Date: Tue, 19 Dec 2017 01:10:40 GMT From: pkg-fallout@FreeBSD.org To: tota@FreeBSD.org Cc: pkg-fallout@FreeBSD.org Subject: [package - 111amd64-quarterly][math/R-cran-KFAS] Failed for R-cran-KFAS-1.2.9 in stage Message-ID: <201712190110.vBJ1Ae4k089558@beefy3.nyi.freebsd.org>
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You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: tota@FreeBSD.org Last committer: tota@FreeBSD.org Ident: $FreeBSD: branches/2017Q4/math/R-cran-KFAS/Makefile 449280 2017-09-05 10:04:16Z tota $ Log URL: http://beefy3.nyi.freebsd.org/data/111amd64-quarterly/456686/logs/R-cran-KFAS-1.2.9.log Build URL: http://beefy3.nyi.freebsd.org/build.html?mastername=111amd64-quarterly&build=456686 Log: =>> Building math/R-cran-KFAS build started at Tue Dec 19 01:09:09 UTC 2017 port directory: /usr/ports/math/R-cran-KFAS package name: R-cran-KFAS-1.2.9 building for: FreeBSD 111amd64-quarterly-job-05 11.1-RELEASE-p6 FreeBSD 11.1-RELEASE-p6 amd64 maintained by: tota@FreeBSD.org Makefile ident: $FreeBSD: branches/2017Q4/math/R-cran-KFAS/Makefile 449280 2017-09-05 10:04:16Z tota $ Poudriere version: 3.2.3-16-g77e43413 Host OSVERSION: 1200052 Jail OSVERSION: 1101001 Job Id: 05 ---Begin Environment--- SHELL=/bin/csh OSVERSION=1101001 UNAME_v=FreeBSD 11.1-RELEASE-p6 UNAME_r=11.1-RELEASE-p6 BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 SAVED_TERM= MASTERMNT=/usr/local/poudriere/data/.m/111amd64-quarterly/ref PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin POUDRIERE_BUILD_TYPE=bulk OLDPWD=/usr/local/poudriere/data/.m/111amd64-quarterly/ref/.p P_PORTS_FEATURES=DEPENDS_ARGS SELECTED_OPTIONS PWD=/usr/local/poudriere/data/.m/111amd64-quarterly/ref/.p/pool MASTERNAME=111amd64-quarterly SCRIPTPREFIX=/usr/local/share/poudriere USER=root HOME=/root P_PYTHON_MAJOR_VER=2 POUDRIERE_VERSION=3.2.3-16-g77e43413 SCRIPTPATH=/usr/local/share/poudriere/bulk.sh LIBEXECPREFIX=/usr/local/libexec/poudriere LOCALBASE=/usr/local POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- tota@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- F77="gfortran6" FC="gfortran6" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc6" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc6" XDG_DATA_HOME=/wrkdirs/usr/ports/math/R-cran-KFAS/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/R-cran-KFAS/work HOME=/wrkdirs/usr/ports/math/R-cran-KFAS/work TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- F77="gfortran6" FC="gfortran6" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc6" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc6" XDG_DATA_HOME=/wrkdirs/usr/ports/math/R-cran-KFAS/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/R-cran-KFAS/work HOME=/wrkdirs/usr/ports/math/R-cran-KFAS/work TMPDIR="/tmp" NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" CC="cc" CFLAGS="-O2 -pipe -fstack-protector -fno-strict-aliasing" CPP="cpp" CPPFLAGS="" LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6 -B/usr/local/bin -fstack-protector" L IBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- R_MOD_DIR=lib/R/library/KFAS OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local PORTDOCS="" PORTEXAMPLES="" LIB32DIR=lib DOCSDIR="share/doc/KFAS" EXAMPLESDIR="share/examples/KFAS" DATADIR="share/KFAS" WWWDIR="www/KFAS" ETCDIR="etc/KFAS" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/KFAS DOCSDIR=/usr/local/share/doc/KFAS EXAMPLESDIR=/usr/local/share/examples/KFAS WWWDIR=/usr/local/www/KFAS ETCDIR=/usr/local/etc/KFAS --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 #### /usr/ports/Mk/Scripts/ports_env.sh #### ARCH=amd64 CONFIGURE_MAX_CMD_LEN=262144 HAVE_COMPAT_IA32_KERN=YES OPSYS=FreeBSD OSREL=11.1 OSVERSION=1101001 PYTHONBASE=/usr/local UID=0 _JAVA_OS_LIST_REGEXP=native|linux _JAVA_VENDOR_LIST_REGEXP=openjdk|oracle|sun _JAVA_VERSION_LIST_REGEXP=1.6|1.7|1.8|1.6\+|1.7\+|1.8\+ _OSRELEASE=11.1-RELEASE-p6 #### Misc Poudriere #### GID=0 DISABLE_MAKE_JOBS=poudriere ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===> License GPLv2+ accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===> R-cran-KFAS-1.2.9 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.10.1.txz [111amd64-quarterly-job-05] Installing pkg-1.10.1... [111amd64-quarterly-job-05] Extracting pkg-1.10.1: .......... done ===> R-cran-KFAS-1.2.9 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of R-cran-KFAS-1.2.9 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> License GPLv2+ accepted by the user ===> Fetching all distfiles required by R-cran-KFAS-1.2.9 for building =========================================================================== =======================<phase: checksum >============================ ===> License GPLv2+ accepted by the user ===> Fetching all distfiles required by R-cran-KFAS-1.2.9 for building => SHA256 Checksum OK for KFAS_1.2.9.tar.gz. =========================================================================== =======================<phase: extract-depends>============================ =========================================================================== =======================<phase: extract >============================ ===> License GPLv2+ accepted by the user ===> Fetching all distfiles required by R-cran-KFAS-1.2.9 for building ===> Extracting for R-cran-KFAS-1.2.9 => SHA256 Checksum OK for KFAS_1.2.9.tar.gz. =========================================================================== =======================<phase: patch-depends >============================ =========================================================================== =======================<phase: patch >============================ ===> Patching for R-cran-KFAS-1.2.9 =========================================================================== =======================<phase: build-depends >============================ ===> R-cran-KFAS-1.2.9 depends on file: /usr/local/bin/R - not found ===> Installing existing package /packages/All/R-3.4.2.txz [111amd64-quarterly-job-05] Installing R-3.4.2... [111amd64-quarterly-job-05] `-- Installing cairo-1.14.8_1,2... [111amd64-quarterly-job-05] | `-- Installing dri2proto-2.8... [111amd64-quarterly-job-05] | `-- Extracting dri2proto-2.8: .... done [111amd64-quarterly-job-05] | `-- Installing fontconfig-2.12.1,1... [111amd64-quarterly-job-05] | | `-- Installing expat-2.2.1... [111amd64-quarterly-job-05] | | `-- Extracting expat-2.2.1: .......... done [111amd64-quarterly-job-05] | | `-- Installing freetype2-2.8... [111amd64-quarterly-job-05] | | `-- Extracting freetype2-2.8: .......... done [111amd64-quarterly-job-05] | `-- Extracting fontconfig-2.12.1,1: .......... done Running fc-cache to build fontconfig cache... /usr/local/share/fonts: skipping, no such directory /usr/local/lib/X11/fonts: skipping, no such directory /var/db/fontconfig: cleaning cache directory fc-cache: succeeded [111amd64-quarterly-job-05] | `-- Installing gettext-runtime-0.19.8.1_1... [111amd64-quarterly-job-05] | | `-- Installing indexinfo-0.2.6... [111amd64-quarterly-job-05] | | `-- Extracting indexinfo-0.2.6: .... done [111amd64-quarterly-job-05] | `-- Extracting gettext-runtime-0.19.8.1_1: .......... done [111amd64-quarterly-job-05] | `-- Installing glib-2.50.2_6,1... [111amd64-quarterly-job-05] | | `-- Installing libffi-3.2.1_1... [111amd64-quarterly-job-05] | | `-- Extracting libffi-3.2.1_1: .......... done [111amd64-quarterly-job-05] | | `-- Installing libiconv-1.14_11... [111amd64-quarterly-job-05] | | `-- Extracting libiconv-1.14_11: .......... done [111amd64-quarterly-job-05] | | `-- Installing pcre-8.40_1... [111amd64-quarterly-job-05] | | `-- Extracting pcre-8.40_1: .......... done [111amd64-quarterly-job-05] | | `-- Installing perl5-5.24.3... [111amd64-quarterly-job-05] | | `-- Extracting perl5-5.24.3: .......... done [111amd64-quarterly-job-05] | | `-- Installing python27-2.7.14... [111amd64-quarterly-job-05] | | `-- Installing readline-7.0.3... [111amd64-quarterly-job-05] | | `-- Extracting readline-7.0.3: .......... done [111amd64-quarterly-job-05] | | `-- Extracting python27-2.7.14: .......... done [111amd64-quarterly-job-05] | `-- Extracting glib-2.50.2_6,1: .......... done No schema files found: doing nothing. [111amd64-quarterly-job-05] | `-- Installing glproto-1.4.17... [111amd64-quarterly-job-05] | `-- Extracting glproto-1.4.17: ...... done <snip> clang-4.0: warning: -lflangrti: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lompstub: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lexecinfo: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: argument unused during compilation: '-L/usr/local/flang/lib' [-Wunused-command-line-argument] cc -I/usr/local/lib/R/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector -isystem /usr/local/include -fno-strict-aliasing -c cdistwrap.c -o cdistwrap.o flang -g -c covmeanw.f95 -o covmeanw.o clang-4.0: warning: -lflang: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangmain: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangrti: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lompstub: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lexecinfo: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: argument unused during compilation: '-L/usr/local/flang/lib' [-Wunused-command-line-argument] flang -g -c filter1step.f95 -o filter1step.o clang-4.0: warning: -lflang: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangmain: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangrti: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lompstub: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lexecinfo: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: argument unused during compilation: '-L/usr/local/flang/lib' [-Wunused-command-line-argument] flang -g -c filter1stepnovar.f95 -o filter1stepnovar.o clang-4.0: warning: -lflang: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangmain: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangrti: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lompstub: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lexecinfo: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: argument unused during compilation: '-L/usr/local/flang/lib' [-Wunused-command-line-argument] flang -g -c filtersimfast.f95 -o filtersimfast.o clang-4.0: warning: -lflang: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangmain: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangrti: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lompstub: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lexecinfo: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: argument unused during compilation: '-L/usr/local/flang/lib' [-Wunused-command-line-argument] flang -g -c gloglik.f95 -o gloglik.o clang-4.0: warning: -lflang: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangmain: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangrti: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lompstub: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lexecinfo: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: argument unused during compilation: '-L/usr/local/flang/lib' [-Wunused-command-line-argument] flang -g -c gsmoothall.f95 -o gsmoothall.o clang-4.0: warning: -lflang: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangmain: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangrti: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lompstub: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lexecinfo: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: argument unused during compilation: '-L/usr/local/flang/lib' [-Wunused-command-line-argument] cc -I/usr/local/lib/R/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector -isystem /usr/local/include -fno-strict-aliasing -c init.c -o init.o flang -g -c isample.f95 -o isample.o clang-4.0: warning: -lflang: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangmain: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangrti: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lompstub: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lexecinfo: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: argument unused during compilation: '-L/usr/local/flang/lib' [-Wunused-command-line-argument] flang -g -c isamplefilter.f95 -o isamplefilter.o clang-4.0: warning: -lflang: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangmain: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangrti: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lompstub: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lexecinfo: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: argument unused during compilation: '-L/usr/local/flang/lib' [-Wunused-command-line-argument] flang -g -c kfilter.f95 -o kfilter.o clang-4.0: warning: -lflang: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangmain: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangrti: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lompstub: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lexecinfo: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: argument unused during compilation: '-L/usr/local/flang/lib' [-Wunused-command-line-argument] flang -g -c kfstheta.f95 -o kfstheta.o clang-4.0: warning: -lflang: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangmain: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangrti: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lompstub: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lexecinfo: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: argument unused during compilation: '-L/usr/local/flang/lib' [-Wunused-command-line-argument] flang -g -c ldl.f95 -o ldl.o clang-4.0: warning: -lflang: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangmain: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangrti: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lompstub: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lexecinfo: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: argument unused during compilation: '-L/usr/local/flang/lib' [-Wunused-command-line-argument] flang -g -c ldlssm.f95 -o ldlssm.o clang-4.0: warning: -lflang: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangmain: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangrti: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lompstub: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lexecinfo: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: argument unused during compilation: '-L/usr/local/flang/lib' [-Wunused-command-line-argument] flang -g -c marginalxx.f95 -o marginalxx.o clang-4.0: warning: -lflang: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangmain: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangrti: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lompstub: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lexecinfo: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: argument unused during compilation: '-L/usr/local/flang/lib' [-Wunused-command-line-argument] flang -g -c mvfilter.f95 -o mvfilter.o clang-4.0: warning: -lflang: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangmain: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangrti: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lompstub: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lexecinfo: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: argument unused during compilation: '-L/usr/local/flang/lib' [-Wunused-command-line-argument] flang -g -c ngfilter.f95 -o ngfilter.o clang-4.0: warning: -lflang: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangmain: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangrti: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lompstub: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lexecinfo: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: argument unused during compilation: '-L/usr/local/flang/lib' [-Wunused-command-line-argument] flang -g -c ngloglik.f95 -o ngloglik.o clang-4.0: warning: -lflang: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangmain: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangrti: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lompstub: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lexecinfo: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: argument unused during compilation: '-L/usr/local/flang/lib' [-Wunused-command-line-argument] flang -g -c ngsmooth.f95 -o ngsmooth.o clang-4.0: warning: -lflang: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangmain: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangrti: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lompstub: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lexecinfo: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: argument unused during compilation: '-L/usr/local/flang/lib' [-Wunused-command-line-argument] flang -g -c predict.f95 -o predict.o clang-4.0: warning: -lflang: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangmain: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangrti: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lompstub: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lexecinfo: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: argument unused during compilation: '-L/usr/local/flang/lib' [-Wunused-command-line-argument] flang -g -c ptheta.f95 -o ptheta.o clang-4.0: warning: -lflang: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangmain: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangrti: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lompstub: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lexecinfo: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: argument unused during compilation: '-L/usr/local/flang/lib' [-Wunused-command-line-argument] flang -g -c pytheta.f95 -o pytheta.o clang-4.0: warning: -lflang: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangmain: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangrti: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lompstub: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lexecinfo: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: argument unused during compilation: '-L/usr/local/flang/lib' [-Wunused-command-line-argument] flang -g -c simfilter.f95 -o simfilter.o clang-4.0: warning: -lflang: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangmain: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangrti: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lompstub: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lexecinfo: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: argument unused during compilation: '-L/usr/local/flang/lib' [-Wunused-command-line-argument] flang -g -c simgaussian.f95 -o simgaussian.o clang-4.0: warning: -lflang: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangmain: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangrti: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lompstub: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lexecinfo: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: argument unused during compilation: '-L/usr/local/flang/lib' [-Wunused-command-line-argument] flang -g -c simgaussianuncond.f95 -o simgaussianuncond.o clang-4.0: warning: -lflang: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangmain: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangrti: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lompstub: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lexecinfo: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: argument unused during compilation: '-L/usr/local/flang/lib' [-Wunused-command-line-argument] flang -g -c smoothonestep.f95 -o smoothonestep.o clang-4.0: warning: -lflang: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangmain: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangrti: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lompstub: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lexecinfo: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: argument unused during compilation: '-L/usr/local/flang/lib' [-Wunused-command-line-argument] flang -g -c smoothsim.f95 -o smoothsim.o clang-4.0: warning: -lflang: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangmain: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangrti: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lompstub: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lexecinfo: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: argument unused during compilation: '-L/usr/local/flang/lib' [-Wunused-command-line-argument] flang -g -c smoothsimfast.f95 -o smoothsimfast.o clang-4.0: warning: -lflang: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangmain: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lflangrti: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lompstub: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: -lexecinfo: 'linker' input unused [-Wunused-command-line-argument] clang-4.0: warning: argument unused during compilation: '-L/usr/local/flang/lib' [-Wunused-command-line-argument] flang -shared -L/usr/local/lib/R/lib -L/usr/local/flang/lib -lflang -lexecinfo -L/usr/local/lib -fstack-protector -o KFAS.so approx.o approxloop.o artransform.o cdistwrap.o covmeanw.o filter1step.o filter1stepnovar.o filtersimfast.o gloglik.o gsmoothall.o init.o isample.o isamplefilter.o kfilter.o kfstheta.o ldl.o ldlssm.o marginalxx.o mvfilter.o ngfilter.o ngloglik.o ngsmooth.o predict.o ptheta.o pytheta.o simfilter.o simgaussian.o simgaussianuncond.o smoothonestep.o smoothsim.o smoothsimfast.o -L/usr/local/lib/R/lib -lRlapack -L/usr/local/lib/R/lib -lRblas -lflangmain -lflang -lflangrti -lompstub -lexecinfo -L/usr/local/lib/R/lib -lR /usr/bin/ld: filtersimfast.o: relocation R_X86_64_32 against `a local symbol' can not be used when making a shared object; recompile with -fPIC filtersimfast.o: could not read symbols: Bad value clang-4.0: error: linker command failed with exit code 1 (use -v to see invocation) gmake[1]: *** [/usr/local/lib/R/share/make/shlib.mk:6: KFAS.so] Error 1 gmake[1]: Leaving directory '/wrkdirs/usr/ports/math/R-cran-KFAS/work/KFAS/src' ERROR: compilation failed for package 'KFAS' * removing '/wrkdirs/usr/ports/math/R-cran-KFAS/work/stage/usr/local/lib/R/library/KFAS' *** Error code 1 Stop. make: stopped in /usr/ports/math/R-cran-KFAS
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