From owner-freebsd-ports-bugs@FreeBSD.ORG Fri Mar 14 08:20:01 2014 Return-Path: Delivered-To: freebsd-ports-bugs@smarthost.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) (using TLSv1 with cipher ADH-AES256-SHA (256/256 bits)) (No client certificate requested) by hub.freebsd.org (Postfix) with ESMTPS id 1160F53C for ; Fri, 14 Mar 2014 08:20:01 +0000 (UTC) Received: from freefall.freebsd.org (freefall.freebsd.org [IPv6:2001:1900:2254:206c::16:87]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by mx1.freebsd.org (Postfix) with ESMTPS id D65BB25C for ; Fri, 14 Mar 2014 08:20:00 +0000 (UTC) Received: from freefall.freebsd.org (localhost [127.0.0.1]) by freefall.freebsd.org (8.14.8/8.14.8) with ESMTP id s2E8K07O092727 for ; Fri, 14 Mar 2014 08:20:00 GMT (envelope-from gnats@freefall.freebsd.org) Received: (from gnats@localhost) by freefall.freebsd.org (8.14.8/8.14.8/Submit) id s2E8K0Co092722; Fri, 14 Mar 2014 08:20:00 GMT (envelope-from gnats) Resent-Date: Fri, 14 Mar 2014 08:20:00 GMT Resent-Message-Id: <201403140820.s2E8K0Co092722@freefall.freebsd.org> Resent-From: FreeBSD-gnats-submit@FreeBSD.org (GNATS Filer) Resent-To: freebsd-ports-bugs@FreeBSD.org Resent-Reply-To: FreeBSD-gnats-submit@FreeBSD.org, Tsurutani Naoki Received: from mx1.freebsd.org (mx1.freebsd.org [8.8.178.115]) (using TLSv1 with cipher ADH-AES256-SHA (256/256 bits)) (No client certificate requested) by hub.freebsd.org (Postfix) with ESMTPS id C22CBE09 for ; Fri, 14 Mar 2014 08:15:19 +0000 (UTC) Received: from smtp-auth.kuins.kyoto-u.ac.jp (smtp-auth.kuins.kyoto-u.ac.jp [133.3.248.237]) by mx1.freebsd.org (Postfix) with ESMTP id 6393820F for ; Fri, 14 Mar 2014 08:15:18 +0000 (UTC) Received: from smtp-auth.kuins.kyoto-u.ac.jp (smtp-auth.kuins.kyoto-u.ac.jp [127.0.0.1]) by postfix.imss70 (Postfix) with ESMTP id 327BF2EC003; Fri, 14 Mar 2014 17:15:18 +0900 (JST) Received: from h120.65.226.10.32118.vlan.kuins.net (p17154-ipngn100402kyoto.kyoto.ocn.ne.jp [180.10.96.154]) by smtp-auth.kuins.kyoto-u.ac.jp (Postfix) with ESMTP id 179522EC001; Fri, 14 Mar 2014 17:15:18 +0900 (JST) Received: from h116.65.226.10.32118.vlan.kuins.net (h116.65.226.10.32118.vlan.kuins.net [192.168.3.116]) by h120.65.226.10.32118.vlan.kuins.net (8.14.6/8.14.6/20071004-1) with ESMTP id s2E8FFET037631; Fri, 14 Mar 2014 17:15:15 +0900 (JST) (envelope-from turutani@scphys.kyoto-u.ac.jp) Received: from h116.65.226.10.32118.vlan.kuins.net (localhost [127.0.0.1]) by h116.65.226.10.32118.vlan.kuins.net (8.14.6/8.14.6/20070718-1) with ESMTP id s2E8FYVR049340; Fri, 14 Mar 2014 17:15:34 +0900 (JST) (envelope-from turutani@h116.65.226.10.32118.vlan.kuins.net) Received: (from turutani@localhost) by h116.65.226.10.32118.vlan.kuins.net (8.14.6/8.14.6/Submit) id s2E8FYDd049339; Fri, 14 Mar 2014 17:15:34 +0900 (JST) (envelope-from turutani) Message-Id: <201403140815.s2E8FYDd049339@h116.65.226.10.32118.vlan.kuins.net> Date: Fri, 14 Mar 2014 17:15:34 +0900 (JST) From: Tsurutani Naoki To: FreeBSD-gnats-submit@freebsd.org X-Send-Pr-Version: 3.114 Subject: ports/187569: change executable's name in biology/tinker, to avoid conflicts Cc: turutani@scphys.kyoto-u.ac.jp X-BeenThere: freebsd-ports-bugs@freebsd.org X-Mailman-Version: 2.1.17 Precedence: list Reply-To: Tsurutani Naoki List-Id: Ports bug reports List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Fri, 14 Mar 2014 08:20:01 -0000 >Number: 187569 >Category: ports >Synopsis: change executable's name in biology/tinker, to avoid conflicts >Confidential: no >Severity: serious >Priority: medium >Responsible: freebsd-ports-bugs >State: open >Quarter: >Keywords: >Date-Required: >Class: change-request >Submitter-Id: current-users >Arrival-Date: Fri Mar 14 08:20:00 UTC 2014 >Closed-Date: >Last-Modified: >Originator: Tsurutani Naoki >Release: FreeBSD 8.4-PRERELEASE amd64 >Organization: >Environment: System: FreeBSD h116.65.226.10.32118.vlan.kuins.net 8.4-PRERELEASE FreeBSD 8.4-PRERELEASE #1 r249390: Thu May 2 17:05:06 JST 2013 turutani@h116.65.226.10.32118.vlan.kuins.net:/usr/local/work/usr/obj/usr/src/sys/POLYMER13 amd64 >Description: biology/tinker conflicts with textproc/hunspell. this is already reported and marked as "CONFLICTS", but this prevents installing mail/thunderbird, www/libxul, etc. biology/tinker is not required by the other ports, and i think only one executable "analyze" with tinker should be changed to "analyze_t" or any other names. this lets many people to install thunderbird and tinker on the same host. if someone who thinks this bothers him, set alias in his shell. >How-To-Repeat: >Fix: here is a patch only for tinker. please remove CONFLICTS line from hunspell' Makefile. diff -urN tinker.orig/Makefile tinker/Makefile --- tinker.orig/Makefile 2014-03-11 05:55:20.000000000 +0900 +++ tinker/Makefile 2014-03-14 17:04:29.000000000 +0900 @@ -12,8 +12,6 @@ RESTRICTED= author requests no distribution except from his FTP site -CONFLICTS_INSTALL= hunspell-[0-9]* - OPTIONS_DEFINE= OPTIMIZED_FFLAGS DOCS EXAMPLES OPTIMIZED_FFLAGS_DESC= compilation optimizations diff -urN tinker.orig/files/patch-make__Makefile tinker/files/patch-make__Makefile --- tinker.orig/files/patch-make__Makefile 2013-12-19 03:27:04.000000000 +0900 +++ tinker/files/patch-make__Makefile 2014-03-14 17:00:09.000000000 +0900 @@ -1,5 +1,5 @@ ---- make/Makefile.orig 2012-06-29 14:51:42.000000000 +0900 -+++ make/Makefile 2012-11-10 00:12:19.000000000 +0900 +--- make/Makefile.orig 2013-07-14 11:23:53.000000000 +0900 ++++ make/Makefile 2014-03-14 16:59:17.000000000 +0900 @@ -30,9 +30,9 @@ ## LINKDIR Linked Copies of TINKER Executables ## @@ -73,7 +73,7 @@ all: ${EXEFILES} -@@ -612,70 +625,70 @@ +@@ -612,74 +625,74 @@ rm -f *.o *.a *.x listing: @@ -143,7 +143,7 @@ - mv xyzpdb.x $(BINDIR)/xyzpdb - mv xyzsybyl.x $(BINDIR)/xyzsybyl + ${BSD_INSTALL_PROGRAM} alchemy.x $(BINDIR)/alchemy -+ ${BSD_INSTALL_PROGRAM} analyze.x $(BINDIR)/analyze ++ ${BSD_INSTALL_PROGRAM} analyze.x $(BINDIR)/analyze_t + ${BSD_INSTALL_PROGRAM} anneal.x $(BINDIR)/anneal + ${BSD_INSTALL_PROGRAM} archive.x $(BINDIR)/archive + ${BSD_INSTALL_PROGRAM} bar.x $(BINDIR)/bar @@ -206,3 +206,17 @@ remove_links: rm -f $(LINKDIR)/alchemy +- rm -f $(LINKDIR)/analyze ++ rm -f $(LINKDIR)/analyze_t + rm -f $(LINKDIR)/anneal + rm -f $(LINKDIR)/archive + rm -f $(LINKDIR)/bar +@@ -742,7 +755,7 @@ + + create_links: + ln -s $(BINDIR)/alchemy $(LINKDIR)/alchemy +- ln -s $(BINDIR)/analyze $(LINKDIR)/analyze ++ ln -s $(BINDIR)/analyze_t $(LINKDIR)/analyze_t + ln -s $(BINDIR)/anneal $(LINKDIR)/anneal + ln -s $(BINDIR)/archive $(LINKDIR)/archive + ln -s $(BINDIR)/bar $(LINKDIR)/bar diff -urN tinker.orig/pkg-plist tinker/pkg-plist --- tinker.orig/pkg-plist 2013-07-15 23:50:22.000000000 +0900 +++ tinker/pkg-plist 2014-03-14 17:00:37.000000000 +0900 @@ -1,5 +1,5 @@ bin/alchemy -bin/analyze +bin/analyze_t bin/anneal bin/archive bin/bar >Release-Note: >Audit-Trail: >Unformatted: