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Date:      Tue, 23 Jul 2019 04:32:46 +0000
From:      bugzilla-noreply@freebsd.org
To:        ports-bugs@FreeBSD.org
Subject:   [Bug 239392] biology/gatk: fails to build with Gradle 4.10.3
Message-ID:  <bug-239392-7788@https.bugs.freebsd.org/bugzilla/>
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https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D239392

            Bug ID: 239392
           Summary: biology/gatk: fails to build with Gradle 4.10.3
           Product: Ports & Packages
           Version: Latest
          Hardware: Any
                OS: Any
            Status: New
          Severity: Affects Only Me
          Priority: ---
         Component: Individual Port(s)
          Assignee: yuri@freebsd.org
          Reporter: tobik@freebsd.org
            Blocks: 237443
          Assignee: yuri@freebsd.org
             Flags: maintainer-feedback?(yuri@freebsd.org)

I want to update java/openjfx8-devel and for that I also need to
update devel/gradle4 to at least 4.8.  While updating it to 4.10.3
seems to be fine for biology/igv and openjfx8-devel, it break gatk:

FAILURE: Build failed with an exception.

* Where:
Build file '/wrkdirs/usr/ports/biology/gatk/work/gatk-4.0.11.0/build.gradle'
line: 17

* What went wrong:
Plugin [id: 'de.undercouch.download', version: '2.1.0'] was not found in an=
y of
the following sources:

- Gradle Core Plugins (plugin is not in 'org.gradle' namespace)
- Plugin Repositories (could not resolve plugin artifact
'de.undercouch.download:de.undercouch.download.gradle.plugin:2.1.0')
  Searched in the following repositories:
    Gradle Central Plugin Repository

* Try:
Run with --stacktrace option to get the stack trace. Run with --info or --d=
ebug
option to get more log output. Run with --scan to get full insights.

* Get more help at https://help.gradle.org

BUILD FAILED in 4s
*** Error code 1

Any ideas how to fix this other than creating a devel/gradle46 for gatk?

The devel/gradle4 update is part of the patch attached to bug #237443.


Referenced Bugs:

https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D237443
[Bug 237443] java/openjfx8-devel: Update to 8u202-b07
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