Date: Sat, 22 Jul 2023 08:55:04 GMT From: Yuri Victorovich <yuri@FreeBSD.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org Subject: git: 97a754c68cc2 - main - =?utf-8?Q?biology/abyss:=20Update=202.3.5=20=E2=86=92=202.3.7?= Message-ID: <202307220855.36M8t4DO032695@gitrepo.freebsd.org>
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The branch main has been updated by yuri: URL: https://cgit.FreeBSD.org/ports/commit/?id=97a754c68cc2783fe0574f1efff78f278befe42b commit 97a754c68cc2783fe0574f1efff78f278befe42b Author: Yuri Victorovich <yuri@FreeBSD.org> AuthorDate: 2023-07-22 08:39:07 +0000 Commit: Yuri Victorovich <yuri@FreeBSD.org> CommitDate: 2023-07-22 08:55:01 +0000 biology/abyss: Update 2.3.5 → 2.3.7 Reported by: portscout --- biology/abyss/Makefile | 6 +++--- biology/abyss/distinfo | 6 +++--- .../files/patch-RResolver_btllib_include_btllib_status.hpp | 11 ----------- 3 files changed, 6 insertions(+), 17 deletions(-) diff --git a/biology/abyss/Makefile b/biology/abyss/Makefile index d023c7d5b8b6..8458e069649a 100644 --- a/biology/abyss/Makefile +++ b/biology/abyss/Makefile @@ -1,6 +1,5 @@ PORTNAME= abyss -DISTVERSION= 2.3.5 -PORTREVISION= 2 +DISTVERSION= 2.3.7 CATEGORIES= biology MAINTAINER= yuri@FreeBSD.org @@ -15,7 +14,8 @@ BROKEN_i386= result of comparison of constant 18446744073709551615 with expressi BUILD_DEPENDS= ${LOCALBASE}/include/boost/version.hpp:devel/boost-libs \ ghc:lang/ghc \ pandoc:textproc/hs-pandoc # pandoc is required just for one man page: abyss-sealer -LIB_DEPENDS= libffi.so:devel/libffi \ +LIB_DEPENDS= libbtllib.so:biology/btllib \ + libffi.so:devel/libffi \ libgmp.so:math/gmp \ libmpich.so:net/mpich # binaries aren't linked with libmpich.so for some reason RUN_DEPENDS= bash:shells/bash \ diff --git a/biology/abyss/distinfo b/biology/abyss/distinfo index 82cc32c0fa85..f27d6fc7904a 100644 --- a/biology/abyss/distinfo +++ b/biology/abyss/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1659120367 -SHA256 (bcgsc-abyss-2.3.5_GH0.tar.gz) = 28fb7d75faa2599c3c4d2d2c29d320612ca1539f1772728d1acdfffb4b82dee5 -SIZE (bcgsc-abyss-2.3.5_GH0.tar.gz) = 3511232 +TIMESTAMP = 1689963359 +SHA256 (bcgsc-abyss-2.3.7_GH0.tar.gz) = eb1d814621ad2accaf19ea009453af891b29663de9f96c0da32c83fbfb71b85e +SIZE (bcgsc-abyss-2.3.7_GH0.tar.gz) = 1323221 diff --git a/biology/abyss/files/patch-RResolver_btllib_include_btllib_status.hpp b/biology/abyss/files/patch-RResolver_btllib_include_btllib_status.hpp deleted file mode 100644 index 01427a36b2ac..000000000000 --- a/biology/abyss/files/patch-RResolver_btllib_include_btllib_status.hpp +++ /dev/null @@ -1,11 +0,0 @@ ---- RResolver/btllib/include/btllib/status.hpp.orig 2022-07-29 18:56:25 UTC -+++ RResolver/btllib/include/btllib/status.hpp -@@ -151,7 +151,7 @@ get_strerror() - char buf[buflen]; - // POSIX and GNU implementation of strerror_r differ, even in function signature - // and so we need to check which one is used --#if __APPLE__ || \ -+#if __APPLE__ || defined(__FreeBSD__) || \ - ((_POSIX_C_SOURCE >= 200112L || _XOPEN_SOURCE >= 600) && !_GNU_SOURCE) - strerror_r(errno, buf, buflen); - return buf;
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