Date: Sun, 19 Feb 2023 18:11:49 GMT From: "Jason W. Bacon" <jwb@FreeBSD.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org Subject: git: ada9b15851e5 - main - biology/atac-seq: Drop biology/igv dep Message-ID: <202302191811.31JIBnid063133@gitrepo.freebsd.org>
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The branch main has been updated by jwb: URL: https://cgit.FreeBSD.org/ports/commit/?id=ada9b15851e566b9c67ef8374eba913aa3561292 commit ada9b15851e566b9c67ef8374eba913aa3561292 Author: Jason W. Bacon <jwb@FreeBSD.org> AuthorDate: 2023-02-19 18:11:12 +0000 Commit: Jason W. Bacon <jwb@FreeBSD.org> CommitDate: 2023-02-19 18:11:12 +0000 biology/atac-seq: Drop biology/igv dep Non-essential and currently broken --- biology/atac-seq/Makefile | 3 +-- 1 file changed, 1 insertion(+), 2 deletions(-) diff --git a/biology/atac-seq/Makefile b/biology/atac-seq/Makefile index a0da032ee1b0..46a1adb3bcda 100644 --- a/biology/atac-seq/Makefile +++ b/biology/atac-seq/Makefile @@ -1,5 +1,5 @@ PORTNAME= atac-seq -DISTVERSION= 0.1.1 +DISTVERSION= 0.1.2 CATEGORIES= biology python MASTER_SITES= # empty @@ -17,7 +17,6 @@ RUN_DEPENDS= sra-tools>0:biology/sra-tools \ bwa>0:biology/bwa \ bowtie2>0:biology/bowtie2 \ samtools>0:biology/samtools \ - igv>0:biology/igv \ ${PYTHON_PKGNAMEPREFIX}macs2>0:biology/py-macs2@${PY_FLAVOR} \ fasda>0:biology/fasda \ peak-classifier>0:biology/peak-classifier \
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