From nobody Fri Jan 5 09:38:30 2024 X-Original-To: dev-commits-ports-all@mlmmj.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mlmmj.nyi.freebsd.org (Postfix) with ESMTP id 4T5z0k43K3z56f8k; Fri, 5 Jan 2024 09:38:30 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256 client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "R3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 4T5z0k2Vm5z4F08; Fri, 5 Jan 2024 09:38:30 +0000 (UTC) (envelope-from git@FreeBSD.org) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1704447510; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type: content-transfer-encoding:content-transfer-encoding; bh=n4/bauwEBd847RFU0iIi5UNbtD3gpzOtI7ggxWOEfB8=; b=NNM1PN7ml4F5qUpvDsynRBAd+EiZKVTQNJDpwxK8F4YOn51Z+JQj0IdrsFM2cvB4zRL7vV luncMjZFVHDAh1Zvky4052g4+g9RUytlGGc1dJexxyPBkJ9YYsQ3fECm5k4wCllZ3Ej2og nuS63HS6Q4qtVmF+GXjgRFwisDtsiYOey29rD9VXOih09u/L2xWeiC+02vqCsp4Q1ciRH4 M83ZFzwIU7EX86KCXl/vN3uyXwoB33lM5mEkJqHYwdmXISvdYeLuHqr9HeDjl9/NJuY1CB HtBMftHO5yuGdoGRVdFYhYdG3AO5A+QH1Mod1aJVF8FpqXc/iJJOYNTiBHA8kQ== ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1704447510; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type: content-transfer-encoding:content-transfer-encoding; bh=n4/bauwEBd847RFU0iIi5UNbtD3gpzOtI7ggxWOEfB8=; b=oJgTHxeefEaeJt1/eHA2vJMEkd62bgxy21QkG5oESZ8iukLyb0tqDylYcqpCDQYqWvL1tE kznSQEKA5LNOdzkeUiUF8qpxhSLtvGGZYq0qSe3HgKsJ1quqaNSk+zpDielrT0UxZ+DRyE qu6+dlzXytS142JkVpexpWNxZXN9712tQuHUvkYlKldpxb8Kj8RKAwrmXn24ua5dShafdq eo9zqmrx3bYWwl3WvatwIJtgkEuOwjFXJa+9KPoxLE4E40nYQLdFbPIN+QwnWBO9JvTC4D rCzjmD/Aa4LyOFEqDem3iWmi2PDuoGX0aJVCz5i+KZcPqJP00LvkNaZsFHZw/A== ARC-Authentication-Results: i=1; mx1.freebsd.org; none ARC-Seal: i=1; s=dkim; d=freebsd.org; t=1704447510; a=rsa-sha256; cv=none; b=eAhQYhIUge2RY8/F9Gspgk5zHTGhmvTXZKjQE2xMtJcfdrOTOh6e+0A6ii8unJ127ynnrd y3rllu+OpEobeRz0/f3dwwYyV0kYkXUFPQWoR1MFT4K49x4MIJ/aowm50Yxff9t5pcKIwg tJkKeSfAtpajVQJywXTj/BvzyB5fmTgSvk9XLqMg5HrRqYfHe3EOB0X6Ra+RUCp1BG6S1E sH8lFZr5UPR40DYd9pDCZ0Wm3gRRrXl/ZpDXzFqxNKC+FVYJo4psj9CHM8BPFY+QqHN0th k1WHMYyE5904yGCuajHgJ1oQFcn52xg5xMmei6KubqM4XJoh/GTUH4ER+/Lg5A== Received: from gitrepo.freebsd.org (gitrepo.freebsd.org [IPv6:2610:1c1:1:6068::e6a:5]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id 4T5z0k1crKzsB8; Fri, 5 Jan 2024 09:38:30 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from gitrepo.freebsd.org ([127.0.1.44]) by gitrepo.freebsd.org (8.17.1/8.17.1) with ESMTP id 4059cUiX050105; Fri, 5 Jan 2024 09:38:30 GMT (envelope-from git@gitrepo.freebsd.org) Received: (from git@localhost) by gitrepo.freebsd.org (8.17.1/8.17.1/Submit) id 4059cU6c050102; Fri, 5 Jan 2024 09:38:30 GMT (envelope-from git) Date: Fri, 5 Jan 2024 09:38:30 GMT Message-Id: <202401050938.4059cU6c050102@gitrepo.freebsd.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org From: Yuri Victorovich Subject: git: 618bc62b2d14 - main - biology/mashmap: update 3.1.2 =?utf-8?Q?=E2=86=92?= 3.1.3 List-Id: Commit messages for all branches of the ports repository List-Archive: https://lists.freebsd.org/archives/dev-commits-ports-all List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-dev-commits-ports-all@freebsd.org X-BeenThere: dev-commits-ports-all@freebsd.org MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 8bit X-Git-Committer: yuri X-Git-Repository: ports X-Git-Refname: refs/heads/main X-Git-Reftype: branch X-Git-Commit: 618bc62b2d14f1302928764a35a96f278847c90d Auto-Submitted: auto-generated The branch main has been updated by yuri: URL: https://cgit.FreeBSD.org/ports/commit/?id=618bc62b2d14f1302928764a35a96f278847c90d commit 618bc62b2d14f1302928764a35a96f278847c90d Author: Yuri Victorovich AuthorDate: 2024-01-05 09:34:08 +0000 Commit: Yuri Victorovich CommitDate: 2024-01-05 09:38:15 +0000 biology/mashmap: update 3.1.2 → 3.1.3 --- biology/mashmap/Makefile | 7 +++++-- biology/mashmap/distinfo | 6 +++--- 2 files changed, 8 insertions(+), 5 deletions(-) diff --git a/biology/mashmap/Makefile b/biology/mashmap/Makefile index ab77f63f41c4..eaaca49903b5 100644 --- a/biology/mashmap/Makefile +++ b/biology/mashmap/Makefile @@ -1,6 +1,6 @@ PORTNAME= mashmap DISTVERSIONPREFIX= v -DISTVERSION= 3.1.2 +DISTVERSION= 3.1.3 CATEGORIES= biology MAINTAINER= yuri@FreeBSD.org @@ -16,12 +16,15 @@ BROKEN_powerpc= compilation fails: fatal error: unknown type name '__uint128_t' LIB_DEPENDS= libgsl.so:math/gsl \ libhts.so:biology/htslib -USES= cmake compiler:c++17-lang localbase:ldflags +USES= cmake compiler:c++17-lang localbase:ldflags pkgconfig USE_GITHUB= yes GH_ACCOUNT= marbl GH_PROJECT= MashMap +CMAKE_ON= USE_HTSLIB +CMAKE_OFF= OPTIMIZE_FOR_NATIVE + OPTIONS_DEFINE= NATIVE NATIVE_CMAKE_BOOL= OPTIMIZE_FOR_NATIVE diff --git a/biology/mashmap/distinfo b/biology/mashmap/distinfo index 9e6f5286225b..8830cb134d4f 100644 --- a/biology/mashmap/distinfo +++ b/biology/mashmap/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1701829049 -SHA256 (marbl-MashMap-v3.1.2_GH0.tar.gz) = cf9bb085cc85b0f1b91f4fc45a907cff536099a4a82031f1e112259e24ba5976 -SIZE (marbl-MashMap-v3.1.2_GH0.tar.gz) = 25919468 +TIMESTAMP = 1704429274 +SHA256 (marbl-MashMap-v3.1.3_GH0.tar.gz) = 7719dd6b3c25e650e16218252eaae7dbf424a10890d717ec3ad0920b102fd05a +SIZE (marbl-MashMap-v3.1.3_GH0.tar.gz) = 25919699