Date: Fri, 2 Aug 2019 19:08:19 GMT From: pkg-fallout@FreeBSD.org To: pkg-fallout@FreeBSD.org Subject: [package - head-arm64-default][science/agrum] Failed for agrum-0.15.2 in lib-depends Message-ID: <201908021908.x72J8J2n046890@thunderx1.nyi.freebsd.org>
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You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: yuri@FreeBSD.org Last committer: yuri@FreeBSD.org Ident: $FreeBSD: head/science/agrum/Makefile 507022 2019-07-20 20:56:16Z yuri $ Log URL: http://thunderx1.nyi.freebsd.org/data/head-arm64-default/p507030_s350187/logs/agrum-0.15.2.log Build URL: http://thunderx1.nyi.freebsd.org/build.html?mastername=head-arm64-default&build=p507030_s350187 Log: =>> Building science/agrum build started at Fri Aug 2 19:06:57 UTC 2019 port directory: /usr/ports/science/agrum package name: agrum-0.15.2 building for: FreeBSD head-arm64-default-job-13 13.0-CURRENT FreeBSD 13.0-CURRENT 1300036 arm64 maintained by: yuri@FreeBSD.org Makefile ident: $FreeBSD: head/science/agrum/Makefile 507022 2019-07-20 20:56:16Z yuri $ Poudriere version: 3.2.8-5-gc81843e5 Host OSVERSION: 1300002 Jail OSVERSION: 1300036 Job Id: 13 !!! Jail is newer than host. (Jail: 1300036, Host: 1300002) !!! !!! This is not supported. !!! !!! Host kernel must be same or newer than jail. !!! !!! Expect build failures. !!! ---Begin Environment--- SHELL=/bin/csh OSVERSION=1300036 UNAME_v=FreeBSD 13.0-CURRENT 1300036 UNAME_r=13.0-CURRENT BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-5-gc81843e5 MASTERMNT=/usr/local/poudriere/data/.m/head-arm64-default/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= PWD=/usr/local/poudriere/data/.m/head-arm64-default/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=head-arm64-default SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/head-arm64-default/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ===> The following configuration options are available for agrum-0.15.2: ODBC=off: ODBC database backend OPENMP=on: Parallel processing support via OpenMP PYTHON=on: Python bindings or support ===> Use 'make config' to modify these settings ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- PYTHON="/usr/local/bin/python3.6" XDG_DATA_HOME=/wrkdirs/usr/ports/science/agrum/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/agrum/work HOME=/wrkdirs/usr/ports/science/agrum/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/agrum/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/science/agrum/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/agrum/work HOME=/wrkdirs/usr/ports/science/agrum/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/agrum/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES DESTDIR=/wrkdirs/usr/ports/science/agrum/work/stage PREFIX=/usr/local LOCALBASE=/usr/local CC="clang80" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="clang-cpp80" CPPFLAGS="" LDFLAGS=" /usr/local/llvm80/lib/libomp.so -fstack-protector-strong " LIBS="" CXX="clang++80" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- ODBC="@comment " NO_ODBC="" OPENMP="" NO_OPENMP="@comment " PYTHON="" NO_PYTHON="@comment " PYTHON_VER_MAJ=3 CMAKE_BUILD_TYPE="release" PYTHON_INCLUDEDIR=include/python3.6m PYTHON_LIBDIR=lib/python3.6 PYTHON_PLATFORM=freebsd13 PYTHON_SITELIBDIR=lib/python3.6/site-packages PYTHON_SUFFIX=36 PYTHON_VER=3.6 PYTHON_VERSION=python3.6 PYTHON2="@comment " PYTHON3="" OSREL=13.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/agrum" EXAMPLESDIR="share/examples/agrum" DATADIR="share/agrum" WWWDIR="www/agrum" ETCDIR="etc/agrum" --End PLIST_SUB-- --SUB_LIST-- ODBC="@comment " NO_ODBC="" OPENMP="" NO_OPENMP="@comment " PYTHON="" NO_PYTHON="@comment " PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/agrum DOCSDIR=/usr/local/share/doc/agrum EXAMPLESDIR=/usr/local/share/examples/agrum WWWDIR=/usr/local/www/agrum ETCDIR=/usr/local/etc/agrum --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 # stable/10 includes src.conf too late but make.conf is in sys.mk .if ${.CURDIR:M/poudriere/jails/10*/usr/src/usr.bin/xlint*} # Disable build of llib now that head no longer has lint(1) LINT= true .endif #### /usr/ports/Mk/Scripts/ports_env.sh #### _CCVERSION_921dbbb2=FreeBSD clang version 8.0.1 (tags/RELEASE_801/final 366581) (based on LLVM 8.0.1) Target: aarch64-unknown-freebsd13.0 Thread model: posix InstalledDir: /usr/bin _ALTCCVERSION_921dbbb2=none _CXXINTERNAL_acaad9ca=FreeBSD clang version 8.0.1 (tags/RELEASE_801/final 366581) (based on LLVM 8.0.1) Target: aarch64-unknown-freebsd13.0 Thread model: posix InstalledDir: /usr/bin "/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--enable-new-dtags" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_921dbbb2_58173849=yes CC_OUTPUT_921dbbb2_9bdba57c=yes CC_OUTPUT_921dbbb2_6a4fe7f5=yes CC_OUTPUT_921dbbb2_6bcac02b=yes CC_OUTPUT_921dbbb2_67d20829=yes CC_OUTPUT_921dbbb2_bfa62e83=yes CC_OUTPUT_921dbbb2_f0b4d593=yes CC_OUTPUT_921dbbb2_308abb44=yes CC_OUTPUT_921dbbb2_f00456e5=yes CC_OUTPUT_921dbbb2_65ad290d=yes CC_OUTPUT_921dbbb2_f2776b26=yes CC_OUTPUT_921dbbb2_b2657cc3=yes CC_OUTPUT_921dbbb2_380987f7=yes CC_OUTPUT_921dbbb2_160933ec=yes CC_OUTPUT_921dbbb2_fb62803b=yes _OBJC_CCVERSION_921dbbb2=FreeBSD clang version 8.0.1 (tags/RELEASE_801/final 366581) (based on LLVM 8.0.1) Target: aarch64-unknown-freebsd13.0 Thread model: posix InstalledDir: /usr/bin _OBJC_ALTCCVERSION_921dbbb2=none ARCH=aarch64 OPSYS=FreeBSD _OSRELEASE=13.0-CURRENT OSREL=13.0 OSVERSION=1300036 PYTHONBASE=/usr/local CONFIGURE_MAX_CMD_LEN=262144 HAVE_PORTS_ENV=1 #### Misc Poudriere #### GID=0 UID=0 DISABLE_MAKE_JOBS=poudriere ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 1048576 stack size (kbytes, -s) 1048576 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===> License GPLv3 accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===> agrum-0.15.2 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.11.1.txz [head-arm64-default-job-13] Installing pkg-1.11.1... [head-arm64-default-job-13] Extracting pkg-1.11.1: .......... done ===> agrum-0.15.2 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of agrum-0.15.2 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> License GPLv3 accepted by the user => agrumery-aGrUM-7a1c7ce5f485fff22e643c1f369637444aa02f85_GL0.tar.gz doesn't seem to exist in /portdistfiles/. => Attempting to fetch https://gitlab.com/agrumery/aGrUM/repository/7a1c7ce5f485fff22e643c1f369637444aa02f85/archive.tar.gz?dummy=/agrumery-aGrUM-7a1c7ce5f485fff22e643c1f369637444aa02f85_GL0.tar.gz agrumery-aGrUM-7a1c7ce5f485fff22e643c1f369637444aa02f85_GL0.tar 12 MB 11 MBps 01s ===> Fetching all distfiles required by agrum-0.15.2 for building =========================================================================== =======================<phase: checksum >============================ ===> License GPLv3 accepted by the user ===> Fetching all distfiles required by agrum-0.15.2 for building => SHA256 Checksum OK for agrumery-aGrUM-7a1c7ce5f485fff22e643c1f369637444aa02f85_GL0.tar.gz. =========================================================================== =======================<phase: extract-depends>============================ =========================================================================== =======================<phase: extract >============================ ===> License GPLv3 accepted by the user ===> Fetching all distfiles required by agrum-0.15.2 for building ===> Extracting for agrum-0.15.2 => SHA256 Checksum OK for agrumery-aGrUM-7a1c7ce5f485fff22e643c1f369637444aa02f85_GL0.tar.gz. =========================================================================== =======================<phase: patch-depends >============================ =========================================================================== =======================<phase: patch >============================ ===> Patching for agrum-0.15.2 ===> Applying FreeBSD patches for agrum-0.15.2 =========================================================================== =======================<phase: build-depends >============================ ===> agrum-0.15.2 depends on executable: clang80 - not found ===> Installing existing package /packages/All/llvm80-8.0.0_2.txz [head-arm64-default-job-13] Installing llvm80-8.0.0_2... [head-arm64-default-job-13] `-- Installing libedit-3.1.20190324,1... [head-arm64-default-job-13] `-- Extracting libedit-3.1.20190324,1: .......... done [head-arm64-default-job-13] `-- Installing libxml2-2.9.9... [head-arm64-default-job-13] `-- Extracting libxml2-2.9.9: .......... done [head-arm64-default-job-13] `-- Installing perl5-5.28.2... [head-arm64-default-job-13] `-- Extracting perl5-5.28.2: .......... done [head-arm64-default-job-13] `-- Installing python27-2.7.16_1... [head-arm64-default-job-13] | `-- Installing gettext-runtime-0.20.1... [head-arm64-default-job-13] | | `-- Installing indexinfo-0.3.1... [head-arm64-default-job-13] | | `-- Extracting indexinfo-0.3.1: .... done [head-arm64-default-job-13] | `-- Extracting gettext-runtime-0.20.1: .......... done [head-arm64-default-job-13] | `-- Installing libffi-3.2.1_3... [head-arm64-default-job-13] | `-- Extracting libffi-3.2.1_3: .......... done [head-arm64-default-job-13] | `-- Installing readline-8.0.0... [head-arm64-default-job-13] | `-- Extracting readline-8.0.0: .......... done [head-arm64-default-job-13] `-- Extracting python27-2.7.16_1: .......... done [head-arm64-default-job-13] Extracting llvm80-8.0.0_2: .......... done Message from perl5-5.28.2: The /usr/bin/perl symlink has been removed starting with Perl 5.20. For shebangs, you should either use: #!/usr/local/bin/perl or #!/usr/bin/env perl The first one will only work if you have a /usr/local/bin/perl, the second will work as long as perl is in PATH. Message from python27-2.7.16_1: =========================================================================== Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: bsddb databases/py-bsddb gdbm databases/py-gdbm sqlite3 databases/py-sqlite3 tkinter x11-toolkits/py-tkinter =========================================================================== ===> agrum-0.15.2 depends on executable: clang80 - found ===> Returning to build of agrum-0.15.2 ===> agrum-0.15.2 depends on file: /usr/local/bin/cmake - not found ===> Installing existing package /packages/All/cmake-3.14.5.txz [head-arm64-default-job-13] Installing cmake-3.14.5... [head-arm64-default-job-13] `-- Installing curl-7.65.3... [head-arm64-default-job-13] | `-- Installing ca_root_nss-3.45... [head-arm64-default-job-13] | `-- Extracting ca_root_nss-3.45: ........ done [head-arm64-default-job-13] | `-- Installing libnghttp2-1.39.1... [head-arm64-default-job-13] | `-- Extracting libnghttp2-1.39.1: .......... done [head-arm64-default-job-13] `-- Extracting curl-7.65.3: .......... done [head-arm64-default-job-13] `-- Installing expat-2.2.6_1... [head-arm64-default-job-13] `-- Extracting expat-2.2.6_1: .......... done [head-arm64-default-job-13] `-- Installing jsoncpp-1.8.1_6... [head-arm64-default-job-13] `-- Extracting jsoncpp-1.8.1_6: .......... done [head-arm64-default-job-13] `-- Installing libarchive-3.3.3_1,1... [head-arm64-default-job-13] | `-- Installing liblz4-1.9.1,1... [head-arm64-default-job-13] | `-- Extracting liblz4-1.9.1,1: .......... done [head-arm64-default-job-13] | `-- Installing lzo2-2.10_1... [head-arm64-default-job-13] | `-- Extracting lzo2-2.10_1: .......... done [head-arm64-default-job-13] `-- Extracting libarchive-3.3.3_1,1: .......... done [head-arm64-default-job-13] `-- Installing libuv-1.30.1... [head-arm64-default-job-13] `-- Extracting libuv-1.30.1: .......... done [head-arm64-default-job-13] `-- Installing rhash-1.3.5... [head-arm64-default-job-13] `-- Extracting rhash-1.3.5: .......... done [head-arm64-default-job-13] Extracting cmake-3.14.5: .......... done Message from ca_root_nss-3.45: ********************************* WARNING ********************************* FreeBSD does not, and can not warrant that the certification authorities whose certificates are included in this package have in any way been audited for trustworthiness or RFC 3647 compliance. Assessment and verification of trust is the complete responsibility of the system administrator. *********************************** NOTE ********************************** This package installs symlinks to support root certificates discovery by default for software that uses OpenSSL. This enables SSL Certificate Verification by client software without manual intervention. If you prefer to do this manually, replace the following symlinks with either an empty file or your site-local certificate bundle. * /etc/ssl/cert.pem * /usr/local/etc/ssl/cert.pem * /usr/local/openssl/cert.pem *************************************************************************** ===> agrum-0.15.2 depends on file: /usr/local/bin/cmake - found ===> Returning to build of agrum-0.15.2 ===> agrum-0.15.2 depends on executable: ninja - not found ===> Installing existing package /packages/All/ninja-1.9.0,2.txz [head-arm64-default-job-13] Installing ninja-1.9.0,2... [head-arm64-default-job-13] `-- Installing python36-3.6.9... [head-arm64-default-job-13] `-- Extracting python36-3.6.9: .......... done [head-arm64-default-job-13] Extracting ninja-1.9.0,2: ......... done Message from python36-3.6.9: =========================================================================== Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py36-gdbm databases/py-gdbm@py36 py36-sqlite3 databases/py-sqlite3@py36 py36-tkinter x11-toolkits/py-tkinter@py36 =========================================================================== ===> agrum-0.15.2 depends on executable: ninja - found ===> Returning to build of agrum-0.15.2 ===> agrum-0.15.2 depends on file: /usr/local/bin/python3.6 - found =========================================================================== =======================<phase: lib-depends >============================ ===> agrum-0.15.2 depends on shared library: libomp.so - not found ===> Installing existing package /packages/All/llvm80-8.0.0_2.txz [head-arm64-default-job-13] Installing llvm80-8.0.0_2... the most recent version of llvm80-8.0.0_2 is already installed ===> agrum-0.15.2 depends on shared library: libomp.so - not found *** Error code 1 Stop. make: stopped in /usr/ports/science/agrum
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