From nobody Sat Mar 2 20:36:10 2024 X-Original-To: dev-commits-ports-main@mlmmj.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mlmmj.nyi.freebsd.org (Postfix) with ESMTP id 4TnGvG319Hz5CvdS; Sat, 2 Mar 2024 20:36:10 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256 client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "R3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 4TnGvG1xmFz4b7C; Sat, 2 Mar 2024 20:36:10 +0000 (UTC) (envelope-from git@FreeBSD.org) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1709411770; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type: content-transfer-encoding:content-transfer-encoding; bh=MM9JcYqhdqqzXym63adxVMyvxg5JPs9Z+uaKPacmZ64=; b=MLdxfj+C+8CMb6fnOVwqzl901DdasuQRyuZjZUUezwDZEE5kPh6KK9OLo/ITfS4HdumQ40 4grKj5h0CJs53OAJozzjN4QJfOUlCGSsmrWRzMeEFHZWnAiYq9rjrZq8DKWz1WHYNBJR0n cljo5Kh/3SB1vKEs/n7wnIW7SNhzD41haZghCj3LtP2te63OVNhJU4UUQ3wtc42iIY8bJO pcAY06N6kBEexd1xD6mlhCo5DpTme/SUYQ2hq/xGnPn+2oxEAH/3RxHnYG7S3C4B7c3yhY uNWQYd64RVeEy3AwlpEaOixMpUrUi807ZtLS3+f0vHN1nmjbxRXZPeRuvIp3Sg== ARC-Seal: i=1; s=dkim; d=freebsd.org; t=1709411770; a=rsa-sha256; cv=none; b=qMNusg9vz5d30vUrTW8o/Bxn/WoF4qs80La0VJuRkhVsQtocIF7Ut+jwBC6STa8dthWQsG o+DoSxY8wFQ7+N2/MC65MG4U0Rggg/Vejk6kubTvwPkkoCCbWsM7pGNHwhOepd8hO1KyRF AvXQe57OywFrXbVC6wJMdL+DXBtUai9leuIuQ2Yny/tvFY0yUv+RMc2bvqfRdtMAxphHA3 JDwD2MAUuhEcfDD9cs4HSKP2MKErxtCLnGOTejquKShcMej2q2TL5cDBRvItcv8jTDdkre Z87D9MH9U/a+b3MjpRythmDq1z1nDK9/pVY3mYbrfrRvhm7sRYHl/bS9Ig2YNg== ARC-Authentication-Results: i=1; mx1.freebsd.org; none ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1709411770; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type: content-transfer-encoding:content-transfer-encoding; bh=MM9JcYqhdqqzXym63adxVMyvxg5JPs9Z+uaKPacmZ64=; b=Orl043DEQSlRt/TVhsuu68t9eevOBQO0QuGDLdQjuAP3xz+53kvDzUtVZckg09Ivjy+s+f et0UApHoCzrh8U3Wcfa6DqH4XzZ/ajEnAIyJugI1+JyOr4WjIck/pD3t8fDPV9+UD/+yrM FXsViictujx0sFWJvJqbErNesiDbWOsiBgPZvpG7kIhic/w2Vrlz7gr+BjObNVczX6lNfF crMIE/Ebxt2tbXHpnIAV1qHZhElmtGIXxP5Z58xdnhOflqcc26PEsiZ50aotavBdWianAW LpShq//CwbpZlkNWQJVOjQBLLwH8T9ij3oVGQLpiFUSOkpU4ACJEk2vGUDkjxA== Received: from gitrepo.freebsd.org (gitrepo.freebsd.org [IPv6:2610:1c1:1:6068::e6a:5]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id 4TnGvG1Y5Fz1NvQ; Sat, 2 Mar 2024 20:36:10 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from gitrepo.freebsd.org ([127.0.1.44]) by gitrepo.freebsd.org (8.17.1/8.17.1) with ESMTP id 422KaA0p025665; Sat, 2 Mar 2024 20:36:10 GMT (envelope-from git@gitrepo.freebsd.org) Received: (from git@localhost) by gitrepo.freebsd.org (8.17.1/8.17.1/Submit) id 422KaAVj025662; Sat, 2 Mar 2024 20:36:10 GMT (envelope-from git) Date: Sat, 2 Mar 2024 20:36:10 GMT Message-Id: <202403022036.422KaAVj025662@gitrepo.freebsd.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org From: Nuno Teixeira Subject: git: 5ebea8ee6369 - main - biology/viennarna: Move man pages to share/man List-Id: Commits to the main branch of the FreeBSD ports repository List-Archive: https://lists.freebsd.org/archives/dev-commits-ports-main List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-dev-commits-ports-main@freebsd.org X-BeenThere: dev-commits-ports-main@freebsd.org MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 8bit X-Git-Committer: eduardo X-Git-Repository: ports X-Git-Refname: refs/heads/main X-Git-Reftype: branch X-Git-Commit: 5ebea8ee63694705561188cea0516d42ee214df9 Auto-Submitted: auto-generated The branch main has been updated by eduardo: URL: https://cgit.FreeBSD.org/ports/commit/?id=5ebea8ee63694705561188cea0516d42ee214df9 commit 5ebea8ee63694705561188cea0516d42ee214df9 Author: Nuno Teixeira AuthorDate: 2024-03-02 20:30:00 +0000 Commit: Nuno Teixeira CommitDate: 2024-03-02 20:35:56 +0000 biology/viennarna: Move man pages to share/man Approved by: portmgr (blanket) --- biology/viennarna/Makefile | 3 ++- biology/viennarna/pkg-plist | 66 ++++++++++++++++++++++----------------------- 2 files changed, 35 insertions(+), 34 deletions(-) diff --git a/biology/viennarna/Makefile b/biology/viennarna/Makefile index aabc57138b08..06c607940453 100644 --- a/biology/viennarna/Makefile +++ b/biology/viennarna/Makefile @@ -1,6 +1,6 @@ PORTNAME= viennarna DISTVERSION= 2.6.4 -PORTREVISION= 1 +PORTREVISION= 2 CATEGORIES= biology MASTER_SITES= https://www.tbi.univie.ac.at/RNA/download/sourcecode/2_6_x/ DISTNAME= ViennaRNA-${DISTVERSION} @@ -31,6 +31,7 @@ USES= autoreconf bison compiler:c++17-lang fortran gmake \ USE_XORG= ice x11 xext # only for build GNU_CONFIGURE= yes +GNU_CONFIGURE_MANPREFIX= ${PREFIX}/share CONFIGURE_SHELL= ${PREFIX}/bin/bash CONFIGURE_ARGS= --enable-shared --disable-static --with-gsl --with-cluster --with-kinwalker --enable-mpfr --without-python --without-python3 --without-perl diff --git a/biology/viennarna/pkg-plist b/biology/viennarna/pkg-plist index 8401e005621b..afaa24303e60 100644 --- a/biology/viennarna/pkg-plist +++ b/biology/viennarna/pkg-plist @@ -188,39 +188,39 @@ include/g2_gd.h lib/libRNA.a lib/libg2.a libdata/pkgconfig/RNAlib2.pc -man/man1/AnalyseDists.1.gz -man/man1/AnalyseSeqs.1.gz -man/man1/Kinfold.1.gz -man/man1/RNA2Dfold.1.gz -man/man1/RNALalifold.1.gz -man/man1/RNALfold.1.gz -man/man1/RNAPKplex.1.gz -man/man1/RNAaliduplex.1.gz -man/man1/RNAalifold.1.gz -man/man1/RNAcofold.1.gz -man/man1/RNAdistance.1.gz -man/man1/RNAdos.1.gz -man/man1/RNAduplex.1.gz -man/man1/RNAeval.1.gz -man/man1/RNAfold.1.gz -man/man1/RNAforester.1.gz -man/man1/RNAheat.1.gz -man/man1/RNAinverse.1.gz -man/man1/RNAlocmin.1.gz -man/man1/RNAmultifold.1.gz -man/man1/RNApaln.1.gz -man/man1/RNAparconv.1.gz -man/man1/RNApdist.1.gz -man/man1/RNAplex.1.gz -man/man1/RNAplfold.1.gz -man/man1/RNAplot.1.gz -man/man1/RNApvmin.1.gz -man/man1/RNAsnoop.1.gz -man/man1/RNAsubopt.1.gz -man/man1/RNAup.1.gz -man/man1/RNAxplorer.1.gz -man/man1/ct2db.1.gz -man/man1/kinwalker.1.gz +share/man/man1/AnalyseDists.1.gz +share/man/man1/AnalyseSeqs.1.gz +share/man/man1/Kinfold.1.gz +share/man/man1/RNA2Dfold.1.gz +share/man/man1/RNALalifold.1.gz +share/man/man1/RNALfold.1.gz +share/man/man1/RNAPKplex.1.gz +share/man/man1/RNAaliduplex.1.gz +share/man/man1/RNAalifold.1.gz +share/man/man1/RNAcofold.1.gz +share/man/man1/RNAdistance.1.gz +share/man/man1/RNAdos.1.gz +share/man/man1/RNAduplex.1.gz +share/man/man1/RNAeval.1.gz +share/man/man1/RNAfold.1.gz +share/man/man1/RNAforester.1.gz +share/man/man1/RNAheat.1.gz +share/man/man1/RNAinverse.1.gz +share/man/man1/RNAlocmin.1.gz +share/man/man1/RNAmultifold.1.gz +share/man/man1/RNApaln.1.gz +share/man/man1/RNAparconv.1.gz +share/man/man1/RNApdist.1.gz +share/man/man1/RNAplex.1.gz +share/man/man1/RNAplfold.1.gz +share/man/man1/RNAplot.1.gz +share/man/man1/RNApvmin.1.gz +share/man/man1/RNAsnoop.1.gz +share/man/man1/RNAsubopt.1.gz +share/man/man1/RNAup.1.gz +share/man/man1/RNAxplorer.1.gz +share/man/man1/ct2db.1.gz +share/man/man1/kinwalker.1.gz share/ViennaRNA/2Dlandscape.R share/ViennaRNA/2Dlandscape_mfe.gri share/ViennaRNA/2Dlandscape_pf.gri