Date: Mon, 14 Feb 2005 12:58:09 -0800 From: "Kevin Oberman" <oberman@es.net> To: Joe Marcus Clarke <marcus@FreeBSD.org> Cc: gnome@FreeBSD.org Subject: Re: gedit and scrollkeeper problems on 4.11 system Message-ID: <20050214205809.58CDE5D07@ptavv.es.net> In-Reply-To: Your message of "Mon, 14 Feb 2005 15:25:02 EST." <4211091E.7080303@FreeBSD.org>
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> Date: Mon, 14 Feb 2005 15:25:02 -0500 > From: Joe Marcus Clarke <marcus@FreeBSD.org> > > -----BEGIN PGP SIGNED MESSAGE----- > Hash: SHA1 > > Kevin Oberman wrote: > |>Date: Mon, 14 Feb 2005 15:16:16 -0500 > |>From: Joe Marcus Clarke <marcus@FreeBSD.org> > |> > |>-----BEGIN PGP SIGNED MESSAGE----- > |>Hash: SHA1 > |> > |>Kevin Oberman wrote: > |>|>Date: Mon, 14 Feb 2005 13:08:10 -0500 > |>|>From: Joe Marcus Clarke <marcus@FreeBSD.org> > |>|> > |>|>-----BEGIN PGP SIGNED MESSAGE----- > |>|>Hash: SHA1 > |>|> > |>|>Kevin Oberman wrote: > |>|>| I am unable to update gedit and seem to have messed up scrollkeeper. > |>|>| > |>|>| The system is running 4.11-stable and all ports are updated > regularly. I > |>|>| have tried updating to gedit-2.8.2_1 to 2.8.3 and failed to get it to > |>|>| install properly. > |>|>| > |>|>| The first issue is that in help/C has: > |>|>| for file in gedit-C.omf; do \ > |>|>| install -c -o root -g wheel -m 444 $file.out > |>|>/usr/X11R6/share/gnome/omf/gedit/$file; \ > |>|>| done > |>|>| > |>|>| While gedit-C.omf is there, I don't have a gedit-C.omf.out, so the > |>|>| script fails. portupgrade then starts re-installing the old > |>|>| version. Then the REALLY scarry thing happens: > |>|>| ---> Restoring the old version > |>|>| update-desktop-database: not found > |>|>| Segmentation fault (core dumped) > |>|>| Segmentation fault (core dumped) > |>|>| Segmentation fault (core dumped) > |>|>| Segmentation fault (core dumped) > |>|>| Segmentation fault (core dumped) > |>|>| Segmentation fault (core dumped) > |>|>| Segmentation fault (core dumped) > |>|>| Segmentation fault (core dumped) > |>|>| Segmentation fault (core dumped) > |>|>| Segmentation fault (core dumped) > |>|>| Segmentation fault (core dumped) > |>|>| Segmentation fault (core dumped) > |>|>| Segmentation fault (core dumped) > |>|>| Segmentation fault (core dumped) > |>|>| > |>|>| All of the segmentation faults are in scrollkeeper. This is where I > |>|>| really get worried. I really don't want to re-install all of Gnome, > |>|>| especially when 2.10 is so close and that will force a complete Gnome > |>|>| rebuild. > |>|>| > |>|>| Any ideas what went wrong here? > |>|> > |>|>Good be a problem with your libxslt installation. IT may also be a > |>|>problem with scrollkeeper itself. What happens if you rebuild both of > |>|>those ports? > |>| > |>| > |>| Well, it's a bit deeper down the tree than that. I re-installed libxslt, > |>| but scrollkeeper fails to configure as it can't find its DTD. I'm still > |>| trying to figure out what I need to install to fix that. I've tried all > |>| of the docbook ports as well as sdocbook-xml, p5-XML-Parse, and > |>| xmlcatmgr. Still no joy. :-( > |>| > |>| Any idea how to get the DTD back or am I facing a major re-install of > |>| the whole thing? > |> > |>Which DTD is missing? > | > | > | Joe, > | Sorry. I need to learn to read. It was not missing a DTD, but xmlcatmgr > | was segfaulting when attempting to get the DTD. > | checking for DocBook XML DTD... Segmentation fault (core dumped) > | Segmentation fault (core dumped) > | configure: error: not found. Make sure you have the DocBook DTD > installed and ensure that it is registered in /usr/local/share/xml/catalog. > | ===> Script "configure" failed unexpectedly. > | Please direct the output of the failure of the make command to a file, and > | then feed that file to the gnomelogalyzer, available from > | http://www.freebsd.org/gnome/gnomelogalyzer.sh, which will diagnose > the problem > | and suggest a solution. If - and only if - the gnomelogalyzer cannot > solve > | the problem, report the problem to the FreeBSD GNOME team at > gnome@FreeBSD.org, > | and attach > | "/usr/ports/textproc/scrollkeeper/work/scrollkeeper-0.3.14/config.log" and > | the output of the failure of the make command. Also, it might be a > good idea > | to provide an overview of all packages installed on your system (e.g. > an `ls > | /var/db/pkg`). > | > | But why the heck s it failing? I'm baffled, but suspect it's something > | in some library. Maybe I need to rebuild expat? (I really don't > | understand what is going on and am probably flailing away more than > | anything else.) > > The command use to check for the DTD is xmlcatalog which is installed by > libxml2. You could try reinstalling that as well reinstalling docbook-sk. Bingo! libxml2 is the culprit. I'd love to know what happened to it, but it is scrollkeeper configures fine, now, but I am still afraid something is wrong. I got the following on the install of scrollkeeper, which bothers me: /local/sbin:/usr/local/bin:/usr/X11R6/bin:/root/bin:/usr/X11R6/bin" ; \ /usr/X11R6/bin/scrollkeeper-rebuilddb -q -p /var/db/scrollkeeper I/O error : Attempt to load network entity http://www.oasis-open.org/docbook/xml/4.2/docbookx.dtd /usr/X11R6/share/gnome/help/gnotime/C/gnotime.xml:344: parser error : Entity 'mdash' not defined — New Project ^ /usr/X11R6/share/gnome/help/gnotime/C/gnotime.xml:357: parser error : Entity 'mdash' not defined <guimenuitem> — Reload Configuration File</guimenuitem ^ These continue, mostly for &emdash, but also for &percent, so I suspect something is still wrong. :-( I think I'm going to punt and do "portupgrade -Rfx xorg-libraries" on scrollkeeper. Not too long a list of dependencies. :-( -- R. Kevin Oberman, Network Engineer Energy Sciences Network (ESnet) Ernest O. Lawrence Berkeley National Laboratory (Berkeley Lab) E-mail: oberman@es.net Phone: +1 510 486-8634
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