From nobody Sun Mar 31 21:47:37 2024 X-Original-To: dev-commits-ports-all@mlmmj.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mlmmj.nyi.freebsd.org (Postfix) with ESMTP id 4V776L0Q0Tz5GVvb; Sun, 31 Mar 2024 21:47:38 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256 client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "R3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 4V776K6V2Lz4pFX; Sun, 31 Mar 2024 21:47:37 +0000 (UTC) (envelope-from git@FreeBSD.org) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1711921657; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type: content-transfer-encoding:content-transfer-encoding; bh=j3QFRWCm7Uou680hu+j0i2Wh5dCLJbtKGBKyvlk/wt4=; b=rZOCgLuRVsBeg6cmLzLzn+oaUQb1YUCUqwQu/F8J+88KVHYOKysglYbQIutjVCdF0dfA5N IcV7zvsvzbd+aUnqGK9pxTzvc7rJekCNRjjfiWCwhMbghNijpJflbqde3ZpSkjDJ7mDHKU VKKNSYPZoEkf02FPOPPFjQMC5zpxc8KRPkF0N5BKVQk8CH5vgU72PMik+2w1AWzXwx3Bve DVznCIiY5fF1Wv74+Hbi38yNLot4/qbBgRIiQ/ypR7XEtT7/p7wre5BPaAJnKLfMn/h9o5 F1fqIbZCVH8w249Sfj/aATyBCxUX9ryAI4Blljf3zEvBN2s5iT75cuexajRv5g== ARC-Seal: i=1; s=dkim; d=freebsd.org; t=1711921657; a=rsa-sha256; cv=none; b=FlsjQ7Vn2Y6SLgznR78vwtYjZOeqqCNqQkLlLuqDxvc/27g2PoXjqnyIXxZfQZO+Z6Bau/ UW+jASUZ2f7GPQhSitY/M42upxJ4o+naITrJ9i7bK14EWHvFXQevi8cHB6KNYVRrcuk7Oj 3AiHAM+CvI1zTUve+teShB79dQkaH6iGnb+fE90K0YVENGjh7rA8qcpZBUwcBildgorGTm aiuxkN7awnKqkIs8W1sixCCoZelPe2jvzw/WoL6RaO1F6C48C3to3BalpL/0pMM2pnwd1c sTK7k/FWjlaC/Mlsu2b9ARhG8Pz7VcPMEclEIvjpF0DYvYE7qe4Tnhr2psHB9g== ARC-Authentication-Results: i=1; mx1.freebsd.org; none ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1711921657; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type: content-transfer-encoding:content-transfer-encoding; bh=j3QFRWCm7Uou680hu+j0i2Wh5dCLJbtKGBKyvlk/wt4=; b=xrITZtI8Y5f1zxheqBuCMYxWZGG3GsnQTlyMbuf4n+hBoNKaIodnvU4HssnTLpnB6RDKDA m4pg2pOu+R2eZh7anzLXhYvSvTKunfVm9FE+Geniegy5DWGbTEuqaTZIHkCSQJo3Djc0U+ XkGU2zlX4BpyqFboVPxtaMotqnQUMuTJktAVTCTcX6jefJa1Yb3W3oQeVU86Xw+saUQQpY u0PfScEzcCcHdOyZrVAOC3OsVBAS+qNLIQT+TmC7x0UWPRlnayXsp1TThX/cldNN0w7cCY PuvL+f09vxRyYZ+01TZLJQNNHK1OfAMCeTVnjC8HNfQ5+m26PXSfRPZd4JmuoQ== Received: from gitrepo.freebsd.org (gitrepo.freebsd.org [IPv6:2610:1c1:1:6068::e6a:5]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id 4V776K5vzKzvdM; Sun, 31 Mar 2024 21:47:37 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from gitrepo.freebsd.org ([127.0.1.44]) by gitrepo.freebsd.org (8.17.1/8.17.1) with ESMTP id 42VLlbCh037732; Sun, 31 Mar 2024 21:47:37 GMT (envelope-from git@gitrepo.freebsd.org) Received: (from git@localhost) by gitrepo.freebsd.org (8.17.1/8.17.1/Submit) id 42VLlbvv037728; Sun, 31 Mar 2024 21:47:37 GMT (envelope-from git) Date: Sun, 31 Mar 2024 21:47:37 GMT Message-Id: <202403312147.42VLlbvv037728@gitrepo.freebsd.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org From: Nuno Teixeira Subject: git: 9dd66e05593b - main - biology/migrate: Update to 5.0.6 List-Id: Commit messages for all branches of the ports repository List-Archive: https://lists.freebsd.org/archives/dev-commits-ports-all List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-dev-commits-ports-all@freebsd.org X-BeenThere: dev-commits-ports-all@freebsd.org MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 8bit X-Git-Committer: eduardo X-Git-Repository: ports X-Git-Refname: refs/heads/main X-Git-Reftype: branch X-Git-Commit: 9dd66e05593b3f4033cd382e03808e825cc6bfda Auto-Submitted: auto-generated The branch main has been updated by eduardo: URL: https://cgit.FreeBSD.org/ports/commit/?id=9dd66e05593b3f4033cd382e03808e825cc6bfda commit 9dd66e05593b3f4033cd382e03808e825cc6bfda Author: Nuno Teixeira AuthorDate: 2024-03-31 21:45:24 +0000 Commit: Nuno Teixeira CommitDate: 2024-03-31 21:47:26 +0000 biology/migrate: Update to 5.0.6 ChangeLog: https://peterbeerli.com/programs/migrate/distribution_4.x/HISTORY --- biology/migrate/Makefile | 6 +++++- biology/migrate/distinfo | 6 +++--- 2 files changed, 8 insertions(+), 4 deletions(-) diff --git a/biology/migrate/Makefile b/biology/migrate/Makefile index c524444a06bf..fc3734ae592f 100644 --- a/biology/migrate/Makefile +++ b/biology/migrate/Makefile @@ -1,5 +1,5 @@ PORTNAME= migrate -DISTVERSION= 5.0.5 +DISTVERSION= 5.0.6 CATEGORIES= biology MASTER_SITES= https://peterbeerli.com/migrate-html5/download_version4/ DISTNAME= ${PORTNAME}-${PORTVERSION}.src @@ -33,6 +33,10 @@ OPTIONS_DEFINE= DOCS EXAMPLES THREAD THREAD_DESC= Build with THREAD support THREAD_ALL_TARGET= thread +# Upstream tarball contains objects and binaries that need to be clean +post-extract: + cd ${WRKSRC} && ${RM} -f *.o haru/*.o migrate-n migrate-n-mpi + post-patch: @${REINPLACE_CMD} -e 's|="-O "|="$$CFLAGS"|g' ${WRKSRC}/configure @${REINPLACE_CMD} -e '/PRETTY$$/d' ${WRKSRC}/src/definitions.h diff --git a/biology/migrate/distinfo b/biology/migrate/distinfo index 498a5f72dd3d..927666e293df 100644 --- a/biology/migrate/distinfo +++ b/biology/migrate/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1711535851 -SHA256 (migrate-5.0.5.src.tar.gz) = 43d456f2432c0ec77ad33877f184d3b4b36f61e416f8fffa51077768df91ea51 -SIZE (migrate-5.0.5.src.tar.gz) = 4746835 +TIMESTAMP = 1711916315 +SHA256 (migrate-5.0.6.src.tar.gz) = 9772ae5bdc5be81af6830a9240aa5a0f90ae9fb52d70e46cf4f50a8b389f8925 +SIZE (migrate-5.0.6.src.tar.gz) = 8254038