:8: warning: 'render' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void render(const Camera& camera); ^ /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/rendering/drawable.h:94:16: note: overridden virtual function is here virtual void render(const Camera& camera); ^ In file included from /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/rendering/arrowgeometry.cpp:17: /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/rendering/arrowgeometry.h:59:8: warning: 'clear' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void clear(); ^ /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/rendering/drawable.h:124:16: note: overridden virtual function is here virtual void clear(); ^ 2 warnings generated. 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-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/rendering/CMakeFiles/AvogadroRendering.dir/drawable.cpp.o -MF avogadro/rendering/CMakeFiles/AvogadroRendering.dir/drawable.cpp.o.d -o avogadro/rendering/CMakeFiles/AvogadroRendering.dir/drawa ble.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/rendering/drawable.cpp [ 13% 68/516] /nxb-bin/usr/bin/c++ -DAvogadroRendering_EXPORTS -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0 -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/core -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/io -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/quantumio -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/rendering -isystem /usr/local/include/eigen3 -O2 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-I/wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/io -isystem /usr/local/include/eigen3 -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/thirdparty/pugixml -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/thirdparty/struct -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/thirdparty -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/io/CMakeFiles/AvogadroIO.dir/fileformatmanager.cpp.o -MF av ogadro/io/CMakeFiles/AvogadroIO.dir/fileformatmanager.cpp.o.d -o avogadro/io/CMakeFiles/AvogadroIO.dir/fileformatmanager.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/io/fileformatmanager.cpp In file included from /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/io/fileformatmanager.cpp:29: /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/io/vaspformat.h:90:8: warning: 'read' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] bool read(std::istream& inStream, Core::Molecule& mol); ^ /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/io/fileformat.h:126:16: note: overridden virtual function is here virtual bool read(std::istream& in, Core::Molecule& molecule) = 0; ^ In file included from /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/io/fileformatmanager.cpp:29: /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/io/vaspformat.h:91:8: warning: 'write' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] bool write(std::ostream& outStream, const Core::Molecule& mol); ^ /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/io/fileformat.h:134:16: note: overridden virtual function is here virtual bool write(std::ostream& out, const Core::Molecule& molecule) = 0; ^ 2 warnings generated. [ 19% 99/516] /nxb-bin/usr/bin/c++ -DAVO_USE_MMTF -DAvogadroIO_EXPORTS -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0 -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/core -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/io -isystem /usr/local/include/eigen3 -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/thirdparty/pugixml -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/thirdparty/struct -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/thirdparty -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/io/CMakeFiles/AvogadroIO.dir/gromacsformat.cpp.o -MF avogad ro/io/CMakeFiles/AvogadroIO.dir/gromacsformat.cpp.o.d -o avogadro/io/CMakeFiles/AvogadroIO.dir/gromacsformat.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/io/gromacsformat.cpp [ 19% 100/516] /nxb-bin/usr/bin/c++ -DAVO_USE_MMTF -DAvogadroIO_EXPORTS -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0 -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/core -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/io -isystem /usr/local/include/eigen3 -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/thirdparty/pugixml -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/thirdparty/struct -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/thirdparty -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/io/CMakeFiles/AvogadroIO.dir/mdlformat.cpp.o -MF avogadro/ io/CMakeFiles/AvogadroIO.dir/mdlformat.cpp.o.d -o avogadro/io/CMakeFiles/AvogadroIO.dir/mdlformat.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/io/mdlformat.cpp [ 19% 101/516] /nxb-bin/usr/bin/c++ -DAVO_USE_MMTF -DAvogadroIO_EXPORTS -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0 -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/core -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/io -isystem /usr/local/include/eigen3 -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/thirdparty/pugixml -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/thirdparty/struct -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/thirdparty -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/io/CMakeFiles/AvogadroIO.dir/vaspformat.cpp.o -MF avogadro /io/CMakeFiles/AvogadroIO.dir/vaspformat.cpp.o.d -o avogadro/io/CMakeFiles/AvogadroIO.dir/vaspformat.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/io/vaspformat.cpp In file included from /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/io/vaspformat.cpp:17: /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/io/vaspformat.h:90:8: warning: 'read' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] bool read(std::istream& inStream, Core::Molecule& mol); ^ /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/io/fileformat.h:126:16: note: overridden virtual function is here virtual bool read(std::istream& in, Core::Molecule& molecule) = 0; ^ In file included from /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/io/vaspformat.cpp:17: /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/io/vaspformat.h:91:8: warning: 'write' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] bool write(std::ostream& outStream, const Core::Molecule& mol); ^ /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/io/fileformat.h:134:16: note: overridden virtual function is here virtual bool write(std::ostream& out, const Core::Molecule& molecule) = 0; ^ 2 warnings generated. [ 19% 102/516] /nxb-bin/usr/bin/c++ -DAVO_USE_MMTF -DAvogadroIO_EXPORTS -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0 -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/core -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/io -isystem /usr/local/include/eigen3 -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/thirdparty/pugixml -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/thirdparty/struct -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/thirdparty -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/io/CMakeFiles/AvogadroIO.dir/pdbformat.cpp.o -MF avogadro/ io/CMakeFiles/AvogadroIO.dir/pdbformat.cpp.o.d -o avogadro/io/CMakeFiles/AvogadroIO.dir/pdbformat.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/io/pdbformat.cpp [ 19% 103/516] /nxb-bin/usr/bin/c++ -DAVO_USE_MMTF -DAvogadroIO_EXPORTS -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0 -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/core -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/io -isystem /usr/local/include/eigen3 -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/thirdparty/pugixml -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/thirdparty/struct -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/thirdparty -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/io/CMakeFiles/AvogadroIO.dir/xyzformat.cpp.o -MF avogadro/ io/CMakeFiles/AvogadroIO.dir/xyzformat.cpp.o.d -o avogadro/io/CMakeFiles/AvogadroIO.dir/xyzformat.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/io/xyzformat.cpp [ 20% 104/516] /nxb-bin/usr/bin/c++ -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0 -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/core -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/io -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/quantumio -isystem /usr/local/include/eigen3 -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/command/CMakeFiles/avocjsontocml.dir/cjsontocml.cpp.o -MF avogadro/command/CMakeFiles/avocjsontocml.dir/cjsontocml.cpp.o.d -o avogadro/command/CMakeFiles/avocjsontocml.dir/cjsontocml.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/command/cjsontocml.cpp [ 20% 105/516] /nxb-bin/usr/bin/c++ -DAVO_USE_MMTF -DAvogadroIO_EXPORTS -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0 -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/core -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/io -isystem /usr/local/include/eigen3 -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/thirdparty/pugixml -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/thirdparty/struct -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/thirdparty -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/io/CMakeFiles/AvogadroIO.dir/trrformat.cpp.o -MF avogadro/ io/CMakeFiles/AvogadroIO.dir/trrformat.cpp.o.d -o avogadro/io/CMakeFiles/AvogadroIO.dir/trrformat.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/io/trrformat.cpp [ 20% 106/516] /nxb-bin/usr/bin/c++ -DAVO_USE_MMTF -DAvogadroIO_EXPORTS -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0 -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/core -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/io -isystem /usr/local/include/eigen3 -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/thirdparty/pugixml -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/thirdparty/struct -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/thirdparty -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/io/CMakeFiles/AvogadroIO.dir/lammpsformat.cpp.o -MF avogad ro/io/CMakeFiles/AvogadroIO.dir/lammpsformat.cpp.o.d -o avogadro/io/CMakeFiles/AvogadroIO.dir/lammpsformat.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/io/lammpsformat.cpp [ 20% 107/516] /nxb-bin/usr/bin/c++ -DAVO_USE_MMTF -DAvogadroIO_EXPORTS -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0 -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/core -I/wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/io -isystem /usr/local/include/eigen3 -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/thirdparty/pugixml -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/thirdparty/struct -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/thirdparty -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/io/CMakeFiles/AvogadroIO.dir/mmtfformat.cpp.o -MF avogadro /io/CMakeFiles/AvogadroIO.dir/mmtfformat.cpp.o.d -o avogadro/io/CMakeFiles/AvogadroIO.dir/mmtfformat.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.94.0/avogadro/io/mmtfformat.cpp [ 20% 108/516] : && /nxb-bin/usr/bin/c++ -fPIC -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fstack-protector-strong -shared -Wl,-soname,libAvogadroIO.so.1 -o lib/libAvogadroIO.so.1.94.0 avogadro/io/CMakeFiles/AvogadroIO.dir/cjsonformat.cpp.o avogadro/io/CMakeFiles/AvogadroIO.dir/cmlformat.cpp.o avogadro/io/CMakeFiles/AvogadroIO.dir/dcdformat.cpp.o avogadro/io/CMakeFiles/AvogadroIO.dir/fileformat.cpp.o avogadro/io/CMakeFiles/AvogadroIO.dir/fileformatmanager.cpp.o avogadro/io/CMakeFiles/AvogadroIO.dir/gromacsformat.cpp.o avogadro/io/CMakeFiles/AvogadroIO.dir/mdlformat.cpp.o avogadro/io/CMakeFiles/AvogadroIO.dir/vaspformat.cpp.o avogadro/io/CMakeFiles/AvogadroIO.dir/pdbformat.cpp.o avogadro/io/CMakeFiles/AvogadroIO.dir/xyzformat.cpp.o avogadro/io/CMakeFiles/AvogadroIO.dir/trrformat.cpp.o avogadro/io/CMakeFi les/AvogadroIO.dir/lammpsformat.cpp.o avogadro/io/CMakeFiles/AvogadroIO.dir/mmtfformat.cpp.o -Wl,-rpath,/wrkdirs/usr/ports/science/avogadrolibs/work/.build/lib: lib/libAvogadroCore.so.1.94.0 thirdparty/struct/libstruct.a && : [ 21% 109/516] /usr/local/bin/cmake -E cmake_symlink_library lib/libAvogadroIO.so.1.94.0 lib/libAvogadroIO.so.1 lib/libAvogadroIO.so && : =>> Killing runaway build after 21600 seconds with no output
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