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ESMTPS id 4TnDzb213lz1LrT; Sat, 2 Mar 2024 19:09:47 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from gitrepo.freebsd.org ([127.0.1.44]) by gitrepo.freebsd.org (8.17.1/8.17.1) with ESMTP id 422J9l6A074030; Sat, 2 Mar 2024 19:09:47 GMT (envelope-from git@gitrepo.freebsd.org) Received: (from git@localhost) by gitrepo.freebsd.org (8.17.1/8.17.1/Submit) id 422J9lj1074027; Sat, 2 Mar 2024 19:09:47 GMT (envelope-from git) Date: Sat, 2 Mar 2024 19:09:47 GMT Message-Id: <202403021909.422J9lj1074027@gitrepo.freebsd.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org From: Nuno Teixeira Subject: git: b73c0ced999a - main - biology/fastq-trim: Move man pages to share/man List-Id: Commit messages for all branches of the ports repository List-Archive: https://lists.freebsd.org/archives/dev-commits-ports-all List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-dev-commits-ports-all@freebsd.org X-BeenThere: dev-commits-ports-all@freebsd.org MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 8bit X-Git-Committer: eduardo X-Git-Repository: ports X-Git-Refname: refs/heads/main X-Git-Reftype: branch X-Git-Commit: b73c0ced999a225aa33bf9fa2384c04baac03827 Auto-Submitted: auto-generated The branch main has been updated by eduardo: URL: https://cgit.FreeBSD.org/ports/commit/?id=b73c0ced999a225aa33bf9fa2384c04baac03827 commit b73c0ced999a225aa33bf9fa2384c04baac03827 Author: Nuno Teixeira AuthorDate: 2024-03-02 19:08:45 +0000 Commit: Nuno Teixeira CommitDate: 2024-03-02 19:08:45 +0000 biology/fastq-trim: Move man pages to share/man Approved by: portmgr (blanket) --- biology/fastq-trim/Makefile | 3 +- biology/fastq-trim/pkg-plist | 136 +++++++++++++++++++++---------------------- 2 files changed, 70 insertions(+), 69 deletions(-) diff --git a/biology/fastq-trim/Makefile b/biology/fastq-trim/Makefile index e318ef55a7fb..1665ae11e1f1 100644 --- a/biology/fastq-trim/Makefile +++ b/biology/fastq-trim/Makefile @@ -1,5 +1,6 @@ PORTNAME= fastq-trim DISTVERSION= 0.1.3 +PORTREVISION= 1 CATEGORIES= biology MAINTAINER= jwb@FreeBSD.org @@ -15,7 +16,7 @@ USE_GITHUB= yes GH_ACCOUNT= outpaddling -MAKE_ENV= VERSION=${PORTVERSION} +MAKE_ENV= VERSION=${PORTVERSION} MANPREFIX=${PREFIX}/share pre-build: (cd ${WRKSRC} && ${MAKE} LOCALBASE=${LOCALBASE} depend) diff --git a/biology/fastq-trim/pkg-plist b/biology/fastq-trim/pkg-plist index 244c4f4b208a..f2bb14b061f9 100644 --- a/biology/fastq-trim/pkg-plist +++ b/biology/fastq-trim/pkg-plist @@ -5,71 +5,71 @@ include/fastq-trim-mutators.h include/fastq-trim-rvs.h include/fastq-trim.h lib/libfastq-trim.a -man/man1/fastq-scum.1.gz -man/man1/fastq-trim.1.gz -man/man3/FASTQ_TRIM_ADAPTER1.3.gz -man/man3/FASTQ_TRIM_ADAPTER1_AE.3.gz -man/man3/FASTQ_TRIM_ADAPTER2.3.gz -man/man3/FASTQ_TRIM_ADAPTER2_AE.3.gz -man/man3/FASTQ_TRIM_ADAPTER_MATCH_FUNCTION.3.gz -man/man3/FASTQ_TRIM_INFILE1.3.gz -man/man3/FASTQ_TRIM_INFILE1_AE.3.gz -man/man3/FASTQ_TRIM_INFILE2.3.gz -man/man3/FASTQ_TRIM_INFILE2_AE.3.gz -man/man3/FASTQ_TRIM_INSTREAM1.3.gz -man/man3/FASTQ_TRIM_INSTREAM1_AE.3.gz -man/man3/FASTQ_TRIM_INSTREAM2.3.gz -man/man3/FASTQ_TRIM_INSTREAM2_AE.3.gz -man/man3/FASTQ_TRIM_MAX_MISMATCH_PERCENT.3.gz -man/man3/FASTQ_TRIM_MIN_LENGTH.3.gz -man/man3/FASTQ_TRIM_MIN_MATCH.3.gz -man/man3/FASTQ_TRIM_MIN_QUAL.3.gz -man/man3/FASTQ_TRIM_OUTFILE1.3.gz -man/man3/FASTQ_TRIM_OUTFILE1_AE.3.gz -man/man3/FASTQ_TRIM_OUTFILE2.3.gz -man/man3/FASTQ_TRIM_OUTFILE2_AE.3.gz -man/man3/FASTQ_TRIM_OUTSTREAM1.3.gz -man/man3/FASTQ_TRIM_OUTSTREAM1_AE.3.gz -man/man3/FASTQ_TRIM_OUTSTREAM2.3.gz -man/man3/FASTQ_TRIM_OUTSTREAM2_AE.3.gz -man/man3/FASTQ_TRIM_PHRED_BASE.3.gz -man/man3/FASTQ_TRIM_POLYA_MIN_LEN.3.gz -man/man3/FASTQ_TRIM_VERBOSE.3.gz -man/man3/fastq_trim_set_adapter1.3.gz -man/man3/fastq_trim_set_adapter1_ae.3.gz -man/man3/fastq_trim_set_adapter1_cpy.3.gz -man/man3/fastq_trim_set_adapter2.3.gz -man/man3/fastq_trim_set_adapter2_ae.3.gz -man/man3/fastq_trim_set_adapter2_cpy.3.gz -man/man3/fastq_trim_set_adapter_match_function.3.gz -man/man3/fastq_trim_set_infile1.3.gz -man/man3/fastq_trim_set_infile1_ae.3.gz -man/man3/fastq_trim_set_infile1_cpy.3.gz -man/man3/fastq_trim_set_infile2.3.gz -man/man3/fastq_trim_set_infile2_ae.3.gz -man/man3/fastq_trim_set_infile2_cpy.3.gz -man/man3/fastq_trim_set_instream1.3.gz -man/man3/fastq_trim_set_instream1_ae.3.gz -man/man3/fastq_trim_set_instream1_cpy.3.gz -man/man3/fastq_trim_set_instream2.3.gz -man/man3/fastq_trim_set_instream2_ae.3.gz -man/man3/fastq_trim_set_instream2_cpy.3.gz -man/man3/fastq_trim_set_max_mismatch_percent.3.gz -man/man3/fastq_trim_set_min_length.3.gz -man/man3/fastq_trim_set_min_match.3.gz -man/man3/fastq_trim_set_min_qual.3.gz -man/man3/fastq_trim_set_outfile1.3.gz -man/man3/fastq_trim_set_outfile1_ae.3.gz -man/man3/fastq_trim_set_outfile1_cpy.3.gz -man/man3/fastq_trim_set_outfile2.3.gz -man/man3/fastq_trim_set_outfile2_ae.3.gz -man/man3/fastq_trim_set_outfile2_cpy.3.gz -man/man3/fastq_trim_set_outstream1.3.gz -man/man3/fastq_trim_set_outstream1_ae.3.gz -man/man3/fastq_trim_set_outstream1_cpy.3.gz -man/man3/fastq_trim_set_outstream2.3.gz -man/man3/fastq_trim_set_outstream2_ae.3.gz -man/man3/fastq_trim_set_outstream2_cpy.3.gz -man/man3/fastq_trim_set_phred_base.3.gz -man/man3/fastq_trim_set_polya_min_len.3.gz -man/man3/fastq_trim_set_verbose.3.gz +share/man/man1/fastq-scum.1.gz +share/man/man1/fastq-trim.1.gz +share/man/man3/FASTQ_TRIM_ADAPTER1.3.gz +share/man/man3/FASTQ_TRIM_ADAPTER1_AE.3.gz +share/man/man3/FASTQ_TRIM_ADAPTER2.3.gz +share/man/man3/FASTQ_TRIM_ADAPTER2_AE.3.gz +share/man/man3/FASTQ_TRIM_ADAPTER_MATCH_FUNCTION.3.gz +share/man/man3/FASTQ_TRIM_INFILE1.3.gz +share/man/man3/FASTQ_TRIM_INFILE1_AE.3.gz +share/man/man3/FASTQ_TRIM_INFILE2.3.gz +share/man/man3/FASTQ_TRIM_INFILE2_AE.3.gz +share/man/man3/FASTQ_TRIM_INSTREAM1.3.gz +share/man/man3/FASTQ_TRIM_INSTREAM1_AE.3.gz +share/man/man3/FASTQ_TRIM_INSTREAM2.3.gz +share/man/man3/FASTQ_TRIM_INSTREAM2_AE.3.gz +share/man/man3/FASTQ_TRIM_MAX_MISMATCH_PERCENT.3.gz +share/man/man3/FASTQ_TRIM_MIN_LENGTH.3.gz +share/man/man3/FASTQ_TRIM_MIN_MATCH.3.gz +share/man/man3/FASTQ_TRIM_MIN_QUAL.3.gz +share/man/man3/FASTQ_TRIM_OUTFILE1.3.gz +share/man/man3/FASTQ_TRIM_OUTFILE1_AE.3.gz +share/man/man3/FASTQ_TRIM_OUTFILE2.3.gz +share/man/man3/FASTQ_TRIM_OUTFILE2_AE.3.gz +share/man/man3/FASTQ_TRIM_OUTSTREAM1.3.gz +share/man/man3/FASTQ_TRIM_OUTSTREAM1_AE.3.gz +share/man/man3/FASTQ_TRIM_OUTSTREAM2.3.gz +share/man/man3/FASTQ_TRIM_OUTSTREAM2_AE.3.gz +share/man/man3/FASTQ_TRIM_PHRED_BASE.3.gz +share/man/man3/FASTQ_TRIM_POLYA_MIN_LEN.3.gz +share/man/man3/FASTQ_TRIM_VERBOSE.3.gz +share/man/man3/fastq_trim_set_adapter1.3.gz +share/man/man3/fastq_trim_set_adapter1_ae.3.gz +share/man/man3/fastq_trim_set_adapter1_cpy.3.gz +share/man/man3/fastq_trim_set_adapter2.3.gz +share/man/man3/fastq_trim_set_adapter2_ae.3.gz +share/man/man3/fastq_trim_set_adapter2_cpy.3.gz +share/man/man3/fastq_trim_set_adapter_match_function.3.gz +share/man/man3/fastq_trim_set_infile1.3.gz +share/man/man3/fastq_trim_set_infile1_ae.3.gz +share/man/man3/fastq_trim_set_infile1_cpy.3.gz +share/man/man3/fastq_trim_set_infile2.3.gz +share/man/man3/fastq_trim_set_infile2_ae.3.gz +share/man/man3/fastq_trim_set_infile2_cpy.3.gz +share/man/man3/fastq_trim_set_instream1.3.gz +share/man/man3/fastq_trim_set_instream1_ae.3.gz +share/man/man3/fastq_trim_set_instream1_cpy.3.gz +share/man/man3/fastq_trim_set_instream2.3.gz +share/man/man3/fastq_trim_set_instream2_ae.3.gz +share/man/man3/fastq_trim_set_instream2_cpy.3.gz +share/man/man3/fastq_trim_set_max_mismatch_percent.3.gz +share/man/man3/fastq_trim_set_min_length.3.gz +share/man/man3/fastq_trim_set_min_match.3.gz +share/man/man3/fastq_trim_set_min_qual.3.gz +share/man/man3/fastq_trim_set_outfile1.3.gz +share/man/man3/fastq_trim_set_outfile1_ae.3.gz +share/man/man3/fastq_trim_set_outfile1_cpy.3.gz +share/man/man3/fastq_trim_set_outfile2.3.gz +share/man/man3/fastq_trim_set_outfile2_ae.3.gz +share/man/man3/fastq_trim_set_outfile2_cpy.3.gz +share/man/man3/fastq_trim_set_outstream1.3.gz +share/man/man3/fastq_trim_set_outstream1_ae.3.gz +share/man/man3/fastq_trim_set_outstream1_cpy.3.gz +share/man/man3/fastq_trim_set_outstream2.3.gz +share/man/man3/fastq_trim_set_outstream2_ae.3.gz +share/man/man3/fastq_trim_set_outstream2_cpy.3.gz +share/man/man3/fastq_trim_set_phred_base.3.gz +share/man/man3/fastq_trim_set_polya_min_len.3.gz +share/man/man3/fastq_trim_set_verbose.3.gz