Date: Thu, 29 Jul 2021 22:20:53 +0000 From: bugzilla-noreply@freebsd.org To: python@FreeBSD.org Subject: [Bug 257400] science/py-scipy Add OPTION for Atlas blas Message-ID: <bug-257400-21822-6uD7PQK7Im@https.bugs.freebsd.org/bugzilla/> In-Reply-To: <bug-257400-21822@https.bugs.freebsd.org/bugzilla/> References: <bug-257400-21822@https.bugs.freebsd.org/bugzilla/>
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https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D257400 alt2600@icloud.com changed: What |Removed |Added ---------------------------------------------------------------------------- Attachment #226716|0 |1 is obsolete| | --- Comment #9 from alt2600@icloud.com --- Created attachment 226789 --> https://bugs.freebsd.org/bugzilla/attachment.cgi?id=3D226789&action= =3Dedit git-diff-scipy-add-atlas-rev1 confirmed under openblas based bhyve to configure and build correctly. Noti= ced under PR 251718 and from the configure this wants both openblas and blas so= I added back a LIB_DEPENDS for the OPENBLAS option to include it, but otherwi= se the uses blaslapack:openblas caused no issue. not sure if in the end this p= ort wants cblas or how applicable that is with openblas but I just wanted to confirm no breakage, not extend features. This patch will allow ATLAS or OpenBLAS use, maintaining OpenBLAS as the default. I consider this patch to= now be tested and complete. it should work for Netlib case, but if Atlas is installed it will bring in = an Atlas dependency, despite possibly not linking to it in reality. If someone wants to get netlib I'm sure they can explore the syntax further. I can con= firm it appears to configure for it, build, and install, but still shows an Atlas pkg dependency once installed so it remains excluded. see math/py-numpy if someone really wanted to take the time for netlib.=20 ### make configure tail excerpt creating /tmp/tmpqmtazvj7/tmp creating /tmp/tmpqmtazvj7/tmp/tmpqmtazvj7 compile options: '-MMD -MF /tmp/tmpqmtazvj7/file.c.d -c' cc: /tmp/tmpqmtazvj7/file.c FOUND: libraries =3D ['openblas', 'blas'] library_dirs =3D ['/usr/local/lib'] include_dirs =3D ['/usr/include', '/usr/local/include'] language =3D c define_macros =3D [('HAVE_CBLAS', None)] FOUND: define_macros =3D [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)] libraries =3D ['openblas', 'blas'] library_dirs =3D ['/usr/local/lib'] include_dirs =3D ['/usr/include', '/usr/local/include'] language =3D c non-existing path in 'scipy/signal/windows': 'tests' non-existing path in 'scipy/sparse': 'sparsetools/sparsetools_impl.h' non-existing path in 'scipy/sparse': 'sparsetools/bsr_impl.h' non-existing path in 'scipy/sparse': 'sparsetools/csc_impl.h' non-existing path in 'scipy/sparse': 'sparsetools/csr_impl.h' non-existing path in 'scipy/sparse': 'sparsetools/other_impl.h' [makenpz] scipy/special/tests/data/boost.npz not rebuilt [makenpz] scipy/special/tests/data/gsl.npz not rebuilt [makenpz] scipy/special/tests/data/local.npz not rebuilt running config /usr/ports/science/py-scipy $ sudo make install clean Password: =3D=3D=3D> Installing for py38-scipy-1.6.0 =3D=3D=3D> Checking if py38-scipy is already installed =3D=3D=3D> Registering installation for py38-scipy-1.6.0 Installing py38-scipy-1.6.0... /usr/ports/science/py-scipy $ pkg info -dr py38-scipy py38-scipy-1.6.0 Depends on : py38-numpy-1.16.6_2,1 openblas-0.3.16,1 blas-3.10.0 python38-3.8.11 gcc10-10.3.0 py38-setuptools-57.0.0 --=20 You are receiving this mail because: You are the assignee for the bug.=
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