Date: Sat, 17 Aug 2019 16:35:25 GMT From: pkg-fallout@FreeBSD.org To: pkg-fallout@FreeBSD.org Subject: [package - 120powerpc64-quarterly][science/afni] Failed for afni-19.1.20 in package Message-ID: <201908171635.x7HGZPi5022860@pylon.nyi.freebsd.org>
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You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: jwb@FreeBSD.org Last committer: jwb@FreeBSD.org Ident: $FreeBSD: branches/2019Q3/science/afni/Makefile 504496 2019-06-18 19:00:55Z jwb $ Log URL: http://pylon.nyi.freebsd.org/data/120powerpc64-quarterly/509003/logs/afni-19.1.20.log Build URL: http://pylon.nyi.freebsd.org/build.html?mastername=120powerpc64-quarterly&build=509003 Log: =>> Building science/afni build started at Sat Aug 17 15:39:04 UTC 2019 port directory: /usr/ports/science/afni package name: afni-19.1.20 building for: FreeBSD 120powerpc64-quarterly-job-04 12.0-RELEASE-p9 FreeBSD 12.0-RELEASE-p9 1200086 powerpc maintained by: jwb@FreeBSD.org Makefile ident: $FreeBSD: branches/2019Q3/science/afni/Makefile 504496 2019-06-18 19:00:55Z jwb $ Poudriere version: 3.2.8-5-gc81843e5 Host OSVERSION: 1300039 Jail OSVERSION: 1200086 Job Id: 04 ---Begin Environment--- SHELL=/bin/csh OSVERSION=1200086 UNAME_v=FreeBSD 12.0-RELEASE-p9 1200086 UNAME_r=12.0-RELEASE-p9 BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-5-gc81843e5 MASTERMNT=/usr/local/poudriere/data/.m/120powerpc64-quarterly/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM=screen PWD=/usr/local/poudriere/data/.m/120powerpc64-quarterly/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=120powerpc64-quarterly SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/120powerpc64-quarterly/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ===> The following configuration options are available for afni-19.1.20: DOCS=on: Build and/or install documentation ===> Use 'make config' to modify these settings ---End OPTIONS List--- --MAINTAINER-- jwb@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl ac_cv_path_PERL_PATH=/usr/local/bin/perl PERL_USE_UNSAFE_INC=1 PYTHON="/usr/local/bin/python3.6" XDG_DATA_HOME=/wrkdirs/usr/ports/science/afni/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/afni/work HOME=/wrkdirs/usr/ports/science/afni/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/afni/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh LANG=en_US.UTF-8 LC_ALL=en_US.UTF-8 --End CONFIGURE_ENV-- --MAKE_ENV-- CC="cc" R_SHARE_DIR=/usr/local/lib/R/share MOTIFLIB="-L/usr/local/lib -lXm -lXp" PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/science/afni/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/afni/work HOME=/wrkdirs/usr/ports/science/afni/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/afni/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES LANG=en_US.UTF-8 LC_ALL=en_US.UTF-8 PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="-DLIBICONV_PLUG" LDFLAGS=" -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong -fno-strict-aliasing -DLIBICONV_PLUG " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 06 44" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- PORTDOCS="" GTK2_VERSION="2.10.0" GTK3_VERSION="3.0.0" PYTHON_INCLUDEDIR=include/python3.6m PYTHON_LIBDIR=lib/python3.6 PYTHON_PLATFORM=freebsd12 PYTHON_SITELIBDIR=lib/python3.6/site-packages PYTHON_SUFFIX=36 PYTHON_VER=3.6 PYTHON_VERSION=python3.6 PYTHON2="@comment " PYTHON3="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib PERL_VERSION=5.28.2 PERL_VER=5.28 PERL5_MAN1=lib/perl5/site_perl/man/man1 PERL5_MAN3=lib/perl5/site_perl/man/man3 SITE_PERL=lib/perl5/site_perl SITE_ARCH=lib/perl5/site_perl/mach/5.28 DOCSDIR="share/doc/afni" EXAMPLESDIR="share/examples/afni" DATADIR="share/afni" WWWDIR="www/afni" ETCDIR="etc/afni" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/afni DOCSDIR=/usr/local/share/doc/afni EXAMPLESDIR=/usr/local/share/examples/afni WWWDIR=/usr/local/www/afni ETCDIR=/usr/local/etc/afni --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 # stable/10 includes src.conf too late but make.conf is in sys.mk .if ${.CURDIR:M/poudriere/jails/10*/usr/src/usr.bin/xlint*} # Disable build of llib now that head no longer has lint(1) LINT= true .endif #### /usr/ports/Mk/Scripts/ports_env.sh #### _CCVERSION_921dbbb2=cc (GCC) 4.2.1 20070831 patched [FreeBSD] Copyright (C) 2007 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. _ALTCCVERSION_921dbbb2=none _CXXINTERNAL_acaad9ca=Using built-in specs. Target: powerpc64-undermydesk-freebsd Configured with: FreeBSD/powerpc64 system compiler Thread model: posix gcc version 4.2.1 20070831 patched [FreeBSD] "/usr/bin/ld" "--eh-frame-hdr" "-Qy" "-melf64ppc_fbsd" "--enable-new-dtags" "-dynamic-linker" "/libexec/ld-elf.so.1" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "-L/usr/lib" "/dev/null" "-lstdc++" "-lm" "-lgcc_s" "-lgcc" "-lc" "-lgcc_s" "-lgcc" "/usr/lib/crtsavres.o" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_921dbbb2_58173849=yes CC_OUTPUT_921dbbb2_9bdba57c=yes CC_OUTPUT_921dbbb2_6a4fe7f5=cc1: error: unrecognized command line option "-std=c11" CC_OUTPUT_921dbbb2_6bcac02b=yes CC_OUTPUT_921dbbb2_67d20829=yes CC_OUTPUT_921dbbb2_bfa62e83=cc1: error: unrecognized command line option "-std=gnu11" CC_OUTPUT_921dbbb2_f0b4d593=yes CC_OUTPUT_921dbbb2_308abb44=cc1plus: error: unrecognized command line option "-std=c++0x" CC_OUTPUT_921dbbb2_f00456e5=cc1plus: error: unrecognized command line option "-std=c++11" CC_OUTPUT_921dbbb2_65ad290d=cc1plus: error: unrecognized command line option "-std=c++14" CC_OUTPUT_921dbbb2_f2776b26=cc1plus: error: unrecognized command line option "-std=c++17" CC_OUTPUT_921dbbb2_b2657cc3=yes CC_OUTPUT_921dbbb2_380987f7=cc1plus: error: unrecognized command line option "-std=gnu++11" CC_OUTPUT_921dbbb2_160933ec=cc1plus: error: unrecognized command line option "-std=gnu++14" CC_OUTPUT_921dbbb2_fb62803b=cc1plus: error: unrecognized command line option "-std=gnu++17" _OBJC_CCVERSION_921dbbb2=cc (GCC) 4.2.1 20070831 patched [FreeBSD] Copyright (C) 2007 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. _OBJC_ALTCCVERSION_921dbbb2=none ARCH=powerpc64 OPSYS=FreeBSD _OSRELEASE=12.0-RELEASE-p9 OSREL=12.0 OSVERSION=1200086 PYTHONBASE=/usr/local CONFIGURE_MAX_CMD_LEN=262144 HAVE_PORTS_ENV=1 #### Misc Poudriere #### GID=0 UID=0 DISABLE_MAKE_JOBS=poudriere ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===> License GPLv2 accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===> afni-19.1.20 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.11.1.txz [120powerpc64-quarterly-job-04] Installing pkg-1.11.1... [120powerpc64-quarterly-job-04] Extracting pkg-1.11.1: .......... done ===> afni-19.1.20 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of afni-19.1.20 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by afni-19.1.20 for building =========================================================================== =======================<phase: checksum >============================ ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by afni-19.1.20 for building => SHA256 Checksum OK for afni-afni-AFNI_19.1.20_GH0.tar.gz. =========================================================================== =======================<phase: extract-depends>============================ =========================================================================== =======================<phase: extract >============================ ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by afni-19.1.20 for building ===> Extracting for afni-19.1.20 => SHA256 Checksum OK for afni-afni-AFNI_19.1.20_GH0.tar.gz. =========================================================================== =======================<phase: patch-depends >============================ =========================================================================== =======================<phase: patch >============================ ===> Patching for afni-19.1.20 ===> Applying FreeBSD patches for afni-19.1.20 =========================================================================== =======================<phase: build-depends >============================ ===> afni-19.1.20 depends on executable: gm4 - not found ===> Installing existing package /packages/All/m4-1.4.18_1,1.txz [120powerpc64-quarterly-job-04] Installing m4-1.4.18_1,1... [120powerpc64-quarterly-job-04] `-- Installing indexinfo-0.3.1... [120powerpc64-quarterly-job-04] `-- Extracting indexinfo-0.3.1: .... done [120powerpc64-quarterly-job-04] Extracting m4-1.4.18_1,1: .......... done ===> afni-19.1.20 depends on executable: gm4 - found ===> Returning to build of afni-19.1.20 ===> afni-19.1.20 depends on executable: R - not found ===> Installing existing package /packages/All/R-3.6.0_1.txz [120powerpc64-quarterly-job-04] Installing R-3.6.0_1... <snip> rm -f gts2oogl gts2oogl rm -f gtscompare gtscompare rm -f gtscheck gtscheck rm -f stl2gts stl2gts rm -f gts2dxf gts2dxf rm -f gts2stl gts2stl rm -rf .libs _libs rm -f *.o rm -f *.lo gmake[4]: Leaving directory '/wrkdirs/usr/ports/science/afni/work/afni-AFNI_19.1.20/src/SUMA/gts/tools' Making clean in src gmake[4]: Entering directory '/wrkdirs/usr/ports/science/afni/work/afni-AFNI_19.1.20/src/SUMA/gts/src' test -z "gts-config predicates_init.h" || rm -f gts-config predicates_init.h test -z "libgts.la" || rm -f libgts.la rm -f "./so_locations" rm -rf .libs _libs rm -f *.o rm -f *.lo gmake[4]: Leaving directory '/wrkdirs/usr/ports/science/afni/work/afni-AFNI_19.1.20/src/SUMA/gts/src' Making clean in . gmake[4]: Entering directory '/wrkdirs/usr/ports/science/afni/work/afni-AFNI_19.1.20/src/SUMA/gts' rm -rf .libs _libs rm -f *.lo gmake[4]: Leaving directory '/wrkdirs/usr/ports/science/afni/work/afni-AFNI_19.1.20/src/SUMA/gts' gmake[3]: Leaving directory '/wrkdirs/usr/ports/science/afni/work/afni-AFNI_19.1.20/src/SUMA/gts' gmake[3]: Entering directory '/wrkdirs/usr/ports/science/afni/work/afni-AFNI_19.1.20/src/SUMA/gts' gmake all-recursive gmake[4]: Entering directory '/wrkdirs/usr/ports/science/afni/work/afni-AFNI_19.1.20/src/SUMA/gts' Making all in src gmake[5]: Entering directory '/wrkdirs/usr/ports/science/afni/work/afni-AFNI_19.1.20/src/SUMA/gts/src' cd .. && /bin/sh ./config.status src/gts-config config.status: creating src/gts-config cc -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong -fno-strict-aliasing -Wno-return-type -Wno-switch -DFreeBSD -DNO_GAMMA -DUSE_TRACING -DHAVE_XDBE -DSUMA_MOTIF_GLXAREA -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I/usr/include/netpbm -DG_LOG_DOMAIN=\"Gts\" -DLIBICONV_PLUG -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong -fno-strict-aliasing -Wno-return-type -Wno-switch -DFreeBSD -DNO_GAMMA -DUSE_TRACING -DHAVE_XDBE -DSUMA_MOTIF_GLXAREA -Wall -Werror-implicit-function-declaration -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -I/usr/local/include/glib-2.0 -I/usr/local/lib/glib-2.0/include -I/usr/local/include ./predicates_init.c -o ./predicates_init ./predicates_init.c: In function 'main': ./predicates_init.c:46: error: implicit declaration of function 'fpsetprec' ./predicates_init.c:46: error: 'FP_PD' undeclared (first use in this function) ./predicates_init.c:46: error: (Each undeclared identifier is reported only once ./predicates_init.c:46: error: for each function it appears in.) ./predicates_init.c:105: error: 'FP_PE' undeclared (first use in this function) gmake[5]: *** [Makefile:666: predicates_init] Error 1 gmake[5]: Leaving directory '/wrkdirs/usr/ports/science/afni/work/afni-AFNI_19.1.20/src/SUMA/gts/src' gmake[4]: *** [Makefile:306: all-recursive] Error 1 gmake[4]: Leaving directory '/wrkdirs/usr/ports/science/afni/work/afni-AFNI_19.1.20/src/SUMA/gts' gmake[3]: *** [Makefile:214: all] Error 2 gmake[3]: Leaving directory '/wrkdirs/usr/ports/science/afni/work/afni-AFNI_19.1.20/src/SUMA/gts' ranlib: warning: src/.libs/libgts.a: no such file cp: src/.libs/libgts.a: No such file or directory gmake[2]: *** [SUMA_Makefile_NoDev:695: libgts.a] Error 1 gmake[2]: Leaving directory '/wrkdirs/usr/ports/science/afni/work/afni-AFNI_19.1.20/src/SUMA' ( if [ ! -d ./BSD ]; then /bin/mkdir -p ./BSD; echo WARNING: directory ./BSD has been created. ; fi ; \ /bin/cp -f SUMA/suma SUMA/MakeColorMap SUMA/ROI2dataset SUMA/3dVol2Surf \ SUMA/3dSurf2Vol SUMA/SurfMeasures SUMA/SurfFWHM \ SUMA/ScaleToMap SUMA/MapIcosahedron SUMA/CreateIcosahedron \ SUMA/CompareSurfaces SUMA/ConvertSurface SUMA/ConvertDset \ SUMA/SurfClust SUMA/IsoSurface SUMA/ConvexHull SUMA/SUMA_glxdino \ SUMA/SUMA_pixmap2eps SUMA/SurfaceMetrics SUMA/inspec \ SUMA/quickspec SUMA/FSread_annot SUMA/SurfPatch SUMA/SurfQual \ SUMA/SurfSmooth SUMA/SUMA_paperplane SUMA/SampBias \ SUMA/3dSkullStrip SUMA/3dCRUISEtoAFNI \ SUMA/3dBRAIN_VOYAGERtoAFNI SUMA/3dSurfMask \ SUMA/SurfToSurf SUMA/Surf2VolCoord SUMA/ROIgrow SUMA/SurfDsetInfo \ SUMA/SurfInfo SUMA/AnalyzeTrace SUMA/DriveSuma SUMA/SurfDist \ SUMA/SpharmReco SUMA/SpharmDeco SUMA/prompt_user SUMA/prompt_popup \ SUMA/SurfRetinoMap SUMA/ParseName SUMA/3dGenPriors \ SUMA/3dGenFeatureDist SUMA/3dSeg SUMA/SurfExtrema SUMA/3dinfill \ SUMA/3dHist SUMA/HalloSuma SUMA/InstaTract SUMA/niprobe SUMA/BrainSkin \ ./BSD ; \ if [ -f SUMA/SurfMesh ]; then /bin/cp -f SUMA/SurfMesh ./BSD ; fi; \ /bin/cp -f scripts_install/@SUMA_* ./BSD ;) cp: SUMA/MapIcosahedron: No such file or directory cp: SUMA/CreateIcosahedron: No such file or directory cp: SUMA/IsoSurface: No such file or directory cp: SUMA/ConvexHull: No such file or directory cp: SUMA/SurfaceMetrics: No such file or directory cp: SUMA/inspec: No such file or directory cp: SUMA/quickspec: No such file or directory cp: SUMA/FSread_annot: No such file or directory cp: SUMA/SurfPatch: No such file or directory cp: SUMA/SurfQual: No such file or directory cp: SUMA/SurfSmooth: No such file or directory cp: SUMA/SampBias: No such file or directory cp: SUMA/3dSkullStrip: No such file or directory cp: SUMA/3dCRUISEtoAFNI: No such file or directory cp: SUMA/3dBRAIN_VOYAGERtoAFNI: No such file or directory cp: SUMA/3dSurfMask: No such file or directory cp: SUMA/SurfToSurf: No such file or directory cp: SUMA/Surf2VolCoord: No such file or directory cp: SUMA/ROIgrow: No such file or directory cp: SUMA/SurfDsetInfo: No such file or directory cp: SUMA/SurfInfo: No such file or directory cp: SUMA/AnalyzeTrace: No such file or directory cp: SUMA/DriveSuma: No such file or directory cp: SUMA/SurfDist: No such file or directory cp: SUMA/SpharmReco: No such file or directory cp: SUMA/SpharmDeco: No such file or directory cp: SUMA/prompt_user: No such file or directory cp: SUMA/prompt_popup: No such file or directory cp: SUMA/SurfRetinoMap: No such file or directory cp: SUMA/ParseName: No such file or directory cp: SUMA/3dGenPriors: No such file or directory cp: SUMA/3dGenFeatureDist: No such file or directory cp: SUMA/3dSeg: No such file or directory cp: SUMA/SurfExtrema: No such file or directory cp: SUMA/3dinfill: No such file or directory cp: SUMA/3dHist: No such file or directory cp: SUMA/HalloSuma: No such file or directory cp: SUMA/InstaTract: No such file or directory cp: SUMA/niprobe: No such file or directory cp: SUMA/BrainSkin: No such file or directory gmake[1]: Leaving directory '/wrkdirs/usr/ports/science/afni/work/afni-AFNI_19.1.20/src' =========================================================================== =======================<phase: run-depends >============================ ===> afni-19.1.20 depends on executable: endian - not found ===> Installing existing package /packages/All/endian-1.1.txz [120powerpc64-quarterly-job-04] Installing endian-1.1... [120powerpc64-quarterly-job-04] Extracting endian-1.1: ..... done ===> afni-19.1.20 depends on executable: endian - found ===> Returning to build of afni-19.1.20 ===> afni-19.1.20 depends on executable: mpeg_encode - not found ===> Installing existing package /packages/All/mpeg_encode-1.5b.txz [120powerpc64-quarterly-job-04] Installing mpeg_encode-1.5b... [120powerpc64-quarterly-job-04] Extracting mpeg_encode-1.5b: .... done ===> afni-19.1.20 depends on executable: mpeg_encode - found ===> Returning to build of afni-19.1.20 ===> afni-19.1.20 depends on executable: qhull - not found ===> Installing existing package /packages/All/qhull5-1.0_3.txz [120powerpc64-quarterly-job-04] Installing qhull5-1.0_3... [120powerpc64-quarterly-job-04] Extracting qhull5-1.0_3: .......... done ===> afni-19.1.20 depends on executable: qhull - found ===> Returning to build of afni-19.1.20 ===> afni-19.1.20 depends on executable: R - found ===> afni-19.1.20 depends on executable: cjpeg - found ===> afni-19.1.20 depends on file: /usr/local/bin/python3.6 - found ===> afni-19.1.20 depends on file: /usr/local/libdata/pkgconfig/x11.pc - found ===> afni-19.1.20 depends on file: /usr/local/libdata/pkgconfig/xext.pc - found ===> afni-19.1.20 depends on file: /usr/local/libdata/pkgconfig/xi.pc - found ===> afni-19.1.20 depends on file: /usr/local/libdata/pkgconfig/xmu.pc - found ===> afni-19.1.20 depends on file: /usr/local/libdata/pkgconfig/xp.pc - found ===> afni-19.1.20 depends on file: /usr/local/libdata/pkgconfig/xt.pc - found ===> afni-19.1.20 depends on file: /usr/local/libdata/pkgconfig/xpm.pc - found ===> afni-19.1.20 depends on package: perl5>=5.28.r1<5.29 - found =========================================================================== =======================<phase: stage >============================ ===> Staging for afni-19.1.20 ===> Generating temporary packing list install -s -m 555 /wrkdirs/usr/ports/science/afni/work/afni-AFNI_19.1.20/src/prestage/bin/* /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin install -m 555 /wrkdirs/usr/ports/science/afni/work/afni-AFNI_19.1.20/src/prestage/scripts/* /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin install -m 0644 /wrkdirs/usr/ports/science/afni/work/afni-AFNI_19.1.20/src/prestage/lib/* /wrkdirs/usr/ports/science/afni/work/stage/usr/local/lib/afni install -m 0644 /wrkdirs/usr/ports/science/afni/work/afni-AFNI_19.1.20/src/prestage/include/* /wrkdirs/usr/ports/science/afni/work/stage/usr/local/include/afni (cd /wrkdirs/usr/ports/science/afni/work/afni-AFNI_19.1.20/src/prestage/share && /bin/sh -c '(/usr/bin/find -Ed $1 $3 | /usr/bin/cpio -dumpl $2 >/dev/null 2>&1) && /usr/bin/find -Ed $1 $3 \( -type d -exec /bin/sh -c '\''cd '\''$2'\'' && chmod 755 "$@"'\'' . {} + -o -type f -exec /bin/sh -c '\''cd '\''$2'\'' && chmod 0644 "$@"'\'' . {} + \)' COPYTREE_SHARE . /wrkdirs/usr/ports/science/afni/work/stage/usr/local/share/afni) install -m 555 /wrkdirs/usr/ports/science/afni/work/afni.cshrc /wrkdirs/usr/ports/science/afni/work/afni.profile /wrkdirs/usr/ports/science/afni/work/stage/usr/local/etc/mri install -m 0644 /wrkdirs/usr/ports/science/afni/work/afni-AFNI_19.1.20/src/prestage/doc/* /wrkdirs/usr/ports/science/afni/work/stage/usr/local/share/doc/afni ====> Compressing man pages (compress-man) =========================================================================== =======================<phase: package >============================ ===> Building package for afni-19.1.20 pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/3dBRAIN_VOYAGERtoAFNI:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/3dCRUISEtoAFNI:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/3dGenFeatureDist:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/3dGenPriors:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/3dHist:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/3dSeg:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/3dSkullStrip:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/3dSurfMask:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/3dinfill:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/AnalyzeTrace:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/BrainSkin:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/ConvexHull:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/CreateIcosahedron:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/DriveSuma:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/FSread_annot:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/HalloSuma:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/InstaTract:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/IsoSurface:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/MapIcosahedron:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/ParseName:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/ROIgrow:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/SampBias:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/SpharmDeco:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/SpharmReco:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/Surf2VolCoord:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/SurfDist:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/SurfDsetInfo:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/SurfExtrema:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/SurfInfo:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/SurfPatch:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/SurfQual:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/SurfRetinoMap:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/SurfSmooth:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/SurfToSurf:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/SurfaceMetrics:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/inspec:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/niprobe:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/prompt_popup:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/prompt_user:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/afni/work/stage/usr/local/bin/quickspec:No such file or directory *** Error code 1 Stop. make: stopped in /usr/ports/science/afni
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