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Sat, 6 Apr 2024 01:04:57 GMT (envelope-from git) Date: Sat, 6 Apr 2024 01:04:57 GMT Message-Id: <202404060104.43614vWO083328@gitrepo.freebsd.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org From: Yuri Victorovich Subject: git: 74f10ca31e56 - main - biology/py-scikit-bio: update 0.5.9 =?utf-8?Q?=E2=86=92?= 0.6.0 List-Id: Commit messages for all branches of the ports repository List-Archive: https://lists.freebsd.org/archives/dev-commits-ports-all List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-dev-commits-ports-all@freebsd.org X-BeenThere: dev-commits-ports-all@freebsd.org MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 8bit X-Git-Committer: yuri X-Git-Repository: ports X-Git-Refname: refs/heads/main X-Git-Reftype: branch X-Git-Commit: 74f10ca31e56a14e62fd5b4d5d8ca335030d5fdd Auto-Submitted: auto-generated The branch main has been updated by yuri: URL: https://cgit.FreeBSD.org/ports/commit/?id=74f10ca31e56a14e62fd5b4d5d8ca335030d5fdd commit 74f10ca31e56a14e62fd5b4d5d8ca335030d5fdd Author: Yuri Victorovich AuthorDate: 2024-04-06 01:03:07 +0000 Commit: Yuri Victorovich CommitDate: 2024-04-06 01:04:46 +0000 biology/py-scikit-bio: update 0.5.9 → 0.6.0 Reported by: portscout --- biology/py-scikit-bio/Makefile | 7 ++++--- biology/py-scikit-bio/distinfo | 6 +++--- 2 files changed, 7 insertions(+), 6 deletions(-) diff --git a/biology/py-scikit-bio/Makefile b/biology/py-scikit-bio/Makefile index 84fad483a3f0..03e22bd69308 100644 --- a/biology/py-scikit-bio/Makefile +++ b/biology/py-scikit-bio/Makefile @@ -1,5 +1,5 @@ PORTNAME= scikit-bio -DISTVERSION= 0.5.9 +DISTVERSION= 0.6.0 CATEGORIES= biology education python MASTER_SITES= PYPI PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} @@ -16,17 +16,18 @@ BROKEN_aarch64= fails to build: invalid conversion between vector type '__m64' ( BUILD_DEPENDS= ${PYNUMPY} \ ${PY_SETUPTOOLS} \ ${PYTHON_PKGNAMEPREFIX}wheel>0:devel/py-wheel@${PY_FLAVOR} -RUN_DEPENDS= ${PYNUMPY} \ +RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}biom-format>0:biology/py-biom-format@${PY_FLAVOR} \ ${PYTHON_PKGNAMEPREFIX}decorator>=3.4.2:devel/py-decorator@${PY_FLAVOR} \ ${PYTHON_PKGNAMEPREFIX}h5py>=3.6.0:science/py-h5py@${PY_FLAVOR} \ ${PYTHON_PKGNAMEPREFIX}hdmedians>=0.14.1:math/py-hdmedians@${PY_FLAVOR} \ ${PYTHON_PKGNAMEPREFIX}ipython>=3.2.0:devel/ipython@${PY_FLAVOR} \ ${PYTHON_PKGNAMEPREFIX}matplotlib>=1.4.3:math/py-matplotlib@${PY_FLAVOR} \ ${PYTHON_PKGNAMEPREFIX}natsort>=4.0.3:devel/py-natsort@${PY_FLAVOR} \ + ${PYNUMPY} \ ${PYTHON_PKGNAMEPREFIX}pandas>=1.5.0:math/py-pandas@${PY_FLAVOR} \ ${PYTHON_PKGNAMEPREFIX}requests>=2.20.0:www/py-requests@${PY_FLAVOR} \ ${PYTHON_PKGNAMEPREFIX}scikit-learn>=0.19.1:science/py-scikit-learn@${PY_FLAVOR} \ - ${PYTHON_PKGNAMEPREFIX}scipy>0:science/py-scipy@${PY_FLAVOR} + ${PYTHON_PKGNAMEPREFIX}scipy>=1.9.0:science/py-scipy@${PY_FLAVOR} USES= python USE_PYTHON= pep517 cython autoplist pytest # tests fail to run, see https://github.com/biocore/scikit-bio/issues/1846 diff --git a/biology/py-scikit-bio/distinfo b/biology/py-scikit-bio/distinfo index d65c97d3f9c3..558a18b5c5f1 100644 --- a/biology/py-scikit-bio/distinfo +++ b/biology/py-scikit-bio/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1691038332 -SHA256 (scikit-bio-0.5.9.tar.gz) = 7ae044dc8bee231900248adc3a8659077e76140d56ac9f42bd01fb7981014910 -SIZE (scikit-bio-0.5.9.tar.gz) = 3542513 +TIMESTAMP = 1712349674 +SHA256 (scikit-bio-0.6.0.tar.gz) = 10105a7c3c15ae5910244927f29ba7aa35234b19ebe6513b8484547343b2c10f +SIZE (scikit-bio-0.6.0.tar.gz) = 1739407