Date: Sun, 3 May 2020 02:08:20 +0000 (UTC) From: Joseph Mingrone <jrm@FreeBSD.org> To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r533731 - head/biology/hyphy Message-ID: <202005030208.04328K6C066991@repo.freebsd.org>
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Author: jrm Date: Sun May 3 02:08:19 2020 New Revision: 533731 URL: https://svnweb.freebsd.org/changeset/ports/533731 Log: biology/hyphy: Update to version 2.5.12 Upstream changes: https://github.com/veg/hyphy/releases/tag/2.5.11 https://github.com/veg/hyphy/releases/tag/2.5.12 Modified: head/biology/hyphy/Makefile (contents, props changed) head/biology/hyphy/distinfo (contents, props changed) head/biology/hyphy/pkg-plist (contents, props changed) Modified: head/biology/hyphy/Makefile ============================================================================== --- head/biology/hyphy/Makefile Sun May 3 01:43:11 2020 (r533730) +++ head/biology/hyphy/Makefile Sun May 3 02:08:19 2020 (r533731) @@ -1,7 +1,7 @@ # $FreeBSD$ PORTNAME= hyphy -DISTVERSION= 2.5.10 +DISTVERSION= 2.5.12 CATEGORIES= biology MAINTAINER= jrm@FreeBSD.org Modified: head/biology/hyphy/distinfo ============================================================================== --- head/biology/hyphy/distinfo Sun May 3 01:43:11 2020 (r533730) +++ head/biology/hyphy/distinfo Sun May 3 02:08:19 2020 (r533731) @@ -1,3 +1,3 @@ -TIMESTAMP = 1587774446 -SHA256 (veg-hyphy-2.5.10_GH0.tar.gz) = 73e5bfa6a00dfcbe4cc7fd193d2eaa7273b6de62546992dfa19673a969e464fe -SIZE (veg-hyphy-2.5.10_GH0.tar.gz) = 6104280 +TIMESTAMP = 1588470249 +SHA256 (veg-hyphy-2.5.12_GH0.tar.gz) = ed3659371806efb6542d53ed149758a005884428fc94a27b51f897381368853f +SIZE (veg-hyphy-2.5.12_GH0.tar.gz) = 6099625 Modified: head/biology/hyphy/pkg-plist ============================================================================== --- head/biology/hyphy/pkg-plist Sun May 3 01:43:11 2020 (r533730) +++ head/biology/hyphy/pkg-plist Sun May 3 02:08:19 2020 (r533731) @@ -176,7 +176,6 @@ lib/hyphy/TemplateBatchFiles/SandNSAmbigs.bf lib/hyphy/TemplateBatchFiles/SelectionAnalyses/BUSTED.bf lib/hyphy/TemplateBatchFiles/SelectionAnalyses/BranchSiteREL.bf lib/hyphy/TemplateBatchFiles/SelectionAnalyses/FADE.bf -lib/hyphy/TemplateBatchFiles/SelectionAnalyses/FEL-contrast.bf lib/hyphy/TemplateBatchFiles/SelectionAnalyses/FEL.bf lib/hyphy/TemplateBatchFiles/SelectionAnalyses/FUBAR.bf lib/hyphy/TemplateBatchFiles/SelectionAnalyses/MEME.bf @@ -187,6 +186,7 @@ lib/hyphy/TemplateBatchFiles/SelectionAnalyses/RELAX.b lib/hyphy/TemplateBatchFiles/SelectionAnalyses/SLAC.bf lib/hyphy/TemplateBatchFiles/SelectionAnalyses/SingleOmega.bf lib/hyphy/TemplateBatchFiles/SelectionAnalyses/aBSREL.bf +lib/hyphy/TemplateBatchFiles/SelectionAnalyses/contrast-fel.bf lib/hyphy/TemplateBatchFiles/SelectionAnalyses/modules/grid_compute.ibf lib/hyphy/TemplateBatchFiles/SelectionAnalyses/modules/io_functions.ibf lib/hyphy/TemplateBatchFiles/SelectionAnalyses/modules/selection_lib.ibf
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