Date: Tue, 29 Jun 2021 01:14:08 GMT From: pkg-fallout@FreeBSD.org To: yuri@FreeBSD.org Cc: pkg-fallout@FreeBSD.org Subject: [package - 130i386-quarterly][biology/cytoscape] Failed for cytoscape-3.6.1 in build Message-ID: <202106290114.15T1E8ge078939@beefy13.nyi.freebsd.org>
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You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: yuri@FreeBSD.org Log URL: http://beefy13.nyi.freebsd.org/data/130i386-quarterly/ae162bd98935/logs/cytoscape-3.6.1.log Build URL: http://beefy13.nyi.freebsd.org/build.html?mastername=130i386-quarterly&build=ae162bd98935 Log: =>> Building biology/cytoscape build started at Tue Jun 29 01:12:47 UTC 2021 port directory: /usr/ports/biology/cytoscape package name: cytoscape-3.6.1 building for: FreeBSD 130i386-quarterly-job-12 13.0-RELEASE-p2 FreeBSD 13.0-RELEASE-p2 i386 maintained by: yuri@FreeBSD.org Makefile ident: Poudriere version: 3.2.8-8-gaf08dbda Host OSVERSION: 1400008 Jail OSVERSION: 1300139 Job Id: 12 ---Begin Environment--- SHELL=/bin/csh UNAME_p=i386 UNAME_m=i386 OSVERSION=1300139 UNAME_v=FreeBSD 13.0-RELEASE-p2 UNAME_r=13.0-RELEASE-p2 BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-8-gaf08dbda MASTERMNT=/usr/local/poudriere/data/.m/130i386-quarterly/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= PWD=/usr/local/poudriere/data/.m/130i386-quarterly/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=130i386-quarterly SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/130i386-quarterly/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/biology/cytoscape/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/cytoscape/work HOME=/wrkdirs/usr/ports/biology/cytoscape/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/cytoscape/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/biology/cytoscape/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/cytoscape/work HOME=/wrkdirs/usr/ports/biology/cytoscape/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/cytoscape/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- JAVASHAREDIR="share/java" JAVAJARDIR="share/java/classes" OSREL=13.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/cytoscape" EXAMPLESDIR="share/examples/cytoscape" DATADIR="share/cytoscape" WWWDIR="www/cytoscape" ETCDIR="etc/cytoscape" --End PLIST_SUB-- --SUB_LIST-- JAVASHAREDIR="/usr/local/share/java" JAVAJARDIR="/usr/local/share/java/classes" JAVALIBDIR="/usr/local/share/java/classes" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/cytoscape DOCSDIR=/usr/local/share/doc/cytoscape EXAMPLESDIR=/usr/local/share/examples/cytoscape WWWDIR=/usr/local/www/cytoscape ETCDIR=/usr/local/etc/cytoscape --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes MACHINE=i386 MACHINE_ARCH=i386 ARCH=${MACHINE_ARCH} #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 #### /usr/ports/Mk/Scripts/ports_env.sh #### _CCVERSION_921dbbb2=FreeBSD clang version 11.0.1 (git@github.com:llvm/llvm-project.git llvmorg-11.0.1-0-g43ff75f2c3fe) Target: i386-unknown-freebsd13.0 Thread model: posix InstalledDir: /usr/bin _ALTCCVERSION_921dbbb2=none _CXXINTERNAL_acaad9ca=FreeBSD clang version 11.0.1 (git@github.com:llvm/llvm-project.git llvmorg-11.0.1-0-g43ff75f2c3fe) Target: i386-unknown-freebsd13.0 Thread model: posix InstalledDir: /usr/bin "/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-m" "elf_i386_fbsd" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_921dbbb2_58173849=yes CC_OUTPUT_921dbbb2_9bdba57c=yes CC_OUTPUT_921dbbb2_6a4fe7f5=yes CC_OUTPUT_921dbbb2_6bcac02b=yes CC_OUTPUT_921dbbb2_67d20829=yes CC_OUTPUT_921dbbb2_bfa62e83=yes CC_OUTPUT_921dbbb2_f0b4d593=yes CC_OUTPUT_921dbbb2_308abb44=yes CC_OUTPUT_921dbbb2_f00456e5=yes CC_OUTPUT_921dbbb2_65ad290d=yes CC_OUTPUT_921dbbb2_f2776b26=yes CC_OUTPUT_921dbbb2_b2657cc3=yes CC_OUTPUT_921dbbb2_380987f7=yes CC_OUTPUT_921dbbb2_160933ec=yes CC_OUTPUT_921dbbb2_fb62803b=yes _OBJC_CCVERSION_921dbbb2=FreeBSD clang version 11.0.1 (git@github.com:llvm/llvm-project.git llvmorg-11.0.1-0-g43ff75f2c3fe) Target: i386-unknown-freebsd13.0 Thread model: posix InstalledDir: /usr/bin _OBJC_ALTCCVERSION_921dbbb2=none ARCH=i386 OPSYS=FreeBSD _OSRELEASE=13.0-RELEASE-p2 OSREL=13.0 OSVERSION=1300139 PYTHONBASE=/usr/local CONFIGURE_MAX_CMD_LEN=524288 HAVE_PORTS_ENV=1 #### Misc Poudriere #### GID=0 UID=0 DISABLE_MAKE_JOBS=poudriere ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 524288 stack size (kbytes, -s) 65536 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===> License LGPL21 accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===> cytoscape-3.6.1 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.16.3.txz [130i386-quarterly-job-12] Installing pkg-1.16.3... [130i386-quarterly-job-12] Extracting pkg-1.16.3: .......... done ===> cytoscape-3.6.1 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of cytoscape-3.6.1 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> License LGPL21 accepted by the user ===> Fetching all distfiles required by cytoscape-3.6.1 for building =========================================================================== =======================<phase: checksum >============================ ===> License LGPL21 accepted by the user ===> Fetching all distfiles required by cytoscape-3.6.1 for building => SHA256 Checksum OK for FreeBSD-cytoscape-3.6.1-maven-repository.tar.gz. => SHA256 Checksum OK for cytoscape-cytoscape-3.6.1_GH0.tar.gz. => SHA256 Checksum OK for cytoscape-cytoscape-parent-3.6.1_GH0.tar.gz. => SHA256 Checksum OK for cytoscape-cytoscape-api-3.6.1_GH0.tar.gz. => SHA256 Checksum OK for cytoscape-cytoscape-impl-3.6.1_GH0.tar.gz. => SHA256 Checksum OK for cytoscape-cytoscape-support-3.6.1_GH0.tar.gz. => SHA256 Checksum OK for cytoscape-cytoscape-gui-distribution-3.6.1_GH0.tar.gz. => SHA256 Checksum OK for cytoscape-cytoscape-app-template-3.6.1_GH0.tar.gz. =========================================================================== =======================<phase: extract-depends>============================ =========================================================================== =======================<phase: extract >============================ ===> License LGPL21 accepted by the user ===> Fetching all distfiles required by cytoscape-3.6.1 for building ===> Extracting for cytoscape-3.6.1 => SHA256 Checksum OK for FreeBSD-cytoscape-3.6.1-maven-repository.tar.gz. => SHA256 Checksum OK for cytoscape-cytoscape-3.6.1_GH0.tar.gz. => SHA256 Checksum OK for cytoscape-cytoscape-parent-3.6.1_GH0.tar.gz. => SHA256 Checksum OK for cytoscape-cytoscape-api-3.6.1_GH0.tar.gz. => SHA256 Checksum OK for cytoscape-cytoscape-impl-3.6.1_GH0.tar.gz. => SHA256 Checksum OK for cytoscape-cytoscape-support-3.6.1_GH0.tar.gz. => SHA256 Checksum OK for cytoscape-cytoscape-gui-distribution-3.6.1_GH0.tar.gz. => SHA256 Checksum OK for cytoscape-cytoscape-app-template-3.6.1_GH0.tar.gz. =========================================================================== =======================<phase: patch-depends >============================ =========================================================================== =======================<phase: patch >============================ ===> Patching for cytoscape-3.6.1 =========================================================================== =======================<phase: build-depends >============================ <snip> [INFO] Writing OBR metadata [INFO] [INFO] ------------------------------------------------------------------------ [INFO] Skipping Cytoscape GUI-Distribution Integration Test (integration-test) [INFO] This project has been banned from the build due to previous failures. [INFO] ------------------------------------------------------------------------ [INFO] [INFO] ----------------< org.cytoscape.distribution:features >----------------- [INFO] Building Cytoscape Feature Repository 3.6.1 [27/117] [INFO] --------------------------------[ pom ]--------------------------------- [INFO] [INFO] --- maven-resources-plugin:2.6:copy-resources (copy-resources) @ features --- [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 1 resource [INFO] [INFO] >>> maven-source-plugin:2.4:jar (attach-sources) > generate-sources @ features >>> [INFO] [INFO] --- maven-resources-plugin:2.6:copy-resources (copy-resources) @ features --- [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 1 resource [INFO] [INFO] <<< maven-source-plugin:2.4:jar (attach-sources) < generate-sources @ features <<< [INFO] [INFO] [INFO] --- maven-source-plugin:2.4:jar (attach-sources) @ features --- [INFO] [INFO] --- build-helper-maven-plugin:1.7:attach-artifact (attach-artifacts) @ features --- [INFO] [INFO] --- maven-install-plugin:2.4:install (default-install) @ features --- [INFO] Installing /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/gui-distribution/features/pom.xml to /wrkdirs/usr/ports/biology/cytoscape/work/.m2/repository/org/cytoscape/distribution/features/3.6.1/features-3.6.1.pom [INFO] Installing /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/gui-distribution/features/target/features.xml to /wrkdirs/usr/ports/biology/cytoscape/work/.m2/repository/org/cytoscape/distribution/features/3.6.1/features-3.6.1-features.xml [INFO] [INFO] ----------------< org.cytoscape.distribution:cytoscape >---------------- [INFO] Building Cytoscape Karaf Distribution 3.6.1 [28/117] [INFO] --------------------------------[ pom ]--------------------------------- [WARNING] The POM for jline:jline:jar:2.12 is missing, no dependency information available [WARNING] The POM for org.slf4j:slf4j-api:jar:1.6.6 is missing, no dependency information available [WARNING] The POM for org.eclipse:org.eclipse.osgi:jar:3.8.2.v20130124-134944 is missing, no dependency information available [WARNING] The POM for org.jledit:core:jar:0.2.1 is missing, no dependency information available [INFO] [INFO] ------------------------------------------------------------------------ [INFO] Skipping Distribution [INFO] This project has been banned from the build due to previous failures. [INFO] ------------------------------------------------------------------------ [INFO] [INFO] -----------------------< org.cytoscape:project >------------------------ [INFO] Building Cytoscape Project POM 3.6.1 [29/117] [INFO] --------------------------------[ pom ]--------------------------------- [INFO] [INFO] --- maven-install-plugin:2.4:install (default-install) @ project --- [INFO] Installing /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/pom.xml to /wrkdirs/usr/ports/biology/cytoscape/work/.m2/repository/org/cytoscape/project/3.6.1/project-3.6.1.pom [INFO] ------------------------------------------------------------------------ [INFO] Reactor Summary for Cytoscape Project POM 3.6.1: [INFO] [INFO] Basic Cytoscape POM Configuration .................. SUCCESS [ 0.197 s] [INFO] Cytoscape API Parent Project POM ................... SUCCESS [ 2.572 s] [INFO] Cytoscape Documentation Taglets .................... FAILURE [ 0.029 s] [INFO] Cytoscape Event API (event-api) .................... FAILURE [ 0.011 s] [INFO] Cytoscape Model API (model-api) .................... SKIPPED [INFO] Cytoscape Service API (service-api) ................ FAILURE [ 0.005 s] [INFO] Cytoscape View Model API (viewmodel-api) ........... SKIPPED [INFO] Cytoscape CI API (ci-api) .......................... SUCCESS [ 1.333 s] [INFO] Cytoscape Work API (work-api) ...................... FAILURE [ 0.008 s] [INFO] Cytoscape Presentation API (presentation-api) ...... SKIPPED [INFO] Cytoscape Application API (application-api) ........ SKIPPED [INFO] Cytoscape Property API (property-api) .............. SKIPPED [INFO] Cytoscape VizMap API (vizmap-api) .................. SKIPPED [INFO] Cytoscape Session API (session-api) ................ SKIPPED [INFO] Cytoscape Filter API (filter-api) .................. SKIPPED [INFO] Cytoscape IO API (io-api) .......................... SKIPPED [INFO] Cytoscape Core Task API (core-task-api) ............ SKIPPED [INFO] Cytoscape Equations API (equations-api) ............ SKIPPED [INFO] Cytoscape Layout API (layout-api) .................. SKIPPED [INFO] Cytoscape Groups API (group-api) ................... SKIPPED [INFO] Cytoscape Groups API (jobs-api) .................... SKIPPED [INFO] Cytoscape Webservice API (webservice-api) .......... SKIPPED [INFO] Cytoscape Data Source API (datasource-api) ......... SKIPPED [INFO] Cytoscape Command Executor API (command-executor-api) SKIPPED [INFO] Cytoscape App API (app-api) ........................ SKIPPED [INFO] Cytoscape Work Swing API (work-swing-api) .......... SKIPPED [INFO] Cytoscape Swing Application API (swing-application-api) SKIPPED [INFO] Cytoscape VizMap GUI API (vizmap-gui-api) .......... SKIPPED [INFO] Cytoscape Swing Utility API (swing-util-api) ....... FAILURE [ 0.007 s] [INFO] Cytoscape Webservice Swing API (webservice-swing-api) SKIPPED [INFO] Cytoscape Swing App API (swing-app-api) ............ SKIPPED [INFO] Cytoscape Util API (util-api) ...................... SKIPPED [INFO] Cytoscape API (api-bundle) ......................... SKIPPED [INFO] Cytoscape Implementation Parent Project POM ........ SKIPPED [INFO] Cytoscape Equations Impl (equations-impl) .......... SKIPPED [INFO] Cytoscape Model Impl Parent (model-impl-parent) .... SKIPPED [INFO] Cytoscape Model Impl (model-impl) .................. SKIPPED [INFO] Cytoscape Command Executor Impl (command-executor-impl) SKIPPED [INFO] Cytoscape Ding Impl Parent (ding-impl) ............. SKIPPED [INFO] Cytoscape Ding View/Presentation Impl (ding-presentation-impl) SKIPPED [INFO] Cytoscape View Model Impl Parent (viewmodel-impl-parent) SKIPPED [INFO] Cytoscape View Model Impl (viewmodel-impl) ......... SKIPPED [INFO] Cytoscape Groups Impl (group-impl) ................. SKIPPED [INFO] Cytoscape Event Impl Parent (event-impl-parent) .... SKIPPED [INFO] Cytoscape Event Impl (event-impl) .................. SKIPPED [INFO] Cytoscape Filters Impl (filter-impl) ............... SKIPPED [INFO] Cytoscape Filters 2 Impl (filter2-impl) ............ SKIPPED [INFO] Cytoscape IO Impl Parent (io-impl-parent) .......... SKIPPED [INFO] Cytoscape IO Impl (io-impl) ........................ SKIPPED [INFO] Cytoscape Layout Impl (layout-impl) ................ SKIPPED [INFO] Cytoscape Ding View/Presentation Impl Performance (ding-impl-performance-debug) SKIPPED [INFO] Cytoscape Editor Impl (editor-impl) ................ SKIPPED [INFO] Cytoscape Equation Functions Impl (equations-functions-impl) SKIPPED [INFO] Cytoscape GraphML Impl (graphml-impl) .............. SKIPPED [INFO] Cytoscape IO Impl Performance (io-impl-performance) SKIPPED [INFO] Cytoscape Jobs Impl (jobs-impl) .................... SKIPPED [INFO] Cytoscape Layout Algorithms Impl (layout-cytoscape-impl) SKIPPED [INFO] Cytoscape JGraph Layout Impl (layout-jgraph-impl) .. SKIPPED [INFO] Cytoscape Prefuse Layout Impl (layout-prefuse-impl) SKIPPED [INFO] Cytoscape Linkout Impl (linkout-impl) .............. SKIPPED [INFO] Cytoscape Log Swing Impl (log-swing-impl) .......... SKIPPED [INFO] Cytoscape Manual Layout Impl (manual-layout-impl) .. SKIPPED [INFO] Cytoscape Model Impl Performance Debug (model-impl-performance-debug) SKIPPED [INFO] Cytoscape Model Impl Table Performance Debug (model-impl-table-performance-debug) SKIPPED [INFO] Cytoscape App Impl (app-impl) ...................... SKIPPED [INFO] Cytoscape Presentation Impl (presentation-impl) .... SKIPPED [INFO] Cytoscape Property Impl (property-impl) ............ SKIPPED [INFO] Cytoscape Search Impl (search-impl) ................ SKIPPED [INFO] Cytoscape Session Impl (session-impl) .............. SKIPPED [INFO] Cytoscape Swing Utility Impl (swing-util-impl) ..... SKIPPED [INFO] Cytoscape Swing Application Impl (swing-application-impl) SKIPPED [INFO] Cytoscape Table Browser Impl (table-browser-impl) .. SKIPPED [INFO] Cytoscape Table Import Impl (table-import-impl) .... SKIPPED [INFO] Cytoscape VizMap GUI Core Impl (vizmap-gui-core-impl) SKIPPED [INFO] Cytoscape VizMap GUI Impl (vizmap-gui-impl) ........ SKIPPED [INFO] Cytoscape VizMap Impl Parent (vizmap-impl-parent) .. SKIPPED [INFO] Cytoscape VizMap Impl (vizmap-impl) ................ SKIPPED [INFO] Cytoscape Webservice Impl (webservice-impl) ........ SKIPPED [INFO] org.cytoscape.work-headless-impl ................... SKIPPED [INFO] org.cytoscape.work-impl ............................ SKIPPED [INFO] Cytoscape Work Swing Impl Parent (work-swing-impl-parent) SKIPPED [INFO] Cytoscape Work Swing Impl (work-swing-impl) ........ SKIPPED [INFO] Cytoscape Application Impl (application-impl) ...... SKIPPED [INFO] Cytoscape Datasource Impl (datasource-impl) ........ SKIPPED [INFO] Cytoscape Support Parent Project POM ............... SUCCESS [ 0.007 s] [INFO] Cytoscape Launch Framework ......................... SUCCESS [ 0.007 s] [INFO] CommandLine Provider ............................... SUCCESS [ 0.257 s] [INFO] Cytoscape GUI Command Line Parser Impl (gui-cmdline-parser-impl) SKIPPED [INFO] Cytoscape Edge Bundler Impl (edge-bundler-impl) .... SKIPPED [INFO] Cytoscape Scripting Impl (scripting-impl) .......... SKIPPED [INFO] Cytoscape Core Task Impl (core-task-impl) .......... SKIPPED [INFO] Cytoscape Headless Application Impl (headless-application-impl) SKIPPED [INFO] org.cytoscape.cy-commons-cli ....................... FAILURE [ 0.004 s] [INFO] Cytoscape Headless Command Line Parser Impl (headless-cmdline-parser-impl) SKIPPED [INFO] Cytoscape 3 App Archetypes Parent .................. SUCCESS [ 0.090 s] [INFO] Cytoscape 3 Archetype - Creates an App providing public API SUCCESS [ 0.203 s] [INFO] Cytoscape 3 Archetype - Creates an App with a Task . SUCCESS [ 0.019 s] [INFO] Cytoscape 3 Archetype - Creates a CyAction (menu item) for desktop application SUCCESS [ 0.019 s] [INFO] Cytoscape 3 Archetype - Creates a Meta-App to install multiple related apps SUCCESS [ 0.018 s] [INFO] org.cytoscape.integration-test-support ............. FAILURE [ 0.014 s] [INFO] Launcher ........................................... SUCCESS [ 0.629 s] [INFO] StartLevel Assembly ................................ SUCCESS [ 0.019 s] [INFO] Tasks for Testing .................................. SKIPPED [INFO] Cytoscape Desktop Application Distribution ......... SUCCESS [ 0.004 s] [INFO] Cytoscape Third-Party Dependencies (third-party) ... FAILURE [ 0.023 s] [INFO] SplashScreen Launcher .............................. SUCCESS [ 1.410 s] [INFO] Cytoscape Launcher ................................. FAILURE [ 0.008 s] [INFO] Splash Updater ..................................... SKIPPED [INFO] Cytoscape Command Line Provider Implementation ..... SKIPPED [INFO] Cytoscape Diagnostics .............................. SKIPPED [INFO] Cytoscape Branding ................................. SUCCESS [ 0.358 s] [INFO] Cytoscape Application Implementation Metadata ...... SUCCESS [ 0.171 s] [INFO] Cytoscape GUI-Distribution Integration Test (integration-test) SKIPPED [INFO] Cytoscape Feature Repository ....................... SUCCESS [ 0.044 s] [INFO] Cytoscape Karaf Distribution ....................... FAILURE [ 0.084 s] [INFO] Distribution ....................................... SKIPPED [INFO] Cytoscape Project POM .............................. SUCCESS [ 0.021 s] [INFO] ------------------------------------------------------------------------ [INFO] BUILD FAILURE [INFO] ------------------------------------------------------------------------ [INFO] Total time: 8.887 s [INFO] Finished at: 2021-06-29T01:14:00Z [INFO] ------------------------------------------------------------------------ [ERROR] Failed to execute goal on project taglets: Could not resolve dependencies for project org.cytoscape:taglets:jar:3.6.1: Cannot access maven-default-http-blocker (http://0.0.0.0/) in offline mode and the artifact org.mockito:mockito-all:jar:1.8.1 has not been downloaded from it before. -> [Help 1] [ERROR] Failed to execute goal on project event-api: Could not resolve dependencies for project org.cytoscape:event-api:bundle:3.6.1: Cannot access maven-default-http-blocker (http://0.0.0.0/) in offline mode and the artifact org.mockito:mockito-all:jar:1.10.19 has not been downloaded from it before. -> [Help 1] [ERROR] Failed to execute goal on project service-api: Could not resolve dependencies for project org.cytoscape:service-api:bundle:3.6.1: Cannot access maven-default-http-blocker (http://0.0.0.0/) in offline mode and the artifact org.mockito:mockito-all:jar:1.10.19 has not been downloaded from it before. -> [Help 1] [ERROR] Failed to execute goal on project work-api: Could not resolve dependencies for project org.cytoscape:work-api:bundle:3.6.1: Cannot access maven-default-http-blocker (http://0.0.0.0/) in offline mode and the artifact org.mockito:mockito-all:jar:1.10.19 has not been downloaded from it before. -> [Help 1] [ERROR] Failed to execute goal on project swing-util-api: Could not resolve dependencies for project org.cytoscape:swing-util-api:bundle:3.6.1: Cannot access maven-default-http-blocker (http://0.0.0.0/) in offline mode and the artifact org.mockito:mockito-all:jar:1.10.19 has not been downloaded from it before. -> [Help 1] [ERROR] Failed to execute goal on project cy-commons-cli: Could not resolve dependencies for project org.cytoscape:cy-commons-cli:bundle:3.6.1: Cannot access maven-default-http-blocker (http://0.0.0.0/) in offline mode and the artifact org.apache.commons:com.springsource.org.apache.commons.lang:jar:2.4.0 has not been downloaded from it before. -> [Help 1] [ERROR] Failed to execute goal on project integration-test-support: Could not resolve dependencies for project org.cytoscape:integration-test-support:bundle:3.6.1: Cannot access maven-default-http-blocker (http://0.0.0.0/) in offline mode and the artifact org.easymock:easymock:jar:3.0 has not been downloaded from it before. -> [Help 1] [ERROR] Failed to execute goal on project third-party: Could not resolve dependencies for project org.cytoscape.distribution:third-party:bundle:3.6.1: The following artifacts could not be resolved: cytoscape-temp:l2fprod-common-sheet:jar:7.3, com.lowagie:itext:jar:2.0.8, cytoscape-temp:org.swinglabs.swingx:jar:1.6.1, cytoscape-temp:l2fprod-common-shared:jar:7.3, cytoscape-temp:l2fprod-common-fontchooser:jar:7.3, net.sf.opencsv:opencsv:jar:2.1, cytoscape-sun:jhall:jar:1.0, cytoscape-temp:parallelcolt:jar:0.9.4, org.freehep:freehep-graphicsio:jar:2.4, org.freehep:freehep-graphics2d:jar:2.4, org.freehep:freehep-graphicsbase:jar:2.4, junit:junit:jar:4.10, org.freehep:freehep-graphicsio-ps:jar:2.4, org.freehep:freehep-graphicsio-pdf:jar:2.4, org.freehep:freehep-graphicsio-svg:jar:2.4, org.freehep:freehep-graphicsio-java:jar:2.4, cytoscape-temp:jfree-jfreechart:jar:1.0.13, cytoscape-temp:jfree-jcommon:jar:1.0.15, cytoscape-temp:violinstrings:jar:1.0.2, cytoscape-temp:jigsaw:jar:2.2.6, cyto scape-temp:stax2-api:jar:3.0.1, cytoscape-temp:staxmate:jar:2.0.0, cytoscape-temp:woodstox-core-lgpl:jar:4.0.5, cytoscape-temp:xstream:jar:1.3.1, cytoscape-temp:collections-generic:jar:4.01, com.google.guava:guava:jar:22.0, psidev.psi.mi:psimitab:jar:1.7.9, psidev.psi.tools:xxindex:jar:0.11, psidev.psi.mi:psi25-xml:jar:1.7.10, com.fasterxml.jackson.core:jackson-core:jar:2.2.2, com.fasterxml.jackson.core:jackson-databind:jar:2.2.2, com.fasterxml.jackson.core:jackson-annotations:jar:2.2.2: Cannot access maven-default-http-blocker (http://0.0.0.0/) in offline mode and the artifact cytoscape-temp:l2fprod-common-sheet:jar:7.3 has not been downloaded from it before. -> [Help 1] [ERROR] Failed to execute goal on project karaf-launcher: Could not resolve dependencies for project org.cytoscape.distribution:karaf-launcher:jar:3.6.1: Cannot access maven-default-http-blocker (http://0.0.0.0/) in offline mode and the artifact com.apple.developer:AppleJavaExtensions:jar:1.6 has not been downloaded from it before. -> [Help 1] [ERROR] Failed to execute goal on project cytoscape: Could not resolve dependencies for project org.cytoscape.distribution:cytoscape:pom:3.6.1: Failed to collect dependencies at org.apache.karaf:apache-karaf:tar.gz:3.0.3 -> org.apache.karaf.features:framework:kar:3.0.3 -> org.ops4j.pax.logging:pax-logging-api:jar:1.8.1: Failed to read artifact descriptor for org.ops4j.pax.logging:pax-logging-api:jar:1.8.1: Cannot access maven-default-http-blocker (http://0.0.0.0/) in offline mode and the artifact org.sonatype.oss:oss-parent:pom:9 has not been downloaded from it before. -> [Help 1] [ERROR] [ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch. [ERROR] Re-run Maven using the -X switch to enable full debug logging. [ERROR] [ERROR] For more information about the errors and possible solutions, please read the following articles: [ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/DependencyResolutionException [ERROR] [ERROR] After correcting the problems, you can resume the build with the command [ERROR] mvn <args> -rf :taglets *** Error code 1 Stop. make: stopped in /usr/ports/biology/cytoscape
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