Date: Sat, 27 May 2023 04:30:45 GMT From: Po-Chuan Hsieh <sunpoet@FreeBSD.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org Subject: git: d80f50246cbf - main - biology/libcombine: Fix build with libsbml 5.20.0 Message-ID: <202305270430.34R4UjGD037963@gitrepo.freebsd.org>
next in thread | raw e-mail | index | archive | help
The branch main has been updated by sunpoet: URL: https://cgit.FreeBSD.org/ports/commit/?id=d80f50246cbf0cafe274057987c9f34811ce21f5 commit d80f50246cbf0cafe274057987c9f34811ce21f5 Author: Po-Chuan Hsieh <sunpoet@FreeBSD.org> AuthorDate: 2023-05-27 04:13:56 +0000 Commit: Po-Chuan Hsieh <sunpoet@FreeBSD.org> CommitDate: 2023-05-27 04:24:05 +0000 biology/libcombine: Fix build with libsbml 5.20.0 ===> Configuring for libcombine-0.2.20 ===> Performing out-of-source build /bin/mkdir -p /wrkdirs/usr/ports/biology/libcombine/work/.build -- The CXX compiler identification is Clang 13.0.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/local/libexec/ccache/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Check for working CXX compiler: /usr/local/libexec/ccache/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Looking for BZ2_bzCompressInit in /usr/lib/libbz2.so -- Looking for BZ2_bzCompressInit in /usr/lib/libbz2.so - found -- Could NOT find PkgConfig (missing: PKG_CONFIG_EXECUTABLE) CMake Error at /usr/local/share/cmake/Modules/Internal/CheckSourceCompiles.cmake:51 (message): check_source_compiles: C: needs to be enabled before use. Call Stack (most recent call first): /usr/local/share/cmake/Modules/CheckCSourceCompiles.cmake:76 (cmake_check_source_compiles) CMakeModules/FindLIBXML.cmake:115 (CHECK_C_SOURCE_COMPILES) /usr/local/share/cmake/Modules/CMakeFindDependencyMacro.cmake:76 (find_package) /usr/local/lib/cmake/sbml-static-config.cmake:14 (find_dependency) CMakeModules/FindLIBSBML.cmake:42 (find_package) CMakeLists.txt:308 (find_package) -- LIBXML_LIBXML_TEST = CMake Error at /usr/local/share/cmake/Modules/Internal/CheckSourceCompiles.cmake:51 (message): check_source_compiles: C: needs to be enabled before use. Call Stack (most recent call first): /usr/local/share/cmake/Modules/CheckCSourceCompiles.cmake:76 (cmake_check_source_compiles) CMakeModules/FindLIBXML.cmake:125 (CHECK_C_SOURCE_COMPILES) /usr/local/share/cmake/Modules/CMakeFindDependencyMacro.cmake:76 (find_package) /usr/local/lib/cmake/sbml-static-config.cmake:14 (find_dependency) CMakeModules/FindLIBSBML.cmake:42 (find_package) CMakeLists.txt:308 (find_package) -- LIBXML_LIBXML_TEST2 = CMake Error at CMakeModules/FindLIBXML.cmake:132 (message): Unable to compile a test executable against LIBXML LIBXML_INCLUDE_DIR = /usr/local/include/libxml2 LIBXML_LIBRARY = /usr/local/lib/libxml2.so Call Stack (most recent call first): /usr/local/share/cmake/Modules/CMakeFindDependencyMacro.cmake:76 (find_package) /usr/local/lib/cmake/sbml-static-config.cmake:14 (find_dependency) CMakeModules/FindLIBSBML.cmake:42 (find_package) CMakeLists.txt:308 (find_package) -- Configuring incomplete, errors occurred! *** Error code 1 Stop. --- biology/libcombine/files/patch-CMakeLists.txt | 11 +++++++++++ 1 file changed, 11 insertions(+) diff --git a/biology/libcombine/files/patch-CMakeLists.txt b/biology/libcombine/files/patch-CMakeLists.txt new file mode 100644 index 000000000000..bec79c56523e --- /dev/null +++ b/biology/libcombine/files/patch-CMakeLists.txt @@ -0,0 +1,11 @@ +--- CMakeLists.txt.orig 2022-12-07 09:35:06 UTC ++++ CMakeLists.txt +@@ -44,7 +44,7 @@ set(LIBCOMBINE_VERSION "${LIBCOMBINE_VERSION_MAJOR}.${ + set(PACKAGE_NAME "libCombine") + + project(libCombine VERSION "${LIBCOMBINE_VERSION_MAJOR}.${LIBCOMBINE_VERSION_MINOR}.${LIBCOMBINE_VERSION_PATCH}" +- LANGUAGES CXX) ++ LANGUAGES C CXX) + + set(CMAKE_CXX_STANDARD 11) + set(CMAKE_CXX_STANDARD_REQUIRED ON)
Want to link to this message? Use this URL: <https://mail-archive.FreeBSD.org/cgi/mid.cgi?202305270430.34R4UjGD037963>