Date: Thu, 19 Nov 2009 03:00:19 +0900 From: KATO Tsuguru <tkato432@yahoo.com> To: FreeBSD-gnats-submit@FreeBSD.org Subject: ports/140672: Update port: graphics/raster3d to 2.7s Message-ID: <20091119030019.35e02cca.tkato432@yahoo.com> Resent-Message-ID: <200911181810.nAIIA3qt035602@freefall.freebsd.org>
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>Number: 140672 >Category: ports >Synopsis: Update port: graphics/raster3d to 2.7s >Confidential: no >Severity: non-critical >Priority: low >Responsible: freebsd-ports-bugs >State: open >Quarter: >Keywords: >Date-Required: >Class: change-request >Submitter-Id: current-users >Arrival-Date: Wed Nov 18 18:10:02 UTC 2009 >Closed-Date: >Last-Modified: >Originator: KATO Tsuguru >Release: FreeBSD 7.2-RELEASE-p4 i386 >Organization: >Environment: >Description: - Update to version 2.7s >How-To-Repeat: >Fix: diff -urN /usr/ports/graphics/raster3d/Makefile graphics/raster3d/Makefile --- /usr/ports/graphics/raster3d/Makefile 2009-11-12 16:36:23.000000000 +0900 +++ graphics/raster3d/Makefile 2009-11-17 05:33:42.000000000 +0900 @@ -6,11 +6,10 @@ # PORTNAME= raster3d -DISTVERSION= 2.7d -PORTREVISION= 2 +PORTVERSION= 2.7s CATEGORIES= graphics biology MASTER_SITES= http://skuld.bmsc.washington.edu/${PORTNAME}/ -DISTNAME= Raster3D_${DISTVERSION} +DISTNAME= Raster3D_${PORTVERSION} MAINTAINER= ports@FreeBSD.org COMMENT= A set of tools for generating raster images of proteins and molecules @@ -18,55 +17,62 @@ LIB_DEPENDS= png.5:${PORTSDIR}/graphics/png \ tiff.4:${PORTSDIR}/graphics/tiff -BINARIES= avs2ps balls rastep render ribbon rings3d rods normal3d -SCRIPTS= label3d stereo3d +OPTIONS= IMAGEMAGICK "ImageMagick graphics support" on -USE_FORTRAN= g77 +USE_FORTRAN= yes +MAKE_ENV= CC="${CC}" CFLAGS="${CFLAGS}" FC="${FC}" FFLAGS="${FFLAGS}" \ + RM="${RM}" OS="${OPSYS}" +ALL_TARGET= strip-for-g77 all -.if !defined(WITHOUT_IMAGEMAGICK) +MANL= avs2ps.l balls.l label3d.l r3d_objects.l r3dtops.l rastep.l \ + raster3d.l render.l ribbon.l rods.l normal3d.l stereo3d.l + +CFLAGS+= -DLINUX -DNETWORKBYTEORDER +FFLAGS+= -fno-range-check + +.include <bsd.port.pre.mk> + +.if ${OSVERSION} >= 700042 +.if ${ARCH} == "sparc64" +BROKEN= Does not compile with GCC 4.2: internal compiler error +.endif +.endif + +.if defined(WITHOUT_IMAGEMAGICK) +PLIST_SUB+= IMAGEMAGICK="@comment " +.else RUN_DEPENDS= convert:${PORTSDIR}/graphics/ImageMagick +CFLAGS+= -DIMAGEPIPE PLIST_SUB+= IMAGEMAGICK="" -.else -PLIST_SUB+= IMAGEMAGICK="@comment " .endif -MANL= avs2ps.l label3d.l r3d_objects.l rastep.l render.l rods.l \ - balls.l normal3d.l r3dtops.l raster3d.l ribbon.l stereo3d.l - -pre-build: - @cd ${WRKSRC} && ${SETENV} ${MAKE_ENV} ${MAKE} freebsd - @${REINPLACE_CMD} -e 's#prefix#PREFIX#g' \ - -e 's#^LIBDIRS.*=.*#LIBDIRS = -L${LOCALBASE}/lib#g' \ - -e 's#^INCDIRS.*=.*#INCDIRS = -I/usr/include -I${LOCALBASE}/include#g' \ - ${WRKSRC}/Makefile* +do-configure: + @cd ${WRKSRC}; ${SED} 's:^prefix.*$$:prefix = ${PREFIX}:g ; \ + s:^INCDIRS.*$$:INCDIRS = -I${LOCALBASE}/include:g ; \ + s:^LIBDIRS.*$$:LIBDIRS = -L${LOCALBASE}/lib:g ; \ + s:IDEFS:#IDEFS:g' Makefile.template > Makefile.incl do-install: - cd ${WRKSRC} && ${INSTALL_PROGRAM} ${BINARIES} ${PREFIX}/bin +.for file in avs2ps balls normal3d rastep render ribbon rings3d rods + cd ${WRKSRC} && ${INSTALL_PROGRAM} ${file} ${PREFIX}/bin +.endfor .if !defined(WITHOUT_IMAGEMAGICK) - cd ${WRKSRC} && ${INSTALL_SCRIPT} ${SCRIPTS} ${PREFIX}/bin +.for file in label3d stereo3d + cd ${WRKSRC} && ${INSTALL_SCRIPT} ${file} ${PREFIX}/bin +.endfor .endif + cd ${WRKSRC}/doc && ${INSTALL_MAN} ${MANL} ${MANLPREFIX}/man/manl @${MKDIR} ${DATADIR}/materials cd ${WRKSRC}/materials && ${INSTALL_DATA} * ${DATADIR}/materials - - cd ${WRKSRC}/doc && ${INSTALL_MAN} ${MANL} ${MANLPREFIX}/man/manl - -post-install: .if !defined(NOPORTDOCS) @${MKDIR} ${DOCSDIR}/html cd ${WRKSRC}/doc && ${INSTALL_DATA} R3D_manual.pdf ${DOCSDIR} cd ${WRKSRC}/html && ${INSTALL_DATA} * ${DOCSDIR}/html - +.endif +.if !defined(NOPORTEXAMPLES) @${MKDIR} ${EXAMPLESDIR}/msms cd ${WRKSRC}/examples && ${INSTALL_DATA} *.* ${EXAMPLESDIR} cd ${WRKSRC}/examples/msms && ${INSTALL_DATA} * ${EXAMPLESDIR}/msms .endif -.include <bsd.port.pre.mk> - -.if ${OSVERSION} >= 700042 -.if ${ARCH} == "sparc64" -BROKEN= Does not compile with GCC 4.2: internal compiler error -.endif -.endif - .include <bsd.port.post.mk> diff -urN /usr/ports/graphics/raster3d/distinfo graphics/raster3d/distinfo --- /usr/ports/graphics/raster3d/distinfo 2006-08-17 02:53:31.000000000 +0900 +++ graphics/raster3d/distinfo 2009-11-17 04:08:23.000000000 +0900 @@ -1,3 +1,3 @@ -MD5 (Raster3D_2.7d.tar.gz) = 30b284037b0138d328ab1b43328549e6 -SHA256 (Raster3D_2.7d.tar.gz) = b784e0a96679791adc7db2b1767a1011ef742380ee4fc783ecae9971a251eca1 -SIZE (Raster3D_2.7d.tar.gz) = 1724473 +MD5 (Raster3D_2.7s.tar.gz) = bc35e375f6fda5bf5f29c69281e533de +SHA256 (Raster3D_2.7s.tar.gz) = a5952a26ece4af67ac0b4331601e639055cdafb5622aa778779cd15feb071a1a +SIZE (Raster3D_2.7s.tar.gz) = 1724766 diff -urN /usr/ports/graphics/raster3d/pkg-plist graphics/raster3d/pkg-plist --- /usr/ports/graphics/raster3d/pkg-plist 2006-04-28 23:20:45.000000000 +0900 +++ graphics/raster3d/pkg-plist 2009-11-17 05:34:56.000000000 +0900 @@ -57,47 +57,47 @@ %%PORTDOCS%%%%DOCSDIR%%/html/rods.html %%PORTDOCS%%%%DOCSDIR%%/html/stereo3d.html %%PORTDOCS%%%%DOCSDIR%%/R3D_manual.pdf -%%PORTDOCS%%%%EXAMPLESDIR%%/msms/README -%%PORTDOCS%%%%EXAMPLESDIR%%/msms/msms2r3d.c -%%PORTDOCS%%%%EXAMPLESDIR%%/msms/msms_example.script -%%PORTDOCS%%%%EXAMPLESDIR%%/LT.pdb -%%PORTDOCS%%%%EXAMPLESDIR%%/README.examples -%%PORTDOCS%%%%EXAMPLESDIR%%/chaincolours.pdb -%%PORTDOCS%%%%EXAMPLESDIR%%/clip.r3d -%%PORTDOCS%%%%EXAMPLESDIR%%/ex5.jpeg -%%PORTDOCS%%%%EXAMPLESDIR%%/ex5_matrix.r3d -%%PORTDOCS%%%%EXAMPLESDIR%%/ex7_header.r3d -%%PORTDOCS%%%%EXAMPLESDIR%%/ex7_helix.r3d -%%PORTDOCS%%%%EXAMPLESDIR%%/ex7_labels.r3d -%%PORTDOCS%%%%EXAMPLESDIR%%/ex7_tex.r3d -%%PORTDOCS%%%%EXAMPLESDIR%%/ex7_titles.r3d -%%PORTDOCS%%%%EXAMPLESDIR%%/example1.r3d -%%PORTDOCS%%%%EXAMPLESDIR%%/example1.script -%%PORTDOCS%%%%EXAMPLESDIR%%/example2.script -%%PORTDOCS%%%%EXAMPLESDIR%%/example2.sgi -%%PORTDOCS%%%%EXAMPLESDIR%%/example3.mol -%%PORTDOCS%%%%EXAMPLESDIR%%/example3.r3d -%%PORTDOCS%%%%EXAMPLESDIR%%/example3.script -%%PORTDOCS%%%%EXAMPLESDIR%%/example4.script -%%PORTDOCS%%%%EXAMPLESDIR%%/example5.r3d -%%PORTDOCS%%%%EXAMPLESDIR%%/example5.script -%%PORTDOCS%%%%EXAMPLESDIR%%/example6.r3d -%%PORTDOCS%%%%EXAMPLESDIR%%/example6.script -%%PORTDOCS%%%%EXAMPLESDIR%%/example7.jpeg -%%PORTDOCS%%%%EXAMPLESDIR%%/example7.r3d -%%PORTDOCS%%%%EXAMPLESDIR%%/example7.script -%%PORTDOCS%%%%EXAMPLESDIR%%/example8.script -%%PORTDOCS%%%%EXAMPLESDIR%%/example9.script -%%PORTDOCS%%%%EXAMPLESDIR%%/gal_srf.r3d.gz -%%PORTDOCS%%%%EXAMPLESDIR%%/header1.r3d -%%PORTDOCS%%%%EXAMPLESDIR%%/header2.r3d -%%PORTDOCS%%%%EXAMPLESDIR%%/header4.r3d -%%PORTDOCS%%%%EXAMPLESDIR%%/header8.r3d -%%PORTDOCS%%%%EXAMPLESDIR%%/plane.r3d -%%PORTDOCS%%%%EXAMPLESDIR%%/sugarG.pdb -%%PORTDOCS%%%%EXAMPLESDIR%%/sugarcolours.pdb -%%PORTDOCS%%%%EXAMPLESDIR%%/sugars.pdb -%%PORTDOCS%%%%EXAMPLESDIR%%/transparent.r3d +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/msms/README +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/msms/msms2r3d.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/msms/msms_example.script +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/LT.pdb +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/README.examples +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/chaincolours.pdb +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/clip.r3d +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/ex5.jpeg +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/ex5_matrix.r3d +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/ex7_header.r3d +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/ex7_helix.r3d +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/ex7_labels.r3d +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/ex7_tex.r3d +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/ex7_titles.r3d +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/example1.r3d +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/example1.script +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/example2.script +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/example2.sgi +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/example3.mol +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/example3.r3d +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/example3.script +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/example4.script +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/example5.r3d +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/example5.script +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/example6.r3d +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/example6.script +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/example7.jpeg +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/example7.r3d +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/example7.script +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/example8.script +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/example9.script +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/gal_srf.r3d.gz +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/header1.r3d +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/header2.r3d +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/header4.r3d +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/header8.r3d +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/plane.r3d +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/sugarG.pdb +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/sugarcolours.pdb +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/sugars.pdb +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/transparent.r3d %%DATADIR%%/materials/2-sided.r3d %%DATADIR%%/materials/backdrop_1.r3d %%DATADIR%%/materials/backdrop_2.r3d @@ -149,9 +149,9 @@ %%DATADIR%%/materials/transparent1.r3d %%DATADIR%%/materials/white.r3d %%DATADIR%%/materials/yellow.r3d -%%PORTDOCS%%@dirrm %%EXAMPLESDIR%%/msms -%%PORTDOCS%%@dirrm %%EXAMPLESDIR%% -%%PORTDOCS%%@dirrm %%DOCSDIR%%/html -%%PORTDOCS%%@dirrm %%DOCSDIR%% @dirrm %%DATADIR%%/materials @dirrm %%DATADIR%% +%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/msms +%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%% +%%PORTDOCS%%@dirrm %%DOCSDIR%%/html +%%PORTDOCS%%@dirrm %%DOCSDIR%% >Release-Note: >Audit-Trail: >Unformatted:
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