Date: Sun, 23 Feb 2020 02:20:15 GMT From: pkg-fallout@FreeBSD.org To: pkg-fallout@FreeBSD.org Subject: [package - 120armv7-quarterly][science/avogadrolibs] Failed for avogadrolibs-1.92.1_1 in build Message-ID: <202002230220.01N2KFQr018866@beefy13.nyi.freebsd.org>
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Maintainer: yuri@FreeBSD.org Last committer: gerald@FreeBSD.org Ident: $FreeBSD: branches/2020Q1/science/avogadrolibs/Makefile 507372 2019-07-26 20:46:53Z gerald $ Log URL: http://beefy13.nyi.freebsd.org/data/120armv7-quarterly/526780/logs/avogadrolibs-1.92.1_1.log Build URL: http://beefy13.nyi.freebsd.org/build.html?mastername=120armv7-quarterly&build=526780 Log: =>> Building science/avogadrolibs build started at Sun Feb 23 02:12:12 UTC 2020 port directory: /usr/ports/science/avogadrolibs package name: avogadrolibs-1.92.1_1 building for: FreeBSD 120armv7-quarterly-job-06 12.0-RELEASE-p13 FreeBSD 12.0-RELEASE-p13 1200086 arm maintained by: yuri@FreeBSD.org Makefile ident: $FreeBSD: branches/2020Q1/science/avogadrolibs/Makefile 507372 2019-07-26 20:46:53Z gerald $ Poudriere version: 3.2.8-5-gc81843e5 Host OSVERSION: 1300076 Jail OSVERSION: 1200086 Job Id: 06 ---Begin Environment--- SHELL=/bin/csh UNAME_p=armv7 UNAME_m=arm ABI_FILE=/usr/lib/crt1.o OSVERSION=1200086 UNAME_v=FreeBSD 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---Begin make.conf--- .sinclude "/etc/make.nxb.conf" USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes MACHINE=arm MACHINE_ARCH=armv7 ARCH=${MACHINE_ARCH} #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. 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[120armv7-quarterly-job-06] Extracting pkg-1.12.0_1: .......... done ===> avogadrolibs-1.92.1_1 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of avogadrolibs-1.92.1_1 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by avogadrolibs-1.92.1_1 for building =========================================================================== =======================<phase: checksum >============================ ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by avogadrolibs-1.92.1_1 for building => SHA256 Checksum OK for OpenChemistry-avogadrolibs-1.92.1_GH0.tar.gz. <snip> /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1/avogadro/rendering/drawable.h:92:16: note: overridden virtual function is here virtual void render(const Camera& camera); ^ In file included from /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1/avogadro/qtplugins/force/force.cpp:21: /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1/avogadro/rendering/arrowgeometry.h:59:8: warning: 'clear' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void clear(); ^ /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1/avogadro/rendering/drawable.h:115:16: note: overridden virtual function is here virtual void clear(); ^ 2 warnings generated. [172/458] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/force/Force_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/force -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/force/CMakeFiles/Force.dir/ForcePlugin.cpp.o -MF av 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avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/Meshes_autogen/mocs_compilation.cpp.o -c avogadro/qtplugins/meshes/Meshes_autogen/mocs_compilation.cpp [176/458] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/meshes/Meshes_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/meshes -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include 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-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/MeshesPlugin.cpp.o -MF avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/MeshesPlugin.cpp.o.d -o avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/MeshesPlugin.cpp.o -c avogadro/qtplugins/meshes/MeshesPlugin.cpp [178/458] : && /usr/local/bin/cmake -E remove lib/avogadro2/staticplugins/Meshes.a && /nxb-bin/usr/bin/ar qc lib/avogadro2/staticplugins/Meshes.a avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/Meshes_autogen/mocs_compilation.cpp.o avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/meshes.cpp.o avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/MeshesPlugin.cpp.o && /nxb-bin/usr/bin/ranlib lib/avogadro2/staticplugins/Meshes.a && : [179/458] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/overlayaxes && /usr/local/bin/cmake -E cmake_autogen /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen.dir/AutogenInfo.cmake Release [180/458] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/overlayaxes/OverlayAxes_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/overlayaxes -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxe s.dir/OverlayAxes_autogen/mocs_compilation.cpp.o -MF avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes.dir/OverlayAxes_autogen/mocs_compilation.cpp.o.d -o avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes.dir/OverlayAxes_autogen/mocs_compilation.cpp.o -c avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/mocs_compilation.cpp [181/458] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/overlayaxes/OverlayAxes_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/overlayaxes 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-I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/spectra -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/vibrationdialo g.cpp.o -MF avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/vibrationdialog.cpp.o.d -o avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/vibrationdialog.cpp.o -c 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-fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -i system /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/zipextracter.cpp.o -MF avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/zipextracter.cpp.o.d -o avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/zipextracter.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1/avogadro/qtplugins/plugindownloader/zipextracter.cpp [219/458] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/plugindownloader/PluginDownloader_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/plugindownloader -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1/thirdparty -isystem /usr/local/include/qt5/QtNetwork -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -i system /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/PluginDownloaderPlugin.cpp.o -MF avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/PluginDownloaderPlugin.cpp.o.d -o avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/PluginDownloaderPlugin.cpp.o -c avogadro/qtplugins/plugindownloader/PluginDownloaderPlugin.cpp [220/458] : && /usr/local/bin/cmake -E remove lib/avogadro2/staticplugins/PluginDownloader.a && /nxb-bin/usr/bin/ar qc lib/avogadro2/staticplugins/PluginDownloader.a avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/PluginDownloader_autogen/mocs_compilation.cpp.o avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/plugindownloader.cpp.o avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/downloaderwidget.cpp.o avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/zipextracter.cpp.o avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/PluginDownloaderPlugin.cpp.o && /nxb-bin/usr/bin/ranlib lib/avogadro2/staticplugins/PluginDownloader.a && : [221/458] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/3dmol && 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-isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/ThreeDMol_autoge n/mocs_compilation.cpp.o -MF avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/ThreeDMol_autogen/mocs_compilation.cpp.o.d -o avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/ThreeDMol_autogen/mocs_compilation.cpp.o -c avogadro/qtplugins/3dmol/ThreeDMol_autogen/mocs_compilation.cpp [224/458] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/3dmol/ThreeDMol_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/3dmol -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/3dmol.cpp.o -MF avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/3dmol.cpp.o.d -o avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/3dmol.cpp.o -c 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avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/bonding.cpp.o -MF avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/bonding.cpp.o.d -o avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/bonding.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1/avogadro/qtplugins/bonding/bonding.cpp [232/458] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/bonding/Bonding_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/bonding -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include 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-isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/commandscripts/CMakeFiles/comm ands.dir/commands_autogen/mocs_compilation.cpp.o -MF avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/commands_autogen/mocs_compilation.cpp.o.d -o avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/commands_autogen/mocs_compilation.cpp.o -c avogadro/qtplugins/commandscripts/commands_autogen/mocs_compilation.cpp [236/458] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/commandscripts/commands_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue 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avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/commandsPlugin.cpp.o.d -o avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/commandsPlugin.cpp.o -c avogadro/qtplugins/commandscripts/commandsPlugin.cpp [238/458] : && /usr/local/bin/cmake -E remove lib/avogadro2/staticplugins/commands.a && /nxb-bin/usr/bin/ar qc lib/avogadro2/staticplugins/commands.a avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/commands_autogen/mocs_compilation.cpp.o avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/command.cpp.o avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/commandsPlugin.cpp.o && /nxb-bin/usr/bin/ranlib lib/avogadro2/staticplugins/commands.a && : [239/458] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/coordinateeditor && /usr/local/bin/cmake -E cmake_autogen /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen.dir/AutogenInfo.cmake Release [240/458] cd 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-isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hi dden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/CoordinateEditor_autogen/mocs_compilation.cpp.o -MF avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/CoordinateEditor_autogen/mocs_compilation.cpp.o.d -o avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/CoordinateEditor_autogen/mocs_compilation.cpp.o -c avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/mocs_compilation.cpp [242/458] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB 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avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/coordinateeditor.cpp.o -MF avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/coordinateeditor.cpp.o.d -o avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/coordinateeditor.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1/avogadro/qtplugins/coordinateeditor/coordinateeditor.cpp [243/458] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1/avogadro/qtplugins/coordinateeditor -Iavogadro/qtplugins/coordinateeditor -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hi dden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/coordinateeditordialog.cpp.o -MF avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/coordinateeditordialog.cpp.o.d -o avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/coordinateeditordialog.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1/avogadro/qtplugins/coordinateeditor/coordinateeditordialog.cpp [244/458] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN 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avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/coordinatetextedit.cpp.o -MF avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/coordinatetextedit.cpp.o.d -o avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/coordinatetextedit.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1/avogadro/qtplugins/coordinateeditor/coordinatetextedit.cpp /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1/avogadro/qtplugins/coordinateeditor/coordinatetextedit.cpp:35:50: warning: 'foreground' is deprecated: Use QPalette::windowText() instead [-Wdeprecated-declarations] m_unmarkedFormat.setForeground(qApp->palette().foreground().color()); ^ /usr/local/include/qt5/QtGui/qpalette.h:148:5: note: 'foreground' has been explicitly marked deprecated here QT_DEPRECATED_X("Use QPalette::windowText() instead") ^ /usr/local/include/qt5/QtCore/qglobal.h:294:33: note: expanded from macro 'QT_DEPRECATED_X' # define QT_DEPRECATED_X(text) Q_DECL_DEPRECATED_X(text) ^ /usr/local/include/qt5/QtCore/qcompilerdetection.h:649:55: note: expanded from macro 'Q_DECL_DEPRECATED_X' # define Q_DECL_DEPRECATED_X(text) __attribute__ ((__deprecated__(text))) ^ 1 warning generated. 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-isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/Copy Paste_autogen/mocs_compilation.cpp.o -MF avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/CopyPaste_autogen/mocs_compilation.cpp.o.d -o avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/CopyPaste_autogen/mocs_compilation.cpp.o -c avogadro/qtplugins/copypaste/CopyPaste_autogen/mocs_compilation.cpp [249/458] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/copypaste/CopyPaste_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1 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-fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/Copy PastePlugin.cpp.o -MF avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/CopyPastePlugin.cpp.o.d -o avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/CopyPastePlugin.cpp.o -c avogadro/qtplugins/copypaste/CopyPastePlugin.cpp [251/458] : && /usr/local/bin/cmake -E remove lib/avogadro2/staticplugins/CopyPaste.a && /nxb-bin/usr/bin/ar qc lib/avogadro2/staticplugins/CopyPaste.a avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/CopyPaste_autogen/mocs_compilation.cpp.o avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/copypaste.cpp.o avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/CopyPastePlugin.cpp.o && /nxb-bin/usr/bin/ranlib lib/avogadro2/staticplugins/CopyPaste.a && : [252/458] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/crystal && /usr/local/bin/cmake -E cmake_autogen /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen.dir/AutogenInfo.cmake Release [253/458] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/crystal && /usr/local/lib/qt5/bin/uic -o /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/crystal/ui_importcrystaldialog.h /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1/avogadro/qtplugins/crystal/importcrystaldialog.ui [254/458] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/crystal && /usr/local/lib/qt5/bin/uic -o /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/crystal/ui_supercelldialog.h /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1/avogadro/qtplugins/crystal/supercelldialog.ui [255/458] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/crystal && /usr/local/lib/qt5/bin/uic -o /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/crystal/ui_unitcelldialog.h /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1/avogadro/qtplugins/crystal/unitcelldialog.ui [256/458] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/crystal && /usr/local/lib/qt5/bin/uic -o /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/crystal/ui_volumescalingdialog.h /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1/avogadro/qtplugins/crystal/volumescalingdialog.ui [257/458] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/crystal/Crystal_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/crystal -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/Crystal_autoge n/mocs_compilation.cpp.o -MF avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/Crystal_autogen/mocs_compilation.cpp.o.d -o avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/Crystal_autogen/mocs_compilation.cpp.o -c avogadro/qtplugins/crystal/Crystal_autogen/mocs_compilation.cpp [258/458] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/crystal/Crystal_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/crystal -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/crystal.cpp.o -MF avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/crystal.cpp.o.d -o avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/crystal.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1/avogadro/qtplugins/crystal/crystal.cpp [259/458] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/crystal/Crystal_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/crystal -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/importcrystald ialog.cpp.o -MF avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/importcrystaldialog.cpp.o.d -o avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/importcrystaldialog.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1/avogadro/qtplugins/crystal/importcrystaldialog.cpp [260/458] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/crystal/Crystal_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/crystal -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/supercelldialo g.cpp.o -MF avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/supercelldialog.cpp.o.d -o avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/supercelldialog.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1/avogadro/qtplugins/crystal/supercelldialog.cpp [261/458] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/crystal/Crystal_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/crystal -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/unitcelldialog .cpp.o -MF avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/unitcelldialog.cpp.o.d -o avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/unitcelldialog.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1/avogadro/qtplugins/crystal/unitcelldialog.cpp /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1/avogadro/qtplugins/crystal/unitcelldialog.cpp:321:30: warning: 'width' is deprecated: Use QFontMetrics::horizontalAdvance [-Wdeprecated-declarations] int minWidth = 3 * metrics.width('0') * (MATRIX_WIDTH + 1); ^ /usr/local/include/qt5/QtGui/qfontmetrics.h:111:5: note: 'width' has been explicitly marked deprecated here QT_DEPRECATED_X("Use QFontMetrics::horizontalAdvance") ^ /usr/local/include/qt5/QtCore/qglobal.h:294:33: note: expanded from macro 'QT_DEPRECATED_X' # define QT_DEPRECATED_X(text) Q_DECL_DEPRECATED_X(text) ^ /usr/local/include/qt5/QtCore/qcompilerdetection.h:649:55: note: expanded from macro 'Q_DECL_DEPRECATED_X' # define Q_DECL_DEPRECATED_X(text) __attribute__ ((__deprecated__(text))) ^ 1 warning generated. 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-fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/CrystalPlugin. cpp.o -MF avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/CrystalPlugin.cpp.o.d -o avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/CrystalPlugin.cpp.o -c avogadro/qtplugins/crystal/CrystalPlugin.cpp [264/458] : && /usr/local/bin/cmake -E remove lib/avogadro2/staticplugins/Crystal.a && /nxb-bin/usr/bin/ar qc lib/avogadro2/staticplugins/Crystal.a avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/Crystal_autogen/mocs_compilation.cpp.o avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/crystal.cpp.o avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/importcrystaldialog.cpp.o avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/supercelldialog.cpp.o 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/usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/Crys talScene_autogen/mocs_compilation.cpp.o -MF avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/CrystalScene_autogen/mocs_compilation.cpp.o.d -o avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/CrystalScene_autogen/mocs_compilation.cpp.o -c avogadro/qtplugins/crystal/CrystalScene_autogen/mocs_compilation.cpp [267/458] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB 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-fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/customelements/CMakeFile s/CustomElements.dir/CustomElements_autogen/mocs_compilation.cpp.o -MF avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/CustomElements_autogen/mocs_compilation.cpp.o.d -o avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/CustomElements_autogen/mocs_compilation.cpp.o -c avogadro/qtplugins/customelements/CustomElements_autogen/mocs_compilation.cpp [272/458] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/customelements/CustomElements_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/customelements -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/customelements/CMakeFile s/CustomElements.dir/customelements.cpp.o -MF avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/customelements.cpp.o.d -o avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/customelements.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1/avogadro/qtplugins/customelements/customelements.cpp [273/458] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/customelements/CustomElements_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/customelements -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/customelements/CMakeFile s/CustomElements.dir/CustomElementsPlugin.cpp.o -MF avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/CustomElementsPlugin.cpp.o.d -o avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/CustomElementsPlugin.cpp.o -c avogadro/qtplugins/customelements/CustomElementsPlugin.cpp [274/458] : && /usr/local/bin/cmake -E remove lib/avogadro2/staticplugins/CustomElements.a && /nxb-bin/usr/bin/ar qc lib/avogadro2/staticplugins/CustomElements.a avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/CustomElements_autogen/mocs_compilation.cpp.o avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/customelements.cpp.o avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/CustomElementsPlugin.cpp.o && /nxb-bin/usr/bin/ranlib lib/avogadro2/staticplugins/CustomElements.a && : [275/458] cd 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/usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -std=c++11 -MD -MT avogadro/qtopengl/CMakeFiles/AvogadroQtOpenGL.dir/AvogadroQtOpenGL_autogen/mocs_compilation.cpp.o -MF avo gadro/qtopengl/CMakeFiles/AvogadroQtOpenGL.dir/AvogadroQtOpenGL_autogen/mocs_compilation.cpp.o.d -o avogadro/qtopengl/CMakeFiles/AvogadroQtOpenGL.dir/AvogadroQtOpenGL_autogen/mocs_compilation.cpp.o -c avogadro/qtopengl/AvogadroQtOpenGL_autogen/mocs_compilation.cpp [277/458] /nxb-bin/usr/bin/c++ -DAvogadroQtOpenGL_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Iavogadro/qtopengl/AvogadroQtOpenGL_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -std=c++11 -MD -MT avogadro/qtopengl/CMakeFiles/AvogadroQtOpenGL.dir/activeobjects.cpp.o -MF avogadro/qtopengl/CMakeFiles/Av ogadroQtOpenGL.dir/activeobjects.cpp.o.d -o avogadro/qtopengl/CMakeFiles/AvogadroQtOpenGL.dir/activeobjects.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1/avogadro/qtopengl/activeobjects.cpp [278/458] /nxb-bin/usr/bin/c++ -DAvogadroQtOpenGL_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Iavogadro/qtopengl/AvogadroQtOpenGL_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -std=c++11 -MD -MT avogadro/qtopengl/CMakeFiles/AvogadroQtOpenGL.dir/glwidget.cpp.o -MF avogadro/qtopengl/CMakeFiles/Avogadr oQtOpenGL.dir/glwidget.cpp.o.d -o avogadro/qtopengl/CMakeFiles/AvogadroQtOpenGL.dir/glwidget.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1/avogadro/qtopengl/glwidget.cpp [279/458] /nxb-bin/usr/bin/c++ -DAvogadroQtOpenGL_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Iavogadro/qtopengl/AvogadroQtOpenGL_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -std=c++11 -MD -MT avogadro/qtopengl/CMakeFiles/AvogadroQtOpenGL.dir/qttextrenderstrategy.cpp.o -MF avogadro/qtopengl/CMakeF iles/AvogadroQtOpenGL.dir/qttextrenderstrategy.cpp.o.d -o avogadro/qtopengl/CMakeFiles/AvogadroQtOpenGL.dir/qttextrenderstrategy.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1/avogadro/qtopengl/qttextrenderstrategy.cpp [280/458] : && /nxb-bin/usr/bin/c++ -fPIC -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fstack-protector-strong -shared -Wl,-soname,libAvogadroQtOpenGL.so.1 -o lib/libAvogadroQtOpenGL.so.1.92.0 avogadro/qtopengl/CMakeFiles/AvogadroQtOpenGL.dir/AvogadroQtOpenGL_autogen/mocs_compilation.cpp.o avogadro/qtopengl/CMakeFiles/AvogadroQtOpenGL.dir/activeobjects.cpp.o avogadro/qtopengl/CMakeFiles/AvogadroQtOpenGL.dir/glwidget.cpp.o avogadro/qtopengl/CMakeFiles/AvogadroQtOpenGL.dir/qttextrenderstrategy.cpp.o -Wl,-rpath,/wrkdirs/usr/ports/science/avogadrolibs/work/.build/lib:/usr/local/lib/qt5:/usr/local/lib: lib/libAvogadroRendering.so.1.92.0 lib/libAvogadroQtGui.so.1.92.0 /usr/local/lib/qt5/libQt5Widgets.so.5.13.2 /usr/local/lib/libGLEW.so /usr/local/lib/libGL.so /usr/local/lib/libGLU.so lib/libAvogadroIO.so.1.92 .0 lib/libAvogadroCore.so.1.92.0 /usr/local/lib/qt5/libQt5Widgets.so.5.13.2 /usr/local/lib/qt5/libQt5Gui.so.5.13.2 /usr/local/lib/qt5/libQt5Core.so.5.13.2 /usr/local/lib/qt5/libQt5Gui.so.5.13.2 /usr/local/lib/qt5/libQt5Core.so.5.13.2 -Wl,-rpath-link,/usr/local/lib && : [281/458] /usr/local/bin/cmake -E cmake_symlink_library lib/libAvogadroQtOpenGL.so.1.92.0 lib/libAvogadroQtOpenGL.so.1 lib/libAvogadroQtOpenGL.so && : [282/458] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/selectiontool && /usr/local/bin/cmake -E cmake_autogen /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen.dir/AutogenInfo.cmake Release [283/458] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/selectiontool && /usr/local/lib/qt5/bin/rcc --name selectiontool --output /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/selectiontool/qrc_selectiontool.cpp /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1/avogadro/qtplugins/selectiontool/selectiontool.qrc [284/458] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/selectiontool/Selection_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/selectiontool -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/selectiontool/CMakeFiles/Select ion.dir/Selection_autogen/mocs_compilation.cpp.o -MF avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/Selection_autogen/mocs_compilation.cpp.o.d -o avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/Selection_autogen/mocs_compilation.cpp.o -c avogadro/qtplugins/selectiontool/Selection_autogen/mocs_compilation.cpp [285/458] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/selectiontool/Selection_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1 -Iavogadro/core -Iavogadro/io 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/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1/avogadro/qtplugins/selectiontool/selectiontool.cpp [286/458] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/selectiontool/Selection_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/selectiontool -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/selectiontool/CMakeFiles/Select ion.dir/qrc_selectiontool.cpp.o -MF avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/qrc_selectiontool.cpp.o.d -o avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/qrc_selectiontool.cpp.o -c avogadro/qtplugins/selectiontool/qrc_selectiontool.cpp [287/458] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/selectiontool/Selection_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/selectiontool -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/selectiontool/CMakeFiles/Select ion.dir/SelectionPlugin.cpp.o -MF avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/SelectionPlugin.cpp.o.d -o avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/SelectionPlugin.cpp.o -c avogadro/qtplugins/selectiontool/SelectionPlugin.cpp [288/458] : && /usr/local/bin/cmake -E remove lib/avogadro2/staticplugins/Selection.a && /nxb-bin/usr/bin/ar qc lib/avogadro2/staticplugins/Selection.a avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/Selection_autogen/mocs_compilation.cpp.o avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/selectiontool.cpp.o avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/qrc_selectiontool.cpp.o avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/SelectionPlugin.cpp.o && /nxb-bin/usr/bin/ranlib lib/avogadro2/staticplugins/Selection.a && : [289/458] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/bondcentrictool && /usr/local/bin/cmake -E cmake_autogen /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen.dir/AutogenInfo.cmake Release [290/458] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/bondcentrictool && /usr/local/lib/qt5/bin/rcc --name bondcentrictool --output /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/bondcentrictool/qrc_bondcentrictool.cpp /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1/avogadro/qtplugins/bondcentrictool/bondcentrictool.qrc [291/458] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/bondcentrictool/BondCentric_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/bondcentrictool -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/bondcentrictool/CMakeFile s/BondCentric.dir/BondCentric_autogen/mocs_compilation.cpp.o -MF 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/usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/bondcentrictool/CMakeFile s/BondCentric.dir/bondcentrictool.cpp.o -MF avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/bondcentrictool.cpp.o.d -o avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/bondcentrictool.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1/avogadro/qtplugins/bondcentrictool/bondcentrictool.cpp [293/458] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/bondcentrictool/BondCentric_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/bondcentrictool -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/bondcentrictool/CMakeFile s/BondCentric.dir/qrc_bondcentrictool.cpp.o -MF avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/qrc_bondcentrictool.cpp.o.d -o avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/qrc_bondcentrictool.cpp.o -c avogadro/qtplugins/bondcentrictool/qrc_bondcentrictool.cpp [294/458] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/bondcentrictool/BondCentric_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/bondcentrictool -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/bondcentrictool/CMakeFile s/BondCentric.dir/BondCentricPlugin.cpp.o -MF avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/BondCentricPlugin.cpp.o.d -o avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/BondCentricPlugin.cpp.o -c avogadro/qtplugins/bondcentrictool/BondCentricPlugin.cpp [295/458] : && /usr/local/bin/cmake -E remove lib/avogadro2/staticplugins/BondCentric.a && /nxb-bin/usr/bin/ar qc lib/avogadro2/staticplugins/BondCentric.a avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/BondCentric_autogen/mocs_compilation.cpp.o avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/bondcentrictool.cpp.o avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/qrc_bondcentrictool.cpp.o avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/BondCentricPlugin.cpp.o && /nxb-bin/usr/bin/ranlib lib/avogadro2/staticplugins/BondCentric.a && : [296/458] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/molequeue && /usr/local/bin/cmake -E cmake_autogen /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/molequeue/CMakeFiles/AvogadroMoleQueue_autogen.dir/AutogenInfo.cmake Release [297/458] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/molequeue && /usr/local/lib/qt5/bin/uic -o /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/molequeue/ui_inputgeneratordialog.h /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1/avogadro/molequeue/inputgeneratordialog.ui [298/458] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/molequeue && /usr/local/lib/qt5/bin/uic -o /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/molequeue/ui_inputgeneratorwidget.h /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1/avogadro/molequeue/inputgeneratorwidget.ui [299/458] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/molequeue && /usr/local/lib/qt5/bin/uic -o /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/molequeue/ui_molequeuedialog.h /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1/avogadro/molequeue/molequeuedialog.ui [300/458] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/molequeue && /usr/local/lib/qt5/bin/uic -o /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/molequeue/ui_molequeuewidget.h /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1/avogadro/molequeue/molequeuewidget.ui [301/458] /nxb-bin/usr/bin/c++ -DAvogadroMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Iavogadro/molequeue/AvogadroMoleQueue_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -isystem /usr/local/include/qt5/QtNetwork -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -std=c++11 -MD -MT avogadro/molequeue/CMa keFiles/AvogadroMoleQueue.dir/AvogadroMoleQueue_autogen/mocs_compilation.cpp.o -MF avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/AvogadroMoleQueue_autogen/mocs_compilation.cpp.o.d -o avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/AvogadroMoleQueue_autogen/mocs_compilation.cpp.o -c avogadro/molequeue/AvogadroMoleQueue_autogen/mocs_compilation.cpp [302/458] /nxb-bin/usr/bin/c++ -DAvogadroMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Iavogadro/molequeue/AvogadroMoleQueue_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -isystem /usr/local/include/qt5/QtNetwork -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -std=c++11 -MD -MT avogadro/molequeue/CMa keFiles/AvogadroMoleQueue.dir/batchjob.cpp.o -MF avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/batchjob.cpp.o.d -o avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/batchjob.cpp.o -c 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-I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -isystem /usr/local/include/qt5/QtNetwork -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -std=c++11 -MD -MT avogadro/molequeue/CMa keFiles/AvogadroMoleQueue.dir/inputgeneratorwidget.cpp.o -MF avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/inputgeneratorwidget.cpp.o.d -o avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/inputgeneratorwidget.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1/avogadro/molequeue/inputgeneratorwidget.cpp /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1/avogadro/molequeue/inputgeneratorwidget.cpp:414:27: warning: 'width' is deprecated: Use QFontMetrics::horizontalAdvance [-Wdeprecated-declarations] int charWidth = metrics.width("i7OPlmWn9/") / 10; ^ /usr/local/include/qt5/QtGui/qfontmetrics.h:107:5: note: 'width' has been explicitly marked deprecated here QT_DEPRECATED_X("Use QFontMetrics::horizontalAdvance") ^ /usr/local/include/qt5/QtCore/qglobal.h:294:33: note: expanded from macro 'QT_DEPRECATED_X' # define QT_DEPRECATED_X(text) Q_DECL_DEPRECATED_X(text) ^ /usr/local/include/qt5/QtCore/qcompilerdetection.h:649:55: note: expanded from macro 'Q_DECL_DEPRECATED_X' # define Q_DECL_DEPRECATED_X(text) __attribute__ ((__deprecated__(text))) ^ 1 warning generated. 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-fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -std=c++11 -MD -MT avogadro/molequeue/CMa keFiles/AvogadroMoleQueue.dir/molequeuemanager.cpp.o -MF avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/molequeuemanager.cpp.o.d -o avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/molequeuemanager.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1/avogadro/molequeue/molequeuemanager.cpp [308/458] /nxb-bin/usr/bin/c++ -DAvogadroMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Iavogadro/molequeue/AvogadroMoleQueue_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -isystem /usr/local/include/qt5/QtNetwork -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -std=c++11 -MD -MT avogadro/molequeue/CMa keFiles/AvogadroMoleQueue.dir/molequeuequeuelistmodel.cpp.o -MF avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/molequeuequeuelistmodel.cpp.o.d -o avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/molequeuequeuelistmodel.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1/avogadro/molequeue/molequeuequeuelistmodel.cpp [309/458] /nxb-bin/usr/bin/c++ -DAvogadroMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Iavogadro/molequeue/AvogadroMoleQueue_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -isystem /usr/local/include/qt5/QtNetwork -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -std=c++11 -MD -MT avogadro/molequeue/CMa keFiles/AvogadroMoleQueue.dir/molequeuewidget.cpp.o -MF avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/molequeuewidget.cpp.o.d -o avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/molequeuewidget.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.92.1/avogadro/molequeue/molequeuewidget.cpp [310/458] : && /nxb-bin/usr/bin/c++ -fPIC -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fstack-protector-strong -shared -Wl,-soname,libAvogadroMoleQueue.so.1 -o lib/libAvogadroMoleQueue.so.1.92.0 avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/AvogadroMoleQueue_autogen/mocs_compilation.cpp.o avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/batchjob.cpp.o avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/inputgenerator.cpp.o avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/inputgeneratordialog.cpp.o avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/inputgeneratorwidget.cpp.o avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/molequeuedialog.cpp.o avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/molequeuemanager.cpp.o avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/molequeuequeuelistmo del.cpp.o avogadro/molequeue/CMakeFiles/AvogadroMoleQueue.dir/molequeuewidget.cpp.o -Wl,-rpath,/wrkdirs/usr/ports/science/avogadrolibs/work/.build/lib:/usr/local/lib:/usr/local/lib/qt5: lib/libAvogadroQtGui.so.1.92.0 /usr/local/lib/libMoleQueueClient.so /usr/local/lib/qt5/libQt5Widgets.so.5.13.2 /usr/local/lib/qt5/libQt5Network.so.5.13.2 lib/libAvogadroIO.so.1.92.0 lib/libAvogadroCore.so.1.92.0 /usr/local/lib/qt5/libQt5Widgets.so.5.13.2 /usr/local/lib/qt5/libQt5Gui.so.5.13.2 /usr/local/lib/qt5/libQt5Core.so.5.13.2 /usr/local/lib/qt5/libQt5Gui.so.5.13.2 /usr/local/lib/qt5/libQt5Core.so.5.13.2 -Wl,-rpath-link,/usr/local/lib && : [311/458] /usr/local/bin/cmake -E cmake_symlink_library lib/libAvogadroMoleQueue.so.1.92.0 lib/libAvogadroMoleQueue.so.1 lib/libAvogadroMoleQueue.so && : [312/458] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/apbs && /usr/local/bin/cmake -E cmake_autogen /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen.dir/AutogenInfo.cmake Release FAILED: avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen avogadro/qtplugins/apbs/apbs_autogen/mocs_compilation.cpp cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/apbs && /usr/local/bin/cmake -E cmake_autogen /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen.dir/AutogenInfo.cmake Release Fatal error 'thread 0xf3d12800 exits with resources held!' at line 320 in file /usr/local/poudriere/jails/120armv7/usr/src/lib/libthr/thread/thr_exit.c (errno = 0) qemu: uncaught target signal 6 (Abort trap) - core dumped ninja: build stopped: subcommand failed. *** Error code 1 Stop. make: stopped in /usr/ports/science/avogadrolibs
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