Date: Sat, 2 Mar 2024 19:30:33 GMT From: Nuno Teixeira <eduardo@FreeBSD.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org Subject: git: f246c2537108 - main - biology/minimap2: Move man pages to share/man Message-ID: <202403021930.422JUXa7015811@gitrepo.freebsd.org>
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The branch main has been updated by eduardo: URL: https://cgit.FreeBSD.org/ports/commit/?id=f246c253710829601f535edf81675b26f6b1755a commit f246c253710829601f535edf81675b26f6b1755a Author: Nuno Teixeira <eduardo@FreeBSD.org> AuthorDate: 2024-03-02 19:29:26 +0000 Commit: Nuno Teixeira <eduardo@FreeBSD.org> CommitDate: 2024-03-02 19:29:26 +0000 biology/minimap2: Move man pages to share/man Approved by: portmgr (blanket) --- biology/minimap2/Makefile | 1 + biology/minimap2/files/patch-Makefile.simde | 6 +++--- biology/minimap2/pkg-plist | 2 +- 3 files changed, 5 insertions(+), 4 deletions(-) diff --git a/biology/minimap2/Makefile b/biology/minimap2/Makefile index ff6799f92d2a..2ab83948882d 100644 --- a/biology/minimap2/Makefile +++ b/biology/minimap2/Makefile @@ -1,6 +1,7 @@ PORTNAME= minimap2 DISTVERSIONPREFIX= v DISTVERSION= 2.25 +PORTREVISION= 1 CATEGORIES= biology MAINTAINER= jwb@FreeBSD.org diff --git a/biology/minimap2/files/patch-Makefile.simde b/biology/minimap2/files/patch-Makefile.simde index 5d5e0ccf482c..faef217fbdab 100644 --- a/biology/minimap2/files/patch-Makefile.simde +++ b/biology/minimap2/files/patch-Makefile.simde @@ -1,4 +1,4 @@ ---- Makefile.simde.orig 2021-11-18 22:11:48 UTC +--- Makefile.simde.orig 2023-04-25 16:44:52 UTC +++ Makefile.simde @@ -1,13 +1,26 @@ -CFLAGS= -g -Wall -O2 -Wc++-compat #-Wextra @@ -21,7 +21,7 @@ LIBS= -lm -lz -lpthread +PREFIX?= /usr/local -+MAN1DIR?= ${PREFIX}/man/man1 ++MAN1DIR?= ${PREFIX}/share/man/man1 +DATADIR?= ${PREFIX}/share/minimap2 +MKDIR?= mkdir @@ -32,7 +32,7 @@ ifneq ($(arm_neon),) # if arm_neon is defined ifeq ($(aarch64),) #if aarch64 is not defined CFLAGS+=-D_FILE_OFFSET_BITS=64 -mfpu=neon -fsigned-char -@@ -26,7 +39,7 @@ ifneq ($(tsan),) +@@ -26,7 +39,7 @@ endif LIBS+=-fsanitize=thread endif diff --git a/biology/minimap2/pkg-plist b/biology/minimap2/pkg-plist index 1d11d4c99c2f..742d1eb1b3f7 100644 --- a/biology/minimap2/pkg-plist +++ b/biology/minimap2/pkg-plist @@ -1,7 +1,7 @@ bin/minimap2 bin/minimap2-lite bin/sdust -man/man1/minimap2.1.gz +share/man/man1/minimap2.1.gz %%DATADIR%%/test/MT-human.fa %%DATADIR%%/test/MT-orang.fa %%DATADIR%%/test/q-inv.fa
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