Date: Sat, 18 Jan 2025 09:52:29 GMT From: Yuri Victorovich <yuri@FreeBSD.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org Subject: git: 85e3e569f72b - main - math/mfem: update 4.4 =?utf-8?Q?=E2=86=92?= 4.7 Message-ID: <202501180952.50I9qTCu098934@gitrepo.freebsd.org>
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The branch main has been updated by yuri: URL: https://cgit.FreeBSD.org/ports/commit/?id=85e3e569f72b84d5f1ac0dfcaf572199a8a86913 commit 85e3e569f72b84d5f1ac0dfcaf572199a8a86913 Author: Yuri Victorovich <yuri@FreeBSD.org> AuthorDate: 2025-01-18 09:48:00 +0000 Commit: Yuri Victorovich <yuri@FreeBSD.org> CommitDate: 2025-01-18 09:52:24 +0000 math/mfem: update 4.4 → 4.7 --- math/mfem/Makefile | 7 ++- math/mfem/distinfo | 6 +- math/mfem/files/patch-general_isockstream.cpp | 11 ++++ math/mfem/files/patch-general_socketstream.cpp | 10 ++++ math/mfem/pkg-plist | 81 +++++++++++++++++++++----- science/spheral/Makefile | 4 +- 6 files changed, 97 insertions(+), 22 deletions(-) diff --git a/math/mfem/Makefile b/math/mfem/Makefile index 517c90f35c8a..2f987b464810 100644 --- a/math/mfem/Makefile +++ b/math/mfem/Makefile @@ -1,12 +1,12 @@ PORTNAME= mfem DISTVERSIONPREFIX= v -DISTVERSION= 4.4 -PORTREVISION= 11 +DISTVERSION= 4.7 CATEGORIES= math MAINTAINER= yuri@FreeBSD.org COMMENT= Lightweight, general, scalable C++ library for finite element methods -WWW= https://mfem.org/ +WWW= https://mfem.org \ + https://github.com/mfem/mfem LICENSE= LGPL21 LICENSE_FILE= ${WRKSRC}/LICENSE @@ -17,6 +17,7 @@ USE_LDCONFIG= yes CMAKE_ON= BUILD_SHARED_LIBS CMAKE_TESTING_ON= MFEM_ENABLE_TESTING # tests are broken, see https://github.com/mfem/mfem/issues/3163 +CMAKE_TESTING_TARGET= exec test OPTIONS_DEFINE= METIS SUPERLU OPTIONS_SINGLE= MPI diff --git a/math/mfem/distinfo b/math/mfem/distinfo index e3286f89afe6..b1f0f1520b57 100644 --- a/math/mfem/distinfo +++ b/math/mfem/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1650680791 -SHA256 (mfem-mfem-v4.4_GH0.tar.gz) = 0325a57854d9268dfe3f8d9b03836eb01b00a966d93162e6249857e9fab9c61f -SIZE (mfem-mfem-v4.4_GH0.tar.gz) = 3078651 +TIMESTAMP = 1737154420 +SHA256 (mfem-mfem-v4.7_GH0.tar.gz) = 731bc2665c13d4099f9c9c946eb83ab07cd2e78a9575d4fa62a96cdb40d6ba0f +SIZE (mfem-mfem-v4.7_GH0.tar.gz) = 3808224 diff --git a/math/mfem/files/patch-general_isockstream.cpp b/math/mfem/files/patch-general_isockstream.cpp new file mode 100644 index 000000000000..eb0b3543a3cb --- /dev/null +++ b/math/mfem/files/patch-general_isockstream.cpp @@ -0,0 +1,11 @@ +--- general/isockstream.cpp.orig 2024-09-08 17:21:14 UTC ++++ general/isockstream.cpp +@@ -86,7 +86,7 @@ int isockstream::establish() + return (-1); + } + +-#if defined(__APPLE__) ++#if defined(__APPLE__) || defined(__FreeBSD__) + if (bind(sfd, (const struct sockaddr *)rp->ai_addr, rp->ai_addrlen) < 0) + #else + if (bind(sfd, rp->ai_addr, rp->ai_addrlen) < 0) diff --git a/math/mfem/files/patch-general_socketstream.cpp b/math/mfem/files/patch-general_socketstream.cpp new file mode 100644 index 000000000000..d4b544da427d --- /dev/null +++ b/math/mfem/files/patch-general_socketstream.cpp @@ -0,0 +1,10 @@ +--- general/socketstream.cpp.orig 2024-05-08 08:02:30 UTC ++++ general/socketstream.cpp +@@ -20,6 +20,7 @@ + #include <cerrno> // errno + #ifndef _WIN32 + #include <netdb.h> // getaddrinfo ++#include <netinet/in.h> + #include <arpa/inet.h> // htons + #include <sys/types.h> // socket, setsockopt, connect, recv, send + #include <sys/socket.h> // socket, setsockopt, connect, recv, send diff --git a/math/mfem/pkg-plist b/math/mfem/pkg-plist index 338963d7046c..f92dbc093847 100644 --- a/math/mfem/pkg-plist +++ b/math/mfem/pkg-plist @@ -1,31 +1,40 @@ include/mfem-performance.hpp include/mfem.hpp +include/mfem/config/_config.hpp include/mfem/config/config.hpp include/mfem/config/tconfig.hpp include/mfem/fem/adios2datacollection.hpp include/mfem/fem/bilinearform.hpp include/mfem/fem/bilinearform_ext.hpp include/mfem/fem/bilininteg.hpp -include/mfem/fem/ceed/algebraic.hpp -include/mfem/fem/ceed/coefficient.hpp -include/mfem/fem/ceed/convection.hpp -include/mfem/fem/ceed/diffusion.hpp -include/mfem/fem/ceed/full-assembly.hpp -include/mfem/fem/ceed/integrator.hpp -include/mfem/fem/ceed/mass.hpp -include/mfem/fem/ceed/nlconvection.hpp -include/mfem/fem/ceed/operator.hpp -include/mfem/fem/ceed/solvers-atpmg.hpp -include/mfem/fem/ceed/util.hpp +include/mfem/fem/ceed/integrators/convection/convection.hpp +include/mfem/fem/ceed/integrators/diffusion/diffusion.hpp +include/mfem/fem/ceed/integrators/mass/mass.hpp +include/mfem/fem/ceed/integrators/nlconvection/nlconvection.hpp +include/mfem/fem/ceed/interface/basis.hpp +include/mfem/fem/ceed/interface/ceed.hpp +include/mfem/fem/ceed/interface/coefficient.hpp +include/mfem/fem/ceed/interface/integrator.hpp +include/mfem/fem/ceed/interface/interface.hpp +include/mfem/fem/ceed/interface/mixed_integrator.hpp +include/mfem/fem/ceed/interface/operator.hpp +include/mfem/fem/ceed/interface/restriction.hpp +include/mfem/fem/ceed/interface/util.hpp +include/mfem/fem/ceed/solvers/algebraic.hpp +include/mfem/fem/ceed/solvers/full-assembly.hpp +include/mfem/fem/ceed/solvers/solvers-atpmg.hpp include/mfem/fem/coefficient.hpp include/mfem/fem/complex_fem.hpp include/mfem/fem/conduitdatacollection.hpp include/mfem/fem/convergence.hpp include/mfem/fem/datacollection.hpp +include/mfem/fem/dgmassinv.hpp +include/mfem/fem/dgmassinv_kernels.hpp include/mfem/fem/doftrans.hpp include/mfem/fem/eltrans.hpp include/mfem/fem/estimators.hpp include/mfem/fem/fe.hpp +include/mfem/fem/fe/face_map_utils.hpp include/mfem/fem/fe/fe_base.hpp include/mfem/fem/fe/fe_fixed_order.hpp include/mfem/fem/fe/fe_h1.hpp @@ -45,24 +54,53 @@ include/mfem/fem/geom.hpp include/mfem/fem/gridfunc.hpp include/mfem/fem/gslib.hpp include/mfem/fem/hybridization.hpp +include/mfem/fem/hyperbolic.hpp +include/mfem/fem/integ/bilininteg_diffusion_kernels.hpp +include/mfem/fem/integ/bilininteg_elasticity_kernels.hpp +include/mfem/fem/integ/bilininteg_hcurl_kernels.hpp +include/mfem/fem/integ/bilininteg_hcurlhdiv_kernels.hpp +include/mfem/fem/integ/bilininteg_hdiv_kernels.hpp +include/mfem/fem/integ/bilininteg_mass_kernels.hpp include/mfem/fem/intrules.hpp +include/mfem/fem/intrules_cut.hpp +include/mfem/fem/kdtree.hpp include/mfem/fem/kernels.hpp include/mfem/fem/linearform.hpp +include/mfem/fem/linearform_ext.hpp include/mfem/fem/lininteg.hpp -include/mfem/fem/lor.hpp +include/mfem/fem/lor/lor.hpp +include/mfem/fem/lor/lor_ads.hpp +include/mfem/fem/lor/lor_ams.hpp +include/mfem/fem/lor/lor_batched.hpp +include/mfem/fem/lor/lor_h1.hpp +include/mfem/fem/lor/lor_h1_impl.hpp +include/mfem/fem/lor/lor_nd.hpp +include/mfem/fem/lor/lor_nd_impl.hpp +include/mfem/fem/lor/lor_rt.hpp +include/mfem/fem/lor/lor_rt_impl.hpp +include/mfem/fem/lor/lor_util.hpp +include/mfem/fem/moonolith/cut.hpp +include/mfem/fem/moonolith/mortarassembler.hpp +include/mfem/fem/moonolith/mortarintegrator.hpp +include/mfem/fem/moonolith/pmortarassembler.hpp +include/mfem/fem/moonolith/transfer.hpp +include/mfem/fem/moonolith/transferutils.hpp include/mfem/fem/multigrid.hpp include/mfem/fem/nonlinearform.hpp include/mfem/fem/nonlinearform_ext.hpp include/mfem/fem/nonlininteg.hpp +include/mfem/fem/normal_deriv_restriction.hpp include/mfem/fem/pbilinearform.hpp include/mfem/fem/pfespace.hpp include/mfem/fem/pgridfunc.hpp include/mfem/fem/plinearform.hpp include/mfem/fem/pnonlinearform.hpp include/mfem/fem/prestriction.hpp +include/mfem/fem/qfunction.hpp include/mfem/fem/qinterp/dispatch.hpp include/mfem/fem/qinterp/eval.hpp include/mfem/fem/qinterp/grad.hpp +include/mfem/fem/qspace.hpp include/mfem/fem/quadinterpolator.hpp include/mfem/fem/quadinterpolator_face.hpp include/mfem/fem/restriction.hpp @@ -84,11 +122,13 @@ include/mfem/fem/transfer.hpp include/mfem/general/adios2stream.hpp include/mfem/general/annotation.hpp include/mfem/general/array.hpp +include/mfem/general/arrays_by_name.hpp include/mfem/general/backends.hpp include/mfem/general/binaryio.hpp include/mfem/general/communication.hpp include/mfem/general/cuda.hpp include/mfem/general/device.hpp +include/mfem/general/enzyme.hpp include/mfem/general/error.hpp include/mfem/general/forall.hpp include/mfem/general/gecko.hpp @@ -96,6 +136,7 @@ include/mfem/general/globals.hpp include/mfem/general/hash.hpp include/mfem/general/hip.hpp include/mfem/general/isockstream.hpp +include/mfem/general/kdtree.hpp include/mfem/general/mem_alloc.hpp include/mfem/general/mem_manager.hpp include/mfem/general/occa.hpp @@ -116,12 +157,14 @@ include/mfem/linalg/auxiliary.hpp include/mfem/linalg/blockmatrix.hpp include/mfem/linalg/blockoperator.hpp include/mfem/linalg/blockvector.hpp +include/mfem/linalg/complex_densemat.hpp include/mfem/linalg/complex_operator.hpp include/mfem/linalg/constraints.hpp include/mfem/linalg/cpardiso.hpp include/mfem/linalg/densemat.hpp include/mfem/linalg/dinvariants.hpp include/mfem/linalg/dtensor.hpp +include/mfem/linalg/dual.hpp include/mfem/linalg/ginkgo.hpp include/mfem/linalg/handle.hpp include/mfem/linalg/hiop.hpp @@ -134,6 +177,7 @@ include/mfem/linalg/matrix.hpp include/mfem/linalg/mumps.hpp include/mfem/linalg/ode.hpp include/mfem/linalg/operator.hpp +include/mfem/linalg/pardiso.hpp include/mfem/linalg/petsc.hpp include/mfem/linalg/petscinternals.hpp include/mfem/linalg/simd.hpp @@ -155,17 +199,19 @@ include/mfem/linalg/strumpack.hpp include/mfem/linalg/sundials.hpp include/mfem/linalg/superlu.hpp include/mfem/linalg/symmat.hpp +include/mfem/linalg/tensor.hpp include/mfem/linalg/tlayout.hpp include/mfem/linalg/tmatrix.hpp include/mfem/linalg/ttensor.hpp include/mfem/linalg/vector.hpp +include/mfem/mesh/attribute_sets.hpp include/mfem/mesh/element.hpp +include/mfem/mesh/face_nbr_geom.hpp include/mfem/mesh/gmsh.hpp include/mfem/mesh/hexahedron.hpp include/mfem/mesh/mesh.hpp include/mfem/mesh/mesh_headers.hpp include/mfem/mesh/mesh_operators.hpp -include/mfem/mesh/mesquite.hpp include/mfem/mesh/ncmesh.hpp include/mfem/mesh/ncmesh_tables.hpp include/mfem/mesh/nurbs.hpp @@ -176,6 +222,13 @@ include/mfem/mesh/pumi.hpp include/mfem/mesh/pyramid.hpp include/mfem/mesh/quadrilateral.hpp include/mfem/mesh/segment.hpp +include/mfem/mesh/spacing.hpp +include/mfem/mesh/submesh/psubmesh.hpp +include/mfem/mesh/submesh/ptransfermap.hpp +include/mfem/mesh/submesh/submesh.hpp +include/mfem/mesh/submesh/submesh_utils.hpp +include/mfem/mesh/submesh/transfer_category.hpp +include/mfem/mesh/submesh/transfermap.hpp include/mfem/mesh/tetrahedron.hpp include/mfem/mesh/tmesh.hpp include/mfem/mesh/triangle.hpp @@ -189,6 +242,6 @@ lib/cmake/mfem/MFEMConfigVersion.cmake lib/cmake/mfem/MFEMTargets-%%CMAKE_BUILD_TYPE%%.cmake lib/cmake/mfem/MFEMTargets.cmake lib/libmfem.so -lib/libmfem.so.4.4.0 +lib/libmfem.so.4.7.0 %%DATADIR%%/config.mk %%DATADIR%%/test.mk diff --git a/science/spheral/Makefile b/science/spheral/Makefile index 7bb2854e4b5b..0e46ac472e73 100644 --- a/science/spheral/Makefile +++ b/science/spheral/Makefile @@ -1,7 +1,7 @@ PORTNAME= spheral DISTVERSIONPREFIX= v DISTVERSION= 2024.06.1 -PORTREVISION= 2 +PORTREVISION= 3 CATEGORIES= science # physics MAINTAINER= yuri@FreeBSD.org @@ -12,7 +12,7 @@ LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/License.txt BUILD_DEPENDS= ${LOCALBASE}/include/polyclipper2d.hh:math/polyclipper -LIB_DEPENDS= libaxom.so:science/axom \ +LIB_DEPENDS= libaxom_core.so:science/axom \ libboost_filesystem.so:devel/boost-libs \ libconduit.so:science/conduit \ libhdf5.so:science/hdf5 \
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