Date: Fri, 15 Dec 2023 12:55:57 GMT From: Muhammad Moinur Rahman <bofh@FreeBSD.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org Subject: git: 5051eb68b916 - main - biology/R-cran-BiocManager: New port Message-ID: <202312151255.3BFCtvO2013953@gitrepo.freebsd.org>
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The branch main has been updated by bofh: URL: https://cgit.FreeBSD.org/ports/commit/?id=5051eb68b9167a5e565a8e24aaa7989f0ea51196 commit 5051eb68b9167a5e565a8e24aaa7989f0ea51196 Author: Muhammad Moinur Rahman <bofh@FreeBSD.org> AuthorDate: 2023-12-15 10:30:16 +0000 Commit: Muhammad Moinur Rahman <bofh@FreeBSD.org> CommitDate: 2023-12-15 12:55:43 +0000 biology/R-cran-BiocManager: New port The BiocManager package, as the modern successor package to BiocInstaller, allows users to install and manage packages from the Bioconductor project. Bioconductor focuses on the statistical analysis and comprehension of high-throughput genomic data. WWW: https://bioconductor.github.io/BiocManager/ --- biology/Makefile | 1 + biology/R-cran-BiocManager/Makefile | 14 ++++++++++++++ biology/R-cran-BiocManager/distinfo | 3 +++ biology/R-cran-BiocManager/pkg-descr | 4 ++++ 4 files changed, 22 insertions(+) diff --git a/biology/Makefile b/biology/Makefile index dc020b1fd61e..cbf07586368b 100644 --- a/biology/Makefile +++ b/biology/Makefile @@ -1,5 +1,6 @@ COMMENT = Biology + SUBDIR += R-cran-BiocManager SUBDIR += abyss SUBDIR += ad2vcf SUBDIR += artemis diff --git a/biology/R-cran-BiocManager/Makefile b/biology/R-cran-BiocManager/Makefile new file mode 100644 index 000000000000..2ecab572d8e4 --- /dev/null +++ b/biology/R-cran-BiocManager/Makefile @@ -0,0 +1,14 @@ +PORTNAME= BiocManager +PORTVERSION= 1.30.22 +CATEGORIES= biology +DISTNAME= ${PORTNAME}_${PORTVERSION} + +MAINTAINER= bofh@FreeBSD.org +COMMENT= Convenient tool to install and update Bioconductor packages +WWW= https://cran.r-project.org/web/packages/BiocManager/ + +LICENSE= ART20 + +USES= cran:auto-plist,compiles + +.include <bsd.port.mk> diff --git a/biology/R-cran-BiocManager/distinfo b/biology/R-cran-BiocManager/distinfo new file mode 100644 index 000000000000..e007f57ce45d --- /dev/null +++ b/biology/R-cran-BiocManager/distinfo @@ -0,0 +1,3 @@ +TIMESTAMP = 1702634634 +SHA256 (BiocManager_1.30.22.tar.gz) = 5389c9c0d6562b0757659fb8262ab51b48225c4ba7e9acd4f5e7c0049735e835 +SIZE (BiocManager_1.30.22.tar.gz) = 582690 diff --git a/biology/R-cran-BiocManager/pkg-descr b/biology/R-cran-BiocManager/pkg-descr new file mode 100644 index 000000000000..bd8a1376348c --- /dev/null +++ b/biology/R-cran-BiocManager/pkg-descr @@ -0,0 +1,4 @@ +The BiocManager package, as the modern successor package to BiocInstaller, +allows users to install and manage packages from the Bioconductor project. +Bioconductor focuses on the statistical analysis and comprehension of +high-throughput genomic data.
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