From owner-freebsd-ports-bugs@freebsd.org Tue Jul 23 04:32:47 2019 Return-Path: Delivered-To: freebsd-ports-bugs@mailman.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mailman.nyi.freebsd.org (Postfix) with ESMTP id B4237C4BED for ; Tue, 23 Jul 2019 04:32:47 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: from mailman.nyi.freebsd.org (mailman.nyi.freebsd.org [IPv6:2610:1c1:1:606c::50:13]) by mx1.freebsd.org (Postfix) with ESMTP id 971B674C65 for ; Tue, 23 Jul 2019 04:32:47 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: by mailman.nyi.freebsd.org (Postfix) id 96B4BC4BEC; Tue, 23 Jul 2019 04:32:47 +0000 (UTC) Delivered-To: ports-bugs@mailman.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mailman.nyi.freebsd.org (Postfix) with ESMTP id 967A0C4BEB for ; Tue, 23 Jul 2019 04:32:47 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) server-signature RSA-PSS (4096 bits) client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "Let's Encrypt Authority X3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 75A3674C63 for ; Tue, 23 Jul 2019 04:32:47 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: from kenobi.freebsd.org (kenobi.freebsd.org [IPv6:2610:1c1:1:606c::50:1d]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id 3E8E4203C8 for ; Tue, 23 Jul 2019 04:32:47 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: from kenobi.freebsd.org ([127.0.1.5]) by kenobi.freebsd.org (8.15.2/8.15.2) with ESMTP id x6N4WlLl006502 for ; Tue, 23 Jul 2019 04:32:47 GMT (envelope-from bugzilla-noreply@freebsd.org) Received: (from www@localhost) by kenobi.freebsd.org (8.15.2/8.15.2/Submit) id x6N4WlvS006501 for ports-bugs@FreeBSD.org; Tue, 23 Jul 2019 04:32:47 GMT (envelope-from bugzilla-noreply@freebsd.org) X-Authentication-Warning: kenobi.freebsd.org: www set sender to bugzilla-noreply@freebsd.org using -f From: bugzilla-noreply@freebsd.org To: ports-bugs@FreeBSD.org Subject: [Bug 239392] biology/gatk: fails to build with Gradle 4.10.3 Date: Tue, 23 Jul 2019 04:32:46 +0000 X-Bugzilla-Reason: AssignedTo X-Bugzilla-Type: new X-Bugzilla-Watch-Reason: None X-Bugzilla-Product: Ports & Packages X-Bugzilla-Component: Individual Port(s) X-Bugzilla-Version: Latest X-Bugzilla-Keywords: X-Bugzilla-Severity: Affects Only Me X-Bugzilla-Who: tobik@freebsd.org X-Bugzilla-Status: New X-Bugzilla-Resolution: X-Bugzilla-Priority: --- X-Bugzilla-Assigned-To: yuri@freebsd.org X-Bugzilla-Flags: maintainer-feedback? X-Bugzilla-Changed-Fields: bug_id short_desc product version rep_platform op_sys bug_status bug_severity priority component assigned_to reporter blocked flagtypes.name Message-ID: Content-Type: text/plain; charset="UTF-8" Content-Transfer-Encoding: quoted-printable X-Bugzilla-URL: https://bugs.freebsd.org/bugzilla/ Auto-Submitted: auto-generated MIME-Version: 1.0 X-Rspamd-Queue-Id: 971B674C65 X-Spamd-Bar: -- Authentication-Results: mx1.freebsd.org X-Spamd-Result: default: False [-2.99 / 15.00]; local_wl_from(0.00)[freebsd.org]; NEURAL_HAM_MEDIUM(-1.00)[-1.000,0]; NEURAL_HAM_SHORT(-0.99)[-0.986,0]; ASN(0.00)[asn:11403, ipnet:2610:1c1:1::/48, country:US]; NEURAL_HAM_LONG(-1.00)[-1.000,0] X-BeenThere: freebsd-ports-bugs@freebsd.org X-Mailman-Version: 2.1.29 Precedence: list List-Id: Ports bug reports List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 23 Jul 2019 04:32:47 -0000 https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D239392 Bug ID: 239392 Summary: biology/gatk: fails to build with Gradle 4.10.3 Product: Ports & Packages Version: Latest Hardware: Any OS: Any Status: New Severity: Affects Only Me Priority: --- Component: Individual Port(s) Assignee: yuri@freebsd.org Reporter: tobik@freebsd.org Blocks: 237443 Assignee: yuri@freebsd.org Flags: maintainer-feedback?(yuri@freebsd.org) I want to update java/openjfx8-devel and for that I also need to update devel/gradle4 to at least 4.8. While updating it to 4.10.3 seems to be fine for biology/igv and openjfx8-devel, it break gatk: FAILURE: Build failed with an exception. * Where: Build file '/wrkdirs/usr/ports/biology/gatk/work/gatk-4.0.11.0/build.gradle' line: 17 * What went wrong: Plugin [id: 'de.undercouch.download', version: '2.1.0'] was not found in an= y of the following sources: - Gradle Core Plugins (plugin is not in 'org.gradle' namespace) - Plugin Repositories (could not resolve plugin artifact 'de.undercouch.download:de.undercouch.download.gradle.plugin:2.1.0') Searched in the following repositories: Gradle Central Plugin Repository * Try: Run with --stacktrace option to get the stack trace. Run with --info or --d= ebug option to get more log output. Run with --scan to get full insights. * Get more help at https://help.gradle.org BUILD FAILED in 4s *** Error code 1 Any ideas how to fix this other than creating a devel/gradle46 for gatk? The devel/gradle4 update is part of the patch attached to bug #237443. Referenced Bugs: https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D237443 [Bug 237443] java/openjfx8-devel: Update to 8u202-b07 --=20 You are receiving this mail because: You are the assignee for the bug.=