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Subject: [Bug 208943] biology/bowtie2: upgrade to 2.2.8
Date: Thu, 21 Apr 2016 00:38:46 +0000
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https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D208943

            Bug ID: 208943
           Summary: biology/bowtie2: upgrade to 2.2.8
           Product: Ports & Packages
           Version: Latest
          Hardware: Any
                OS: Any
            Status: New
          Severity: Affects Only Me
          Priority: ---
         Component: Individual Port(s)
          Assignee: freebsd-ports-bugs@FreeBSD.org
          Reporter: jrm@ftfl.ca
                CC: bacon4000@gmail.com
                CC: bacon4000@gmail.com
             Flags: maintainer-feedback?(bacon4000@gmail.com)

Created attachment 169505
  --> https://bugs.freebsd.org/bugzilla/attachment.cgi?id=3D169505&action=
=3Dedit
svn patch to upgrade biology/bowtie2 to version 2.2.8

portlint: OK
testport: OK (poudriere: 9.3-RELEASE-p30,  amd64 [1])
testport: OK (poudriere: 10.3-RELEASE,     amd64 [2])

[1]
http://pkg.awarnach.mathstat.dal.ca/data/103amd64-default/2016-04-20_21h26m=
07s/logs/bowtie2-2.2.8.log

[2]
http://pkg.awarnach.mathstat.dal.ca/data/9amd64-default/2016-04-20_21h22m58=
s/logs/bowtie2-2.2.8.log

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