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Date:      Tue, 24 Apr 2012 03:08:57 +0600 (BDT)
From:      Muhammad Moinur Rahman <5u623l20@gmail.com>
To:        FreeBSD-gnats-submit@FreeBSD.org
Cc:        wen@FreeBSD.org
Subject:   ports/167251: [PATCH] biology/libsbml: update to 4.3.1
Message-ID:  <201204232108.q3NL8vFA057167@bofh.telnet.net.bd>
Resent-Message-ID: <201204232110.q3NLADNu009022@freefall.freebsd.org>

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>Number:         167251
>Category:       ports
>Synopsis:       [PATCH] biology/libsbml: update to 4.3.1
>Confidential:   no
>Severity:       non-critical
>Priority:       low
>Responsible:    freebsd-ports-bugs
>State:          open
>Quarter:        
>Keywords:       
>Date-Required:
>Class:          update
>Submitter-Id:   current-users
>Arrival-Date:   Mon Apr 23 21:10:12 UTC 2012
>Closed-Date:
>Last-Modified:
>Originator:     Muhammad Moinur Rahman
>Release:        FreeBSD 9.0-STABLE amd64
>Organization:
>Environment:
System: FreeBSD bofh.telnet.net.bd 9.0-STABLE FreeBSD 9.0-STABLE #0: Fri Mar  2 02:21:51 BDT
>Description:
- Update to 4.3.1

For Committer's reference:
http://tb.s.ubze.ro//logs/7.4-FreeBSD-i386/libsbml-4.3.1.log
http://tb.s.ubze.ro//logs/7.4-FreeBSD-amd64/libsbml-4.3.1.log
http://tb.s.ubze.ro//logs/8.2-FreeBSD-i386/libsbml-4.3.1.log
http://tb.s.ubze.ro//logs/8.2-FreeBSD-amd64/libsbml-4.3.1.log
http://tb.s.ubze.ro//logs/9.0-FreeBSD-i386/libsbml-4.3.1.log
http://tb.s.ubze.ro//logs/9.0-FreeBSD-amd64/libsbml-4.3.1.log

Port maintainer (wen@FreeBSD.org) is cc'd.

Generated with FreeBSD Port Tools 0.99_5 (mode: update, diff: ports)
>How-To-Repeat:
>Fix:

--- libsbml-4.3.1.patch begins here ---
diff -ruN --exclude=CVS /usr/ports/biology/libsbml/Makefile ./Makefile
--- /usr/ports/biology/libsbml/Makefile	2010-10-08 08:06:53.000000000 +0600
+++ ./Makefile	2012-04-24 02:47:44.284891756 +0600
@@ -6,11 +6,11 @@
 #
 
 PORTNAME=	libsbml
-PORTVERSION=	4.2.0
+PORTVERSION=	4.3.1
 CATEGORIES=	biology devel
 MASTER_SITES=	SF
 MASTER_SITE_SUBDIR=	sbml/${PORTNAME}/${PORTVERSION}
-DISTNAME=	${PORTNAME}-${PORTVERSION}-src
+DISTNAME=	libSBML-${PORTVERSION}-src
 
 MAINTAINER=	wen@FreeBSD.org
 COMMENT=	An API Library for Working with SBML File
@@ -21,7 +21,6 @@
 		RUBY "Support for Ruby" off
 
 USE_GMAKE=	yes
-USE_ZIP=	yes
 GNU_CONFIGURE=	yes
 USE_LDCONFIG=	yes
 WRKSRC=		${WRKDIR}/${PORTNAME}-${PORTVERSION}
diff -ruN --exclude=CVS /usr/ports/biology/libsbml/distinfo ./distinfo
--- /usr/ports/biology/libsbml/distinfo	2011-03-19 18:29:32.000000000 +0600
+++ ./distinfo	2012-04-24 02:47:46.982888568 +0600
@@ -1,2 +1,2 @@
-SHA256 (libsbml-4.2.0-src.zip) = 31f4c63adc2bdd2ef7093dc206b4eb940a0c9cc0b98366f27316635fc44472ba
-SIZE (libsbml-4.2.0-src.zip) = 9469890
+SHA256 (libSBML-4.3.1-src.tar.gz) = 0a75e3ad16075164c4fb0468ebd4b40d88e9226d030950d5340fe17499219195
+SIZE (libSBML-4.3.1-src.tar.gz) = 5926011
diff -ruN --exclude=CVS /usr/ports/biology/libsbml/pkg-plist ./pkg-plist
--- /usr/ports/biology/libsbml/pkg-plist	2010-10-08 08:06:53.000000000 +0600
+++ ./pkg-plist	2012-04-24 02:44:16.780898092 +0600
@@ -118,7 +118,7 @@
 include/sbml/xml/XMLToken.h
 include/sbml/xml/XMLTokenizer.h
 include/sbml/xml/XMLTriple.h
-lib/libsbml.so.6
+lib/libsbml.so.7
 lib/libsbml.so
 lib/libsbml.la
 lib/libsbml.a
--- libsbml-4.3.1.patch ends here ---

>Release-Note:
>Audit-Trail:
>Unformatted:



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