From owner-svn-ports-all@freebsd.org Tue Mar 17 18:17:17 2020 Return-Path: Delivered-To: svn-ports-all@mailman.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mailman.nyi.freebsd.org (Postfix) with ESMTP id A4DF526DCB6; Tue, 17 Mar 2020 18:17:17 +0000 (UTC) (envelope-from jrm@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) server-signature RSA-PSS (4096 bits) client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "Let's Encrypt Authority X3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 48hhGP2d10z3GPh; Tue, 17 Mar 2020 18:17:17 +0000 (UTC) (envelope-from jrm@FreeBSD.org) Received: from repo.freebsd.org (repo.freebsd.org [IPv6:2610:1c1:1:6068::e6a:0]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id 2AD7CD539; Tue, 17 Mar 2020 18:17:17 +0000 (UTC) (envelope-from jrm@FreeBSD.org) Received: from repo.freebsd.org ([127.0.1.37]) by repo.freebsd.org (8.15.2/8.15.2) with ESMTP id 02HIHHwq035355; Tue, 17 Mar 2020 18:17:17 GMT (envelope-from jrm@FreeBSD.org) Received: (from jrm@localhost) by repo.freebsd.org (8.15.2/8.15.2/Submit) id 02HIHGI7035350; Tue, 17 Mar 2020 18:17:16 GMT (envelope-from jrm@FreeBSD.org) Message-Id: <202003171817.02HIHGI7035350@repo.freebsd.org> X-Authentication-Warning: repo.freebsd.org: jrm set sender to jrm@FreeBSD.org using -f From: Joseph Mingrone Date: Tue, 17 Mar 2020 18:17:16 +0000 (UTC) To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r528590 - head/biology/hyphy X-SVN-Group: ports-head X-SVN-Commit-Author: jrm X-SVN-Commit-Paths: head/biology/hyphy X-SVN-Commit-Revision: 528590 X-SVN-Commit-Repository: ports MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit X-BeenThere: svn-ports-all@freebsd.org X-Mailman-Version: 2.1.29 Precedence: list List-Id: SVN commit messages for the ports tree List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 17 Mar 2020 18:17:17 -0000 Author: jrm Date: Tue Mar 17 18:17:16 2020 New Revision: 528590 URL: https://svnweb.freebsd.org/changeset/ports/528590 Log: biology/hyphy: Update to version 2.5.6 Upstream changes: https://github.com/veg/hyphy/releases/tag/2.5.6 Modified: head/biology/hyphy/Makefile (contents, props changed) head/biology/hyphy/distinfo (contents, props changed) head/biology/hyphy/pkg-plist (contents, props changed) Modified: head/biology/hyphy/Makefile ============================================================================== --- head/biology/hyphy/Makefile Tue Mar 17 17:45:47 2020 (r528589) +++ head/biology/hyphy/Makefile Tue Mar 17 18:17:16 2020 (r528590) @@ -1,7 +1,7 @@ # $FreeBSD$ PORTNAME= hyphy -DISTVERSION= 2.5.5 +DISTVERSION= 2.5.6 CATEGORIES= biology MAINTAINER= jrm@FreeBSD.org Modified: head/biology/hyphy/distinfo ============================================================================== --- head/biology/hyphy/distinfo Tue Mar 17 17:45:47 2020 (r528589) +++ head/biology/hyphy/distinfo Tue Mar 17 18:17:16 2020 (r528590) @@ -1,3 +1,3 @@ -TIMESTAMP = 1583110531 -SHA256 (veg-hyphy-2.5.5_GH0.tar.gz) = 9e4290bd8aa84c4ad8d6c0f63da1c74c9ece66bd56214d805edc079223f25c57 -SIZE (veg-hyphy-2.5.5_GH0.tar.gz) = 6180395 +TIMESTAMP = 1584463200 +SHA256 (veg-hyphy-2.5.6_GH0.tar.gz) = a00237763134b23cdd074849f0c4c597f161a1a26aab2c6f991d3c5c91aa5423 +SIZE (veg-hyphy-2.5.6_GH0.tar.gz) = 6141862 Modified: head/biology/hyphy/pkg-plist ============================================================================== --- head/biology/hyphy/pkg-plist Tue Mar 17 17:45:47 2020 (r528589) +++ head/biology/hyphy/pkg-plist Tue Mar 17 18:17:16 2020 (r528590) @@ -180,7 +180,6 @@ lib/hyphy/TemplateBatchFiles/SelectionAnalyses/FADE.bf lib/hyphy/TemplateBatchFiles/SelectionAnalyses/FEL-contrast.bf lib/hyphy/TemplateBatchFiles/SelectionAnalyses/FEL.bf lib/hyphy/TemplateBatchFiles/SelectionAnalyses/FUBAR.bf -lib/hyphy/TemplateBatchFiles/SelectionAnalyses/FitMultiModel.bf lib/hyphy/TemplateBatchFiles/SelectionAnalyses/MEME.bf lib/hyphy/TemplateBatchFiles/SelectionAnalyses/RELAX-Groups.bf lib/hyphy/TemplateBatchFiles/SelectionAnalyses/RELAX-SRV.bf