From nobody Sat Mar 16 13:31:47 2024 X-Original-To: dev-commits-ports-all@mlmmj.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mlmmj.nyi.freebsd.org (Postfix) with ESMTP id 4Txhq75BfXz5DqRD; Sat, 16 Mar 2024 13:31:47 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256 client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "R3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 4Txhq74ChGz41jP; Sat, 16 Mar 2024 13:31:47 +0000 (UTC) (envelope-from git@FreeBSD.org) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1710595907; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type: content-transfer-encoding:content-transfer-encoding; bh=sRvPaOOtPUjC+e4VOEde+N9WozPoxtxwhGoSY3YaDwM=; b=Zut4q1lkFhqwHOgaoAUlqaXNRhujTniGsLycqvOGrjVHBZJeHWEYFmBPaybbgI8nQj07s2 MCOw51z8lvWsEMc6kOONY/jmo6fFjNFWluVXQ/zFN2izFNF/OXAMdjPBpeRg6S1ZXGq3Oi IoMO9xv3XqzlKtMNs5W7iJA0aaT7X/ULS9CxAbcrLZKDCmHhkIgelvmdfrV4GqGc8wjDBj on7VZR9NwwMWwbp/d97u5L0nknb8/lsE/imFkwkyOk2Md6HsXObHdiMDpjPxm2B4FS654e bHzfdVTNJoet/7msEVAiiF1QV88NpjtymuOzmJhiP0UKcyOit6eDQaLZBcxVDw== ARC-Seal: i=1; s=dkim; d=freebsd.org; t=1710595907; a=rsa-sha256; cv=none; b=UfccpNe/3xqdMwf6OvlN8biX6s1GyDYFnvaj10h9ztllYQU7GhzdyzjhlecoTDWBNQddtm uZz2MGHn1v2PgZTBsJWEPYDknLMJYLmB1rM7/YyMlj4rt70fMZTJ+Tij9QifBZyVXRb4AX EZvqE00DHqI9hjiFbIQD9XXymeULx1aIEAoAqzsTEObyOrIPrANLTDKgXNFRvMUa1klQwz geDno/A7td6Pqg8Afvk/3H7nvM/pwpKAGDiTdnm+ZqERgJ7P6GVvHwLxvxRkX5CgpQxfjO mWwgJxoB3OL2hl/d/8GB0Z58yLxNknSXAkhzrdAmkLxu+AlyuKFc5aYl1LYeew== ARC-Authentication-Results: i=1; mx1.freebsd.org; none ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1710595907; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type: content-transfer-encoding:content-transfer-encoding; bh=sRvPaOOtPUjC+e4VOEde+N9WozPoxtxwhGoSY3YaDwM=; b=gu359briZqYLyThfS73WGGf7H4cr7WJaGL7pk0B0WiHr8vTxlqDZEndOVL/r7OE4hB+JeK DHoW6ph4RMuBtC2T5UKTGwPlpBmn8yjXrEPc7+15j08q0PSVP0Sh5fBySXsKfqbe2fI2WL RzKg7ABuSwQHqNRewkp7CoY6VSbm3+y5A1MLH5LiaqePw0+LXJ0b2VUWKNslC/796r95Zz /7TQ90NdL+vaNRFF0xkcWQvy/jjS0YIdY73FKvv+NKb0gGpcTN/I2EyOLGgKV+J4J9ACIW ob8uqUHE2r4DPMuG5iOQtiq549R3+E53LkAnnEk3sr7baSsaRd7SIEr2GYcR3w== Received: from gitrepo.freebsd.org (gitrepo.freebsd.org [IPv6:2610:1c1:1:6068::e6a:5]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id 4Txhq73qPSzxJs; Sat, 16 Mar 2024 13:31:47 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from gitrepo.freebsd.org ([127.0.1.44]) by gitrepo.freebsd.org (8.17.1/8.17.1) with ESMTP id 42GDVlXg088320; Sat, 16 Mar 2024 13:31:47 GMT (envelope-from git@gitrepo.freebsd.org) Received: (from git@localhost) by gitrepo.freebsd.org (8.17.1/8.17.1/Submit) id 42GDVlJu088317; Sat, 16 Mar 2024 13:31:47 GMT (envelope-from git) Date: Sat, 16 Mar 2024 13:31:47 GMT Message-Id: <202403161331.42GDVlJu088317@gitrepo.freebsd.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org From: "Jason W. Bacon" Subject: git: 43e4ca8d053f - main - py-cutadapt: Update to 4.7 List-Id: Commit messages for all branches of the ports repository List-Archive: https://lists.freebsd.org/archives/dev-commits-ports-all List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-dev-commits-ports-all@freebsd.org X-BeenThere: dev-commits-ports-all@freebsd.org MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 8bit X-Git-Committer: jwb X-Git-Repository: ports X-Git-Refname: refs/heads/main X-Git-Reftype: branch X-Git-Commit: 43e4ca8d053f7d8bbcbe62b31dc55f5ce93b782e Auto-Submitted: auto-generated The branch main has been updated by jwb: URL: https://cgit.FreeBSD.org/ports/commit/?id=43e4ca8d053f7d8bbcbe62b31dc55f5ce93b782e commit 43e4ca8d053f7d8bbcbe62b31dc55f5ce93b782e Author: Jason W. Bacon AuthorDate: 2024-03-16 13:31:06 +0000 Commit: Jason W. Bacon CommitDate: 2024-03-16 13:31:06 +0000 py-cutadapt: Update to 4.7 Send error message to stderr Add support for single-ended uBAM Drop Python 3.7 Changes: https://cutadapt.readthedocs.io/en/stable/changes.html Reported by: portscout --- biology/py-cutadapt/Makefile | 4 ++-- biology/py-cutadapt/distinfo | 6 +++--- 2 files changed, 5 insertions(+), 5 deletions(-) diff --git a/biology/py-cutadapt/Makefile b/biology/py-cutadapt/Makefile index 7f1c124fe8e7..a5d4e0267aa0 100644 --- a/biology/py-cutadapt/Makefile +++ b/biology/py-cutadapt/Makefile @@ -1,12 +1,12 @@ PORTNAME= cutadapt -DISTVERSION= 4.6 +DISTVERSION= 4.7 CATEGORIES= biology python MASTER_SITES= PYPI PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= jwb@FreeBSD.org COMMENT= Trim adapters from high-throughput sequencing reads -WWW= https://pypi.org/project/cutadapt/ +WWW= https://github.com/marcelm/cutadapt/ LICENSE= MIT LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/biology/py-cutadapt/distinfo b/biology/py-cutadapt/distinfo index 93bbf4b58753..acc95cb894d4 100644 --- a/biology/py-cutadapt/distinfo +++ b/biology/py-cutadapt/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1707060779 -SHA256 (cutadapt-4.6.tar.gz) = 924116f34569248035b16f58e73458ed4c0004e44823b80b07f4ab419272f591 -SIZE (cutadapt-4.6.tar.gz) = 250254 +TIMESTAMP = 1710508770 +SHA256 (cutadapt-4.7.tar.gz) = 8738a35b363eaf615665a4e7d1b4beb385cd93fb7ffdcf82cd4ab6457acc879b +SIZE (cutadapt-4.7.tar.gz) = 250893