From owner-freebsd-ports-bugs@FreeBSD.ORG Tue Oct 26 06:52:46 2004 Return-Path: Delivered-To: freebsd-ports-bugs@freebsd.org Received: from mx1.FreeBSD.org (mx1.freebsd.org [216.136.204.125]) by hub.freebsd.org (Postfix) with ESMTP id AD7D416A4CE for ; Tue, 26 Oct 2004 06:52:46 +0000 (GMT) Received: from wproxy.gmail.com (wproxy.gmail.com [64.233.184.193]) by mx1.FreeBSD.org (Postfix) with ESMTP id EAF3F43D46 for ; Tue, 26 Oct 2004 06:52:45 +0000 (GMT) (envelope-from whitekid@gmail.com) Received: by wproxy.gmail.com with SMTP id 68so134035wri for ; Mon, 25 Oct 2004 23:52:45 -0700 (PDT) DomainKey-Signature: a=rsa-sha1; q=dns; c=nofws; s=beta; d=gmail.com; h=received:message-id:date:from:reply-to:to:subject:in-reply-to:mime-version:content-type:content-transfer-encoding:references; b=Ogv/mTc/nhGGudbYp0Zjqh+6iTMW9egWrhTR7IV7HCNm5eUyDuTHOCImoqAO3tRJDWZhFmHxK3uTQgA6TsZDyvCX9znvh+mic+2Cs42+zbXFBMzGX5RsnqFEj3+HcAc0hzftn/xuXGkUfL6CH7M4z0fSAzlwWJ7FQgK/L7n7yxU= Received: by 10.38.96.46 with SMTP id t46mr290578rnb; Mon, 25 Oct 2004 23:52:45 -0700 (PDT) Received: by 10.38.96.4 with HTTP; Mon, 25 Oct 2004 23:52:45 -0700 (PDT) Message-ID: <38c00bae04102523527c4717d0@mail.gmail.com> Date: Tue, 26 Oct 2004 15:52:45 +0900 From: "Choe, Cheng-Dae" To: freebsd-gnats-submit@freebsd.org, freebsd-ports-bugs@freebsd.org In-Reply-To: <200410260650.i9Q6oPeo022018@freefall.freebsd.org> Mime-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: quoted-printable References: <200410260646.i9Q6kHEd040608@www.freebsd.org> <200410260650.i9Q6oPeo022018@freefall.freebsd.org> Subject: Re: ports/73149: [New ports]: biology/mpiblast X-BeenThere: freebsd-ports-bugs@freebsd.org X-Mailman-Version: 2.1.1 Precedence: list Reply-To: "Choe, Cheng-Dae" List-Id: Ports bug reports List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 26 Oct 2004 06:52:46 -0000 sorry, previous send-pr don't contains files directory. :) my mistake ^^ here is the right versioin of shar `find mpiblast` ------------ # This is a shell archive. Save it in a file, remove anything before # this line, and then unpack it by entering "sh file". Note, it may # create directories; files and directories will be owned by you and # have default permissions. # # This archive contains: # # mpiblast/Makefile # mpiblast/distinfo # mpiblast/files # mpiblast/pkg-descr # mpiblast/pkg-message # mpiblast/pkg-plist # echo x - mpiblast/Makefile sed 's/^X//' >mpiblast/Makefile << 'END-of-mpiblast/Makefile' X# New ports collection makefile for: mpiblast X# Date created: 23 October 2004 X# Whom: whitekid X# X# $FreeBSD$ X# X XPORTNAME=3D mpiblast XPORTVERSION=3D 1.2.1 XPORTREVISION=3D 0 XCATEGORIES=3D biology parallel XMASTER_SITES=3D http://mpiblast.lanl.gov/releases/ XDISTNAME=3D mpiBLAST-${PORTVERSION} X XMAINTAINER=3D whitekid@gmail.com XCOMMENT=3D A parallelization for NCBI BLAST X XBUILD_DEPENDS=3D ${NONEXISTENT}:${PORTSDIR}/biology/ncbi-toolkit:build \ X ${LOCALBASE}/include/mpi.h:${PORTSDIR}/net/lam X XGNU_CONFIGURE=3D yes X XCONFIGURE_ARGS=3D --with-ncbi=3D${PORTSDIR}/biology/ncbi-toolkit/wo= rk/ncbi X XDOCS=3D AUTHORS COPYING ChangeLog INSTALL LICENSE NEWS README TODO XDATAS=3D WWWBlastWrap.pl X Xpost-install: X @${INSTALL_DATA} ${WRKSRC}/mpiblast.conf ${PREFIX}/etc/mpiblast.conf.sample X X.if !defined(NOPORTDOCS) X @${MKDIR} ${DOCSDIR} X.for file in ${DOCS} X @${INSTALL_DATA} ${WRKSRC}/${file} ${DOCSDIR} X.endfor X X @${MKDIR} ${DATADIR} X.for file in ${DATAS} X @${INSTALL_DATA} ${WRKSRC}/${file} ${DATADIR} X.endfor X.endif X X.include END-of-mpiblast/Makefile echo x - mpiblast/distinfo sed 's/^X//' >mpiblast/distinfo << 'END-of-mpiblast/distinfo' XMD5 (mpiBLAST-1.2.1.tar.gz) =3D 7724f4fbdcecd00d0cc597214efd54e1 XSIZE (mpiBLAST-1.2.1.tar.gz) =3D 170513 END-of-mpiblast/distinfo echo c - mpiblast/files mkdir -p mpiblast/files > /dev/null 2>&1 echo x - mpiblast/pkg-descr sed 's/^X//' >mpiblast/pkg-descr << 'END-of-mpiblast/pkg-descr' XmpiBLAST is a freely available open source parallelization of NCBI BLAST. XmpiBLAST segments the BLAST database and distributes it across cluster nod= es, Xpermitting BLAST queries to be processed on many nodes simultaneously. mpi= BLAST Xis based on MPI. The current release runs under Linux and Windows, and wil= l Xprobably work on other varieties of Unix as well. X XWWW: http://mpiblast.lanl.gov/ END-of-mpiblast/pkg-descr echo x - mpiblast/pkg-message sed 's/^X//' >mpiblast/pkg-message << 'END-of-mpiblast/pkg-message' X-------------------------------------------------------------------------- X XThe mpiBLAST package has been successfully installed. X XNB: A sample configuration file has been installed to %%PREFIX%%/etc as X"mpiblast.conf.sample". This may be renamed to "mpiblast.conf" and edited Xto suit the requirements of a particular site. X XPlease read %%DOCSDIR%%/README file for detail. X X-------------------------------------------------------------------------- END-of-mpiblast/pkg-message echo x - mpiblast/pkg-plist sed 's/^X//' >mpiblast/pkg-plist << 'END-of-mpiblast/pkg-plist' Xbin/mpiblast Xbin/mpiformatdb Xetc/mpiblast.conf Xetc/mpiblast.conf.sample X%%PORTDOCS%%%%DOCSDIR%%/AUTHORS X%%PORTDOCS%%%%DOCSDIR%%/COPYING X%%PORTDOCS%%%%DOCSDIR%%/ChangeLog X%%PORTDOCS%%%%DOCSDIR%%/INSTALL X%%PORTDOCS%%%%DOCSDIR%%/LICENSE X%%PORTDOCS%%%%DOCSDIR%%/NEWS X%%PORTDOCS%%%%DOCSDIR%%/README X%%PORTDOCS%%%%DOCSDIR%%/TODO X%%DATADIR%%/WWWBlastWrap.pl X@dirrm %%DATADIR%% X@dirrm %%DOCSDIR%% END-of-mpiblast/pkg-plist exit --------------------- sorry again. On Tue, 26 Oct 2004 06:50:25 GMT, freebsd-gnats-submit@freebsd.org wrote: > Thank you very much for your problem report. > It has the internal identification `ports/73149'. > The individual assigned to look at your > report is: freebsd-ports-bugs. >=20 > You can access the state of your problem report at any time > via this link: >=20 > http://www.freebsd.org/cgi/query-pr.cgi?pr=3D73149 >=20 > >Category: ports > >Responsible: freebsd-ports-bugs > >Synopsis: [New ports]: biology/mpiblast > >Arrival-Date: Tue Oct 26 06:50:24 GMT 2004 >=20 --=20 Choe, Cheng-Dae(=EC=B5=9C=EC=A0=95=EB=8C=80) Blog: http://www.comdongin.com/